BAC Information

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BAC

Clone NameB6Ng01-288P08
Chromosome2 (Build37)
Map Location 21,892,080 - 21,893,199
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288P08.bB6Ng01-288P08.g
ACCGA086487GA086488
length1,2231,130
definitionB6Ng01-288P08.b B6Ng01-288P08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgtgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggtggcacacatgcgattgctcacagcacgtacc
ggctttccacatctccccctttttattttattaaaatttaaggctgatct
aggcctgtgtaattatgcccatctgctgtggctcctgtcttaggtcgttc
ctccaatgtcacaacctttcctgtcatagggtaaccctatcgccactggg
ccccgagtcttaggttgatctgtgcatgaggaaagttgcccgtccctgga
taccgcagtgctatgtgacattaactactaaatgacctagggcgaactct
ataaaagaggccagccaccaatgtcaattaatttttgagcatagatagcc
agatttcaggggaggccccttgctcgatggcagcaagtgcttgagttatc
acaaccttgtcacgtgtttgttgggttctgagcttgcaaaccaaccagag
catgaccacaagtccacagcaggtggcaacgccaaataaacctaccctca
cccattccttaaaataagaaaaggcagatgaaatccaggaggagaggccc
tctgtcaatgacaggtccactcgtgtcgagttgatctttagaacggccgc
tctcagggcctcaagggtctcatcgaatctttcagaccagtttcctgcaa
gatataaagaaagctgtctagacagattagctgcataagtaaaattttca
tattggacactggtaatgcacagagcttccagtttttctttcacaaccca
actgggccatctggtatagaacacctatctgtttcctccgccaggtcaag
ggtgctgattcaaaatcatcagccctccctttaacttggtactagcagaa
gttttggacagtgatgggcatcagccagatctgctgaaagctgattttaa
ttttggtgccctgattgaaccgcactaaaccatagcgtacccctgcagct
ggtagcagcagctgcactggcttgaaattgctatggatcacggcagccag
taatgccaaaaatctctctcttttggtcgaaccattagaataagggtggg
aagggtgtttctacggaacagggaatctaaacgtgtgtgtatcgcgtggg
ccacacacatgtgatcacacccg
gaattcttactgctatattatattcaaggacagcttctttgagctaaaca
ggactccctgggaacctaatggaacacactgtataatttaggcaagacct
cagctgaacgatatgtttgcacacttattttattttatttttatatttta
taatgtgactgtacttgatgtcctgcttgggtaattaaaaataaagtgat
gaattattttacatatttaaaatgcattatctctgagcttatgctataag
cctcaagtaagtttctgtgactctggaagctaacacacatatacattaca
aaaacagttggggtaaaatatggtgcatgtcttaggtggttaaaatgaaa
gacagatgagtccttagattatcctctgaatgcctctagtcaaatttgtc
agtttgctgggaaaattgttgagtcacctacttgagccaaaatgatcaac
tgaatttttagaactttcaaagaccaaagccatggagagatgtgggtaaa
taattactgagtgagtgttcgttgaggctctgtcattgtaaaatcctgaa
gctgaagctgctcctctgtcctgtatgtagcacagatgaggttgcacagt
tagggtgtggttagcattaagtaatgaaaagtgtctactcagtatgagtg
acattatgagagagagagacagagagagagagagagagaggggataaaga
ggagagatcaactcagaactcaggcatactgttctaaaaagcaaaacaaa
aatctcagattatactgtcctatccacttcataaaatccaggtgccacta
aggccgaggataccaaatatgtatcaggtacagaatcatagaagcagaga
gacatttaccacctgtctctgtccattagcatcatccacagataggaagg
cagatggtaccccatgaagagctccaagatcatgtcatttacaagcagac
ggaagagaactaggatcttctcacttctagaccattttcatttgactgca
acacactgtttcctcggtataaaatgttagaatccaaattcatttttatt
tattgtatctagtcttaggattgggcctaatttgagcatgggaaatgagc
ctaggttgaagagagatgtaaacatcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21892080_21893199
seq2: B6Ng01-288P08.g_73_1202 (reverse)

seq1  GTGTGCTGTTTACCATCTCTCT--CACCTAGGCTCATTTTCCATGCTC-A  47
      ||||| |||||| |||||||||   |||||||||||||| |||||||| |
seq2  GTGTGATGTTTA-CATCTCTCTTCAACCTAGGCTCATTTCCCATGCTCAA  49

seq1  ATTAGG-CCAAT-CTAAGACTAGATAC-ATAAAT-AAAATGAA-TTGGAT  92
      |||||| ||||| |||||||||||||| |||||| |||||||| ||||||
seq2  ATTAGGCCCAATCCTAAGACTAGATACAATAAATAAAAATGAATTTGGAT  99

seq1  TCT-ACATTTTATACCGA-GAAACAGTGTGTTGCAGTCAAATGAAAATGG  140
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTAACATTTTATACCGAGGAAACAGTGTGTTGCAGTCAAATGAAAATGG  149

seq1  TCTAGAAGTGAGAAGATCCTAGTTCTCTTCCGTCCTGC-TGTAAATGACA  189
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  TCTAGAAGTGAGAAGATCCTAGTTCTCTTCCGT-CTGCTTGTAAATGACA  198

seq1  TGATCTTGGAGCTCTTCATGGGGTACCATCTGCCTCCTTATCTGTGGATG  239
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  TGATCTTGGAGCTCTTCATGGGGTACCATCTGCCTTCCTATCTGTGGATG  248

seq1  ATGCTAATGGACAGAGACAGGTGGT-AATGTCTCTCTGCTTCTATGATTC  288
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGCTAATGGACAGAGACAGGTGGTAAATGTCTCTCTGCTTCTATGATTC  298

seq1  TGTACCTGATACATATTTGGTATCCTCGGCCTTAGTGGCACCTGGATTTT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTGATACATATTTGGTATCCTCGGCCTTAGTGGCACCTGGATTTT  348

seq1  ATGAAGTGGATAGGACAGTATAATCTGAGATTTTTGTTTTGCTTTTTAGA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGGATAGGACAGTATAATCTGAGATTTTTGTTTTGCTTTTTAGA  398

seq1  ACAGTATGCCTGAGTTCTGAGTTGATCTCTCCTCTTTATCCCCTCTCTCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGCCTGAGTTCTGAGTTGATCTCTCCTCTTTATCCCCTCTCTCT  448

seq1  CTCTCTCTCTCTGTCTCTCTCTCTCATAATGTCACTCATACTGAGTAGAC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTGTCTCTCTCTCTCATAATGTCACTCATACTGAGTAGAC  498

seq1  ACTTTTCATTACTTAATGCTAACCACACCCTAACTGTGCAACCTCATCTG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCATTACTTAATGCTAACCACACCCTAACTGTGCAACCTCATCTG  548

seq1  TGCTACATACAGGACAGAGGAGCAGCTTCAGCTTCAGGATTTTACAATGA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATACAGGACAGAGGAGCAGCTTCAGCTTCAGGATTTTACAATGA  598

seq1  CAGAGCCTCAACGAACACTCACTCAGTAATTATTTACCCACATCTCTCCA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTCAACGAACACTCACTCAGTAATTATTTACCCACATCTCTCCA  648

seq1  TGGCTTTGGTCTTTGAAAGTTCTAAAAATTCAGTTGATCATTTTGGCTCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGGTCTTTGAAAGTTCTAAAAATTCAGTTGATCATTTTGGCTCA  698

seq1  AGTAGGTGACTCAACAATTTTCCCAGCAAACTGACAAATTTGACTAGAGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTGACTCAACAATTTTCCCAGCAAACTGACAAATTTGACTAGAGG  748

seq1  CATTCAGAGGATAATCTAAGGACTCATCTGTCTTTCATTTTAACCACCTA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGAGGATAATCTAAGGACTCATCTGTCTTTCATTTTAACCACCTA  798

seq1  AGACATGCACCATATTTTACCCCAACTGTTTTTGTAATGTATATGTGTGT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGCACCATATTTTACCCCAACTGTTTTTGTAATGTATATGTGTGT  848

seq1  TAGCTTCCAGAGTCACAGAAACTTACTTGAGGCTTATAGCATAAGCTCAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCCAGAGTCACAGAAACTTACTTGAGGCTTATAGCATAAGCTCAG  898

seq1  AGATAATGCATTTTAAATATGTAAAATAATTCATCACTTTATTTTTAATT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGCATTTTAAATATGTAAAATAATTCATCACTTTATTTTTAATT  948

seq1  ACCCAAGCAGGACATCAAGTACAGTCACATTATAAAATATAAAAATAAAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCAGGACATCAAGTACAGTCACATTATAAAATATAAAAATAAAA  998

seq1  TAAAATAAGTGTGCAAACATATCGTTCAGCTGAGGTCTTGCCTAAATTAT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGTGTGCAAACATATCGTTCAGCTGAGGTCTTGCCTAAATTAT  1048

seq1  ACAGTGTGTTCCATTAGGTTCCCAGGGAGTCCTGTTTAGCTCAAAGAAGC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTGTTCCATTAGGTTCCCAGGGAGTCCTGTTTAGCTCAAAGAAGC  1098

seq1  TGTCCTTGAATATAATATAGCAGTAAGAATTC  1120
      ||||||||||||||||||||||||||||||||
seq2  TGTCCTTGAATATAATATAGCAGTAAGAATTC  1130