BAC Information

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BAC

Clone NameB6Ng01-287M23
Chromosome2 (Build37)
Map Location 99,101,695 - 99,102,655
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042886
Downstream geneLOC621386, LOC668702
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287M23.bB6Ng01-287M23.g
ACCGA085633GA085634
length1,201971
definitionB6Ng01-287M23.b B6Ng01-287M23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttgatcaggatggatgattgtt
ttgatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atctatattcatgagaaattggtctgaagttctctatctttgtttgatct
ttctgtggtttaggtatcagagtaataaaatgagttgggtagagtacctt
ctacttctattttgtgaaatagtttgtgtagaactggaattagatcttct
ttgaaggtctgatagaactctgcactaaacccatctggtcctgggctttt
tttggctgggagactattaataactgcttctatttctttaggggatatgg
gactgtttagatggtcaacttgatcctgaatcaactttggtacctggtat
ctgtccagaaatttgtccatttcgtccaggttttccagttttgttgagta
tagccttttttagaaggatctgatggtgttttggatttcttcaggatctg
ttgttatgtctccctattcatttctgattttgttaattagaattttttcc
ctctgccctctagtgagtctagctaagggtttatctatcttgttgatttt
ctcaaagaaccaactcctcatttggttaattctttgaatagttcttgttt
ccacttggttgatttcacccctgagtttgattatttcctgccgtctactc
ctcttgggtgaatttgcttccttttttctagagcttttagatgtgttgtc
aagctactagtatgtgctgtctcccgtttcttcttgggagcacctcagag
ctatgagtttcccttcttagaatgctttcattgtgtcccataggtttggg
tatgttgtggctcattttcataaactctaaaagtctttatttgtttctta
tccttccttgacagtatcactgaaaagagataattgtcagttccctatgt
cgctttcatatagtggtataaagatcagctaggcatgttgactggaatgg
aacattgcaattccaatttgatcatgaggccggtttttgacactttattg
c
gaattccataataaagaacctatatgtcaacagtaatgtcataaacttat
gtgacaatactgcagacaaaagatatacaaattcaaatgttctgatgtaa
tgcataattttcagagtaatgaatagctgatcttagataaaacaaagtaa
tgtacagctggagagttggttcagcagtcagactacttcttgctttcgca
gattatacaggtgatacaggtttaatttctggtgtccacatattggtccc
agtcattcaataactttaggtccaggatatctgatgctctcttcggagtt
acacaggtacgaggcataaacttggtgggtaggtgaatgcatacaaacac
acacacacacacacacacacacacacacacacagagagagagagagagag
agagagagagagagagagagagcaagagggggagagaggaagagagtttg
aaggccaaatattcatgcacatgataaagtaaaacaaaataaacatacaa
tgtgaatagttctggaagtgaaattttagttaaaacattctttaaaatgt
gaatcataagttcttacaattgcttatggtagattctagaataatattta
agaaaaaatgaattctgtgtaacattttcttcagtataaaagataacttt
tctttttttaatgatatcacttcagtgctgatggcaaaataagattcagt
cattataataaaattaaagaatatatccccaaggagagatgatgcaatta
ccctaatacaatgatattaaaggggaatatggcaatgtctaaatatcaac
tacagcaaaaatgtgtttattttcagaatactagaacaattcaacatttg
aaaatcatatagtacaccctgcccatccctaagaaattaagaaatagaaa
gcatatcaacattaacagaaatgggaaaattaccttaataagcatcaaaa
tgcatgaaatcataaaacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99101695_99102655
seq2: B6Ng01-287M23.g_65_1035

seq1  GAATTCCATAATAAAGAACCTATATGTCAACAGTAATGTCATAAACTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATAAAGAACCTATATGTCAACAGTAATGTCATAAACTTAT  50

seq1  GTGACAATACTGCAGACAAAAGATATACAAATTCAAATGTTCTGATGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAATACTGCAGACAAAAGATATACAAATTCAAATGTTCTGATGTAA  100

seq1  TGCATAATTTTCAGAGTAATGAATAGCTGATCTTAGATAAAACAAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATTTTCAGAGTAATGAATAGCTGATCTTAGATAAAACAAAGTAA  150

seq1  TGTACAGCTGGAGAGTTGGTTCAGCAGTCAGACTACTTCTTGCTTTCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGCTGGAGAGTTGGTTCAGCAGTCAGACTACTTCTTGCTTTCGCA  200

seq1  GATTATACAGGTGATACAGGTTTAATTTCTGGTGTCCACATATTGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATACAGGTGATACAGGTTTAATTTCTGGTGTCCACATATTGGTCCC  250

seq1  AGTCATTCAATAACTTTAGGTCCAGGATATCTGATGCTCTCTTCGGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCAATAACTTTAGGTCCAGGATATCTGATGCTCTCTTCGGAGTT  300

seq1  ACACAGGTACGAGGCATAAACTTGGTGGGTAGGTGAATGCATACAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTACGAGGCATAAACTTGGTGGGTAGGTGAATGCATACAAACAC  350

seq1  ACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAG  400

seq1  AGAGAGAGAGAGAGAGAGAGAGCAAGAGGGGGAGAGAGGAAGAGAGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGCAAGAGGGGGAGAGAGGAAGAGAGTTTG  450

seq1  AAGGCCAAATATTCATGCACATGATAAAGTAAAACAAAATAAACATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAATATTCATGCACATGATAAAGTAAAACAAAATAAACATACAA  500

seq1  TGTGAATAGTTCTGGAAGTGAAATTTTAGTTAAAACATTCTTTAAAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATAGTTCTGGAAGTGAAATTTTAGTTAAAACATTCTTTAAAATGT  550

seq1  GAATCATAAGTTCTTACAATTGCTTATGGTAGATTCTAGAATAATATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATAAGTTCTTACAATTGCTTATGGTAGATTCTAGAATAATATTTA  600

seq1  AGAAAAAATGAATTCTGTGTAACATTTTCTTCAGTATAAAAGATAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAATGAATTCTGTGTAACATTTTCTTCAGTATAAAAGATAACTTT  650

seq1  TC-TTTTTTAATGATATCACTTCAGTGCTGATGGCAAAATAAGATTCAGT  699
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTAATGATATCACTTCAGTGCTGATGGCAAAATAAGATTCAGT  700

seq1  CATTATAATAAAATTAAAGAATATATCCCCAAGGAGAGATGATGCAATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAATAAAATTAAAGAATATATCCCCAAGGAGAGATGATGCAATTA  750

seq1  CCCTAATACAATGATATT-AAGGGGAATATGGCAATGTCTAAATATCAAC  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCTAATACAATGATATTAAAGGGGAATATGGCAATGTCTAAATATCAAC  800

seq1  TACAGCAAAAATGTGTTTA-TTTCAGAATACTAGAACAATTCAACATTTG  847
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TACAGCAAAAATGTGTTTATTTTCAGAATACTAGAACAATTCAACATTTG  850

seq1  AAAATCATATAGTACA-CCTG-CCAT-CCTAAGAAATTAAGAAATAGAAA  894
      |||||||||||||||| |||| |||| |||||||||||||||||||||||
seq2  AAAATCATATAGTACACCCTGCCCATCCCTAAGAAATTAAGAAATAGAAA  900

seq1  GCATATC-ACATTAACAGAAAT-GGAAAATTA-CTTAATAAGCATCAAAA  941
      ||||||| |||||||||||||| ||||||||| |||||||||||||||||
seq2  GCATATCAACATTAACAGAAATGGGAAAATTACCTTAATAAGCATCAAAA  950

seq1  TGCATG-AATCATAAAACCTC  961
      |||||| ||||||||||||||
seq2  TGCATGAAATCATAAAACCTC  971