BAC Information

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BAC

Clone NameB6Ng01-290E08
Chromosome2 (Build37)
Map Location 48,814,299 - 48,815,468
singlet/doubletsinglet
Overlap geneLOC100041508
Upstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l
Downstream geneMbd5, LOC100042719, LOC666709, LOC435666, Epc2, Kif5c, 2310010M24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290E08.bB6Ng01-290E08.g
ACCGA087452GA087453
length1,175634
definitionB6Ng01-290E08.b B6Ng01-290E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaagctaatcacattgtactttttgggaaagataagttaat
gaggataaggggaaatattaggttgtcatagaagggagagatttcaggta
aagacaaaccttccaatgagaagatgtctttggaaaatttggttttcttt
ttcttttttttgcaaatttggtttttaagtattattttgttgtggctagt
ttgtttttggagacagggtcttactctgtagtgcgtggaatttacagagc
tctgcccatctgtctaactctacttcacaaatgctgggactaaaggcatg
caccaccacacgcagcccaagagatttatttttaatacattaaaacaaat
attaaaattttaacgtgtaaaaacaaatggtaaagttcaaaataacctgg
aaaagtaaggatgagattagaaatggtatatatgtaaatttctggtttta
cttttttattccccaaacctaactcagaaaggaaataagcaggaaaatgg
gaggaaaataatttagtcaaagattaagaaaatgagtaatggtgcaataa
gcactagaatgtccattggcatcttaagctagtgtatctgggtattagtt
gggaatgaaacactgtagttcagatagttaagtatttccaagagtattac
atgttttgtttgcttattaaaattcatatcaaggttgattcttgagagca
gttatgatgtatacttctgtcttagttagggttacagacaccatgaccaa
ggcaagtcttataaaaacaacatttaattggggctggcttacaggttcag
aggttcagtccattatcatcaaggtgggagcatggcagtatccaggcaga
catggcacaggaggagctgagagttctatgtcttcatccaaaggctgcta
gtggaagactgacttccagacaactagggtgaggatcttaagcccacacc
cacagtgacacacctactccaaccaggtcacacctccaaatggtgccact
cccttggcccagaatatacaaaccatcacatttccacctccctatcccca
tagacttgttcaaacacatgagtctttgggggccaatattaaacataaca
ttattgcaaaatggcaattaagtccaacttcagtcctcataggtctacag
ccagtctcaccaatggttgaaaaat

gaattctgtgattttttttccattgtatatttttggtgtctctgtcaaag
atcaaatgtccatatgtagttggttttatttctggatcttcagttctatt
ccactgatcaacatgtctgtctctgtaccaataccatgcagtttttatca
ctctattttattgttctattttaaagcttgaggaaagggatggtgatttc
cccagccattctttcattacagaattgtttttgccctgtgttccatccaa
tagatgtgagcatccacttatgtatttgccaggcactggcctagcctcac
atgagacagctagctataccagggtcctgtcagcaaaatcttgctggcat
atgcaatagtgtctgtgtttggtggctgatcatgggatggatccccaatg
gaggatctaagaaaattacccaaggagctgaaggggtcagcaaccctata
ggtggaacaacaatacgaactaaccagtacaccccggagcttgtgtctct
agctgcatatgtattagaaaatggcctagtcggccatcattgggaaaaaa
ggccacttggtcatgcaaactttatatgcctcagtacaggggaacagcag
agccaagaaatgggagtgggtgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48814299_48815468
seq2: B6Ng01-290E08.b_45_1219

seq1  GAATTCCATAAAGCTAATCACATTGTACTTTTTGGGAAAGATAAGTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAGCTAATCACATTGTACTTTTTGGGAAAGATAAGTTAAT  50

seq1  GAGGATAAGGGGAAATATTAGGTTGTCATAGAAGGGAGAGATTTCAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAGGGGAAATATTAGGTTGTCATAGAAGGGAGAGATTTCAGGTA  100

seq1  AAGACAAACCTTCCAATGAGAAGATGTCTTTGGAAAATTTGGTTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAACCTTCCAATGAGAAGATGTCTTTGGAAAATTTGGTTTTCTTT  150

seq1  TTCTTTTTTTTGCAAATTTGGTTTTTAAGTATTATTTTGTTGTGGCTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTGCAAATTTGGTTTTTAAGTATTATTTTGTTGTGGCTAGT  200

seq1  TTGTTTTTGGAGACAGGGTCTTACTCTGTAGTGCGTGGAATTTACAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGGAGACAGGGTCTTACTCTGTAGTGCGTGGAATTTACAGAGC  250

seq1  TCTGCCCATCTGTCTAACTCTACTTCACAAATGCTGGGACTAAAGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCATCTGTCTAACTCTACTTCACAAATGCTGGGACTAAAGGCATG  300

seq1  CACCACCACACGCAGCCCAAGAGATTTATTTTTAATACATTAAAACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACACGCAGCCCAAGAGATTTATTTTTAATACATTAAAACAAAT  350

seq1  ATTAAAATTTTAACGTGTAAAAACAAATGGTAAAGTTCAAAATAACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTTAACGTGTAAAAACAAATGGTAAAGTTCAAAATAACCTGG  400

seq1  AAAAGTAAGGATGAGATTAGAAATGGTATATATGTAAATTTCTGGTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGGATGAGATTAGAAATGGTATATATGTAAATTTCTGGTTTTA  450

seq1  CTTTTTTATTCCCCAAACCTAACTCAGAAAGGAAATAAGCAGGAAAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATTCCCCAAACCTAACTCAGAAAGGAAATAAGCAGGAAAATGG  500

seq1  GAGGAAAATAATTTAGTCAAAGATTAAGAAAATGAGTAATGGTGCAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAATAATTTAGTCAAAGATTAAGAAAATGAGTAATGGTGCAATAA  550

seq1  GCACTAGAATGTCCATTGGCATCTTAAGCTAGTGTATCTGGGTATTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGAATGTCCATTGGCATCTTAAGCTAGTGTATCTGGGTATTAGTT  600

seq1  GGGAATGAAACACTGTAGTTCAGATAGTTAAGTATTTCCAAGAGTATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGAAACACTGTAGTTCAGATAGTTAAGTATTTCCAAGAGTATTAC  650

seq1  ATGTTTTGTTTGCTTATTAAAATTCATATCAAGGTTGATTCTTGAGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGTTTGCTTATTAAAATTCATATCAAGGTTGATTCTTGAGAGCA  700

seq1  GTTATGATGTATACTTCTGTCTTAGTTAGGGTTACAGACACCATGACCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGATGTATACTTCTGTCTTAGTTAGGGTTACAGACACCATGACCAA  750

seq1  GGCAAGTCTTATAAAAACAACATTTAATTGGGGCTGGCTTACAGGTTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCTTATAAAAACAACATTTAATTGGGGCTGGCTTACAGGTTCAG  800

seq1  AGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGTATCCAGGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGTCCATTATCATCAAGGTGGGAGCATGGCAGTATCCAGGCAGA  850

seq1  CATGGCACAGGAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCACAGGAGGAGCTGAGAGTTCTATGTCTTCATCCAAAGGCTGCTA  900

seq1  GTGGAAGACTGACTTCCAGACAACTAGGGTGAGGATCTTAAGCCCACACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGACTGACTTCCAGACAACTAGGGTGAGGATCTTAAGCCCACACC  950

seq1  CACAGTGACACACCTACTCCAACCAGGTCACACCTCCAAATGGTGCCACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGACACACCTACTCCAACCAGGTCACACCTCCAAATGGTGCCACT  1000

seq1  CCCTGGCCCAAGAATATACAAACCATCACA-TTCCA-CTCCCTGGTCCCC  1048
      |||| | || |||||||||||||||||||| ||||| ||||||  |||||
seq2  CCCTTGGCCCAGAATATACAAACCATCACATTTCCACCTCCCT-ATCCCC  1049

seq1  ATAGACTTGTTCAAACACATGAGTCTTTGGGGGCCATATTTAAACATAAC  1098
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  ATAGACTTGTTCAAACACATGAGTCTTTGGGGGCCAATATTAAACATAAC  1099

seq1  A-TAATGCAAAATG--CATTTAGTCCAACTTTTAAAGTCCTCATA-GTCT  1144
      | || |||||||||   ||| ||||||||||    |||||||||| ||||
seq2  ATTATTGCAAAATGGCAATTAAGTCCAACTT---CAGTCCTCATAGGTCT  1146

seq1  ACAG-CAGTCTCAACAATG--TTAAAAAT  1170
      |||| |||||||| |||||  | ||||||
seq2  ACAGCCAGTCTCACCAATGGTTGAAAAAT  1175


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