BAC Information

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BAC

Clone NameB6Ng01-290O21
Chromosome2 (Build37)
Map Location 112,330,237 - 112,536,581
singlet/doubletdoublet
Overlap geneAven, Ryr3
Upstream geneOlfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5
Downstream gene4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290O21.bB6Ng01-290O21.g
ACCGA087947GA087948
length9231,165
definitionB6Ng01-290O21.b B6Ng01-290O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,330,237 - 112,331,131)(112,535,428 - 112,536,581)
sequence
gaattccaggacagccagggctacacagagaaaccctgtctcgaaaaacc
aaaaagttatttactactgcagaacaggacaggggagtgagggtgactac
aattaaagttttatatatatctgtgtccaaatattgtgacttggaaccct
caactctcttcttactaatggcattagtggcctgcccacctaaaacaaca
tatgtgggcatggccactgcctctcagagcctaacttcctcatttacatt
tgattgtaaaatcctaaatttcccatttcctagctgtcttcttggctctc
atttcctctcacaccctgaacatcgtggcctgaacttttctattgatttc
atgtctctgactagaacgtaaatctcttttacagattggtttctcaagag
ccttggagactttgaagctgagcgaccctgggtttgattcattccattag
ttactagctgtatggccagaaaagttatttaatatttgtgctttctttcg
tgtgagcttcagggaatccattcgaatctacttcccacagtcaaatagac
tcaagacaaatactgtcaatgaacagcttgtttccttcccggcctgcgta
ttccctagggtgggatccatttccctatccctggtcctgggacccatgac
cccttctctaactcccaagacgattggtctaagatttaaatgtacgacta
aagaaaagtttttctccctaaactccttaactttatcttttgctcataac
atccaggtgttctctcagaatctgcatccaggaaagcgacaaagcagtta
cccaccggtgctctggctcagcctcagagactgcttcaactggacctaca
cactcttatccccagatggtcccacaacctggacagcagtgaccagctct
tcccggactaggtcgacatccca
gaattcaaatctgggcttgctcttagtcaagtgataccaagaggaagtgc
tctgagttctgcccttaattcgacaccaatgcattattggtgatgctgcg
tttattattaatgcattgaaagaaatgcaggaagaaagttgggaagttga
ggtcataaagggaggtttatttttgcctccccttctaatctttttttggc
tcttttgttacctttgtctccttccacagtctttttcctaatcaagggat
gcccccttcttttccttgtgtccatggggagtggtttatctgatcagtcc
caaaagttgaagtctataagactttcaagaagggaaatgaaaagatttgc
cccatcttgggattttctgttcatttctcaatgtggatagagatttgaga
taggaaagtcttctttttccatagggtcatccttgaataaattctttcca
ccaaaatctgtccctgggctttcagtagagtggaggacagagagcagtat
agtctttagaatccagtagtatttttttcaaccaaaagaatcaagtgact
tggactgatggagtggaggagcagacagagatattgtcgtacctcatgtt
cctccacctagaaggataatgaatgcctataggctctaagcttgctctct
aaagccagagaaaactaatctttcatgtagcaacactttaagatatcaaa
gaaattctatttcccatcttcctcccattattttaaacctttgtacgtcc
ttcatccctatgggatggtggttgaatctccttttgaaatgacattttcc
attagtcagtgttgagctccgaagctggcaggatacacaaggaactctgg
ggcagatcagaatatgcagaacttgtgagcagaccagggtacatcagtgc
ccatctcctcttgcctagagacaagaagtcaagactgggttcaatcaagt
cttctaaaatagagcagtggtcttttttcccttctttctgggaaacccag
aaatgtgttgggacataaataatgacttgggccatctgactttaggtaaa
ataaatcattttagaaggctatccaaagtatgaagtacccctggtgcaat
ggtcaatctaagccgaggtccgtatggagtgagtcttgggtgaacgcttt
gaagaaggtcctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112330237_112331131
seq2: B6Ng01-290O21.b_45_939

seq1  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC  50

seq1  AAAAAGTTATTTACTACTGCAGAACAGGACAGGGGAGTGAGGGTGACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTATTTACTACTGCAGAACAGGACAGGGGAGTGAGGGTGACTAC  100

seq1  AATTAAAGTTTTATATATATCTGTGTCCAAATATTGTGACTTGGAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGTTTTATATATATCTGTGTCCAAATATTGTGACTTGGAACCCT  150

seq1  CAACTCTCTTCTTACTAATGGCATTAGTGGCCTGCCCACCTAAAACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCTTCTTACTAATGGCATTAGTGGCCTGCCCACCTAAAACAACA  200

seq1  TATGTGGGCATGGCCACTGCCTCTCAGAGCCTAACTTCCTCATTTACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGGCATGGCCACTGCCTCTCAGAGCCTAACTTCCTCATTTACATT  250

seq1  TGATTGTAAAATCCTAAATTTCCCATTTCCTAGCTGTCTTCTTGGCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTAAAATCCTAAATTTCCCATTTCCTAGCTGTCTTCTTGGCTCTC  300

seq1  ATTTCCTCTCACACCCTGAACATCGTGGCCTGAACTTTTCTATTGATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCTCACACCCTGAACATCGTGGCCTGAACTTTTCTATTGATTTC  350

seq1  ATGTCTCTGACTAGAACGTAAATCTCTTTTACAGATTGGTTTCTCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTGACTAGAACGTAAATCTCTTTTACAGATTGGTTTCTCAAGAG  400

seq1  CCTTGGAGACTTTGAAGCTGAGCGACCCTGGGTTTGATTCATTCCATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGACTTTGAAGCTGAGCGACCCTGGGTTTGATTCATTCCATTAG  450

seq1  TTACTAGCTGTATGGCCAGAAAAGTTATTTAATATTTGTGCTTTCTTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGCTGTATGGCCAGAAAAGTTATTTAATATTTGTGCTTTCTTTCG  500

seq1  TGTGAGCTTCAGGGAATCCATTCGAATCTACTTCCCACAGTCAAATAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTTCAGGGAATCCATTCGAATCTACTTCCCACAGTCAAATAGAC  550

seq1  TCAAGACAAATACTGTCAATGAACAGCTTGTTTCCTTCCCGGCCTGCGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAAATACTGTCAATGAACAGCTTGTTTCCTTCCCGGCCTGCGTA  600

seq1  TTCCCTAGGGTGGGATCCATTTCCCTATCCCTGGTCCTGGGACCCATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGGGTGGGATCCATTTCCCTATCCCTGGTCCTGGGACCCATGAC  650

seq1  CCCTTCTCTAACTCCCAAGACGATTGGTCTAAGATTTAAATGTACGACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCTAACTCCCAAGACGATTGGTCTAAGATTTAAATGTACGACTA  700

seq1  AAGAAAAGTTTTTCTCCCTAAACTCCTTAACTTTATCTTTTGCTCATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTTTTTCTCCCTAAACTCCTTAACTTTATCTTTTGCTCATAAC  750

seq1  ATCCAGGTGTTCTCTCAGAATCTGCATCCAGGAAAGCGACAAAGCAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTGTTCTCTCAGAATCTGCATCCAGGAAAGCGACAAAGCAGTTA  800

seq1  CCCACCGGTGCTCTGGCTCAGCCTCAGAGACTGCTTCAACTGGACCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCGGTGCTCTGGCTCAGCCTCAGAGACTGCTTCAACTGGACCTACA  850

seq1  CACTCTTATCCCCAGATGGTCCCACAACCTGGACAGCAGTGACCA  895
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTATCCCCAGATGGTCCCACAACCTGGACAGCAGTGACCA  895

seq1: chr2_112535428_112536581
seq2: B6Ng01-290O21.g_67_1231 (reverse)

seq1  GTGAGGA-CTTC-TCTCAGCG-TCACCACAAGACTTCACTCCATACGGGC  47
      ||||||| |||| ||  |||| ||||| |||||| ||||||||||||| |
seq2  GTGAGGACCTTCTTCAAAGCGTTCACC-CAAGAC-TCACTCCATACGGAC  48

seq1  CTCGGCCTAAGATGGCCACTGCA-CAGGGTTAACTTCAATTACTTTTGAT  96
      |||||| ||   || ||| |||| ||||| | ||||||  |||||| |||
seq2  CTCGGCTTAGATTGACCATTGCACCAGGGGT-ACTTCA--TACTTTGGAT  95

seq1  AG-CTTCTAAAATGGATTTTATTTTTTACCAAAAGTCAGATGG-CCAAGT  144
      || |||||||||| ||||   | ||||||| |||||||||||| ||||||
seq2  AGCCTTCTAAAAT-GATT---TATTTTACCTAAAGTCAGATGGCCCAAGT  141

seq1  TCATATTTATGT-CCAACACATTTCTGG--TTTCCAGAAAGAAGGG-AAA  190
         ||||||||| |||||||||||||||  || ||||||||||||| |||
seq2  CATTATTTATGTCCCAACACATTTCTGGGTTTCCCAGAAAGAAGGGAAAA  191

seq1  AAGACCACTGCTC--TTTTAG-AGACTTG-TTGAA-CCAGTCTTGACTTC  235
      |||||||||||||  |||||| ||||||| ||||| ||||||||||||||
seq2  AAGACCACTGCTCTATTTTAGAAGACTTGATTGAACCCAGTCTTGACTTC  241

seq1  -TGTCTCTAGGCAAGAGGAGATGGGCACTGATGTACCCTGGTCTGCTCAC  284
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTAGGCAAGAGGAGATGGGCACTGATGTACCCTGGTCTGCTCAC  291

seq1  AAGTTCTGCATATTCTGATCTG-CCCAGAGTT-CTTGTGTATCCTGCCAG  332
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  AAGTTCTGCATATTCTGATCTGCCCCAGAGTTCCTTGTGTATCCTGCCAG  341

seq1  CTTCGG-GCTCAACACTGACTAATGG-AAATGTCATTTCAAAAGGAGATT  380
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTCGGAGCTCAACACTGACTAATGGAAAATGTCATTTCAAAAGGAGATT  391

seq1  CAACCACCATCCCATAGGGATGAAGGACGTACAAAGGTTTAAAATAATGG  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCATCCCATAGGGATGAAGGACGTACAAAGGTTTAAAATAATGG  441

seq1  GAGGAAGATGGGAAATAGAATTTCTTTGATATCTTAAAGTGTTGCTACAT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGATGGGAAATAGAATTTCTTTGATATCTTAAAGTGTTGCTACAT  491

seq1  GAAAGATTAGTTTTCTCTGGCTTTAGAGAGCAAGCTTAGAGCCTATAGGC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATTAGTTTTCTCTGGCTTTAGAGAGCAAGCTTAGAGCCTATAGGC  541

seq1  ATTCATTATCCTTCTAGGTGGAGGAACATGAGGTACGACAATATCTCTGT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTATCCTTCTAGGTGGAGGAACATGAGGTACGACAATATCTCTGT  591

seq1  CTGCTCCTCCACTCCATCAGTCCAAGTCACTTGATTCTTTTGGTTGAAAA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCCACTCCATCAGTCCAAGTCACTTGATTCTTTTGGTTGAAAA  641

seq1  AAATACTACTGGATTCTAAAGACTATACTGCTCTCTGTCCTCCACTCTAC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTACTGGATTCTAAAGACTATACTGCTCTCTGTCCTCCACTCTAC  691

seq1  TGAAAGCCCAGGGACAGATTTTGGTGGAAAGAATTTATTCAAGGATGACC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCCCAGGGACAGATTTTGGTGGAAAGAATTTATTCAAGGATGACC  741

seq1  CTATGGAAAAAGAAGACTTTCCTATCTCAAATCTCTATCCACATTGAGAA  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAAAAAGAAGACTTTCCTATCTCAAATCTCTATCCACATTGAGAA  791

seq1  ATGAACAGAAAATCCCAAGATGGGGCAAATCTTTTCATTTCCCTTCTTGA  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGAAAATCCCAAGATGGGGCAAATCTTTTCATTTCCCTTCTTGA  841

seq1  AAGTCTTATAGACTTCAACTTTTGGGACTGATCAGATAAACCACTCCCCA  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTATAGACTTCAACTTTTGGGACTGATCAGATAAACCACTCCCCA  891

seq1  TGGACACAAGGAAAAGAAGGGGGCATCCCTTGATTAGGAAAAAGACTGTG  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACAAGGAAAAGAAGGGGGCATCCCTTGATTAGGAAAAAGACTGTG  941

seq1  GAAGGAGACAAAGGTAACAAAAGAGCCAAAAAAAGATTAGAAGGGGAGGC  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGACAAAGGTAACAAAAGAGCCAAAAAAAGATTAGAAGGGGAGGC  991

seq1  AAAAATAAACCTCCCTTTATGACCTCAACTTCCCAACTTTCTTCCTGCAT  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACCTCCCTTTATGACCTCAACTTCCCAACTTTCTTCCTGCAT  1041

seq1  TTCTTTCAATGCATTAATAATAAACGCAGCATCACCAATAATGCATTGGT  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAATGCATTAATAATAAACGCAGCATCACCAATAATGCATTGGT  1091

seq1  GTCGAATTAAGGGCAGAACTCAGAGCACTTCCTCTTGGTATCACTTGACT  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAATTAAGGGCAGAACTCAGAGCACTTCCTCTTGGTATCACTTGACT  1141

seq1  AAGAGCAAGCCCAGATTTGAATTC  1154
      ||||||||||||||||||||||||
seq2  AAGAGCAAGCCCAGATTTGAATTC  1165