BAC Information

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BAC

Clone NameB6Ng01-287O12
Chromosome2 (Build37)
Map Location 6,919,629 - 6,920,691
singlet/doubletsinglet
Overlap genenone
Upstream geneUpf2, LOC100040343, 5430407P10Rik, LOC634939, Echdc3, 1700014B07Rik, Usp6nl, LOC100040387, Cugbp2, LOC100040659
Downstream geneLOC100040648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287O12.bB6Ng01-287O12.g
ACCGA085707GA085708
length1,054914
definitionB6Ng01-287O12.b B6Ng01-287O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactccccctcccccctgtattgcaggtaagcatagtgagcaagc
tatgggatccccctgcctctgtctccaatagaatactggcacatctggct
tcaattagttatgtgtgcttaccctctgagccatctcccaagcctcattc
tcaaataatgtttgagaattggcatctaccattgatgacttagtcttttt
ccttatatttttgcactctgaagaaacatttaatgtagtatgagacagat
acttacacacaatctttaaagagccactgagtaattaccatgtgaggtgt
cacctcagaggtagaaagggcaacaataaataagctagacatacatgcat
atgtgcataatcataagcgaaaggactaagtgtccccaattcagctattg
tgtaaaaatgacaggacttagaagtttgagttgtattgggaaagtgctgc
agagaaggcaggcctttgtatggctcttcttttgtttaggtttcctaagg
tcagtaaaacatgagtcagtggctgtggtcatgtaaatatgagacaaatc
tagaaatagtaggtgtggtgatttgaatatgtttggcccagagagtggca
ctattaggtattgccttgttgaagtggatgtggccttgttggaggaagta
tgccactgtgggggtgggctttaagaccctcttcctagcctcttggaaca
tagtctgcttctggcttcctttggatgaagatgtagaactctcagctcct
ccagtgctgtgcctacctggacagtgcaatgctttctgccctgaatatag
aatagactgaaccacagaacctgtagaccatccccaattaaacactgccc
tttataagagttgccttggtcatagtgttgctccaaagcaatgggaagtt
taattcagaagttggtaccagggactggggtattgctgtgataggcctga
caaagctgctgcttgagatgtagatcttgagactttggatttggaaagtg
gtggaatggtttagagggctatggatcatctagtaagactagatgtgtta
ctga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccgcctcacaccagtcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtatggcggttcctca
gaaaattggacatagtactaccggagaatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttaagaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
tataaacctaagagatacatccaagcatttctgcagtttgctggctcgta
ttgttttggttcacagaattgtgcctatgtaacagaagaattaaaggaga
agaaagaaagtttgctgcttctcacaattcatagtagcccaaatatatgt
agactatcacttttgtagggtttgtagactaaagtgttataataataata
acactagaaatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_6919629_6920691
seq2: B6Ng01-287O12.b_49_1102

seq1  GAATTCACTCCCCCTCCCCCCTGTATTGCAGGTAAGCATAGTGAGCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCCCCTCCCCCCTGTATTGCAGGTAAGCATAGTGAGCAAGC  50

seq1  TATGGGATCCCCCTGCCTCTGTCTCCAATAGAATACTGGCACATCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGATCCCCCTGCCTCTGTCTCCAATAGAATACTGGCACATCTGGCT  100

seq1  TCAATTAGTTATGTGTGCTTACCCTCTGAGCCATCTCCCAAGCCTCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAGTTATGTGTGCTTACCCTCTGAGCCATCTCCCAAGCCTCATTC  150

seq1  TCAAATAATGTTTGAGAATTGGCATCTACCATTGATGACTTAGTCTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATGTTTGAGAATTGGCATCTACCATTGATGACTTAGTCTTTTT  200

seq1  CCTTATATTTTTGCACTCTGAAGAAACATTTAATGTAGTATGAGACAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATATTTTTGCACTCTGAAGAAACATTTAATGTAGTATGAGACAGAT  250

seq1  ACTTACACACAATCTTTAAAGAGCCACTGAGTAATTACCATGTGAGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACACACAATCTTTAAAGAGCCACTGAGTAATTACCATGTGAGGTGT  300

seq1  CACCTCAGAGGTAGAAAGGGCAACAATAAATAAGCTAGACATACATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGAGGTAGAAAGGGCAACAATAAATAAGCTAGACATACATGCAT  350

seq1  ATGTGCATAATCATAAGCGAAAGGACTAAGTGTCCCCAATTCAGCTATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATAATCATAAGCGAAAGGACTAAGTGTCCCCAATTCAGCTATTG  400

seq1  TGTAAAAATGACAGGACTTAGAAGTTTGAGTTGTATTGGGAAAGTGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATGACAGGACTTAGAAGTTTGAGTTGTATTGGGAAAGTGCTGC  450

seq1  AGAGAAGGCAGGCCTTTGTATGGCTCTTCTTTTGTTTAGGTTTCCTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGCAGGCCTTTGTATGGCTCTTCTTTTGTTTAGGTTTCCTAAGG  500

seq1  TCAGTAAAACATGAGTCAGTGGCTGTGGTCATGTAAATATGAGACAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAACATGAGTCAGTGGCTGTGGTCATGTAAATATGAGACAAATC  550

seq1  TAGAAATAGTAGGTGTGGTGATTTGAATATGTTTGGCCCAGAGAGTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAGTAGGTGTGGTGATTTGAATATGTTTGGCCCAGAGAGTGGCA  600

seq1  CTATTAGGTATTGCCTTGTTGAAGTGGATGTGGCCTTGTTGGAGGAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGGTATTGCCTTGTTGAAGTGGATGTGGCCTTGTTGGAGGAAGTA  650

seq1  TGCCACTGTGGGGGTGGGCTTTAAGACCCTCTTCCTAGCCTCTTGGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGTGGGGGTGGGCTTTAAGACCCTCTTCCTAGCCTCTTGGAACA  700

seq1  TAGTCTGCTTCTGGCTTCCTTTGGATGAAGATGTAGAACTCTCAGCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCTTCTGGCTTCCTTTGGATGAAGATGTAGAACTCTCAGCTCCT  750

seq1  CCAGTGCTGTGCCTACCTGGACAGTGCAATGCTTTCTGCCCTGAATATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTGTGCCTACCTGGACAGTGCAATGCTTTCTGCCCTGAATATAG  800

seq1  AATAGACTGAACCACAGAACCTGTAGACCATCCCCAATTAAACACTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACTGAACCACAGAACCTGTAGACCATCCCCAATTAAACACTGCCC  850

seq1  TTTATAAGAGTTGCCTTGGTCATAGTGTTGCTCCAAAGCAATGGGAAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGAGTTGCCTTGGTCATAGTGTTGCTCCAAAGCAATGGGAAGTT  900

seq1  TAATTCAGAAGTTGGTACCAGGGACTGGGGTATTGCTGTGATAGGCCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAGAAGTTGGTACCAGGGACTGGGGTATTGCTGTGATAGGCCTGA  950

seq1  CAAAGCTGCTGCTTGGAGGATGTAGATCTTGAGACTTTGAATTTGGAAAG  1000
      |||||||||||||||   ||||||||||||||||||||| ||||||||||
seq2  CAAAGCTGCTGCTTG--AGATGTAGATCTTGAGACTTTGGATTTGGAAAG  998

seq1  TGGTGGAATGGTTTAAGAGGGGCCTAATGGATCATCTTAGTAAGACTAAG  1050
      |||||||||||||| ||||||  || |||||||||| |||||||||| ||
seq2  TGGTGGAATGGTTT-AGAGGG--CT-ATGGATCATC-TAGTAAGACT-AG  1042

seq1  ATGGTGGTACTGA  1063
      || ||| ||||||
seq2  AT-GTGTTACTGA  1054


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