BAC Information

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BAC

Clone NameB6Ng01-291A19
Chromosome2 (Build37)
Map Location 99,242,676 - 99,243,320
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042886
Downstream geneLOC621386, LOC668702, LOC100042907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291A19.bB6Ng01-291A19.g
ACCGA088039GA088040
length1,0681,190
definitionB6Ng01-291A19.b B6Ng01-291A19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacattcattctatcatggaggaattgagtccactgatgttgaca
actattagtgaccaatgattattctttcctgttattttgatgttagtgat
agtgtgtatgtgtgtttgtgtatgtattatctgtgtctgcatgtttctgt
ctccttgtgtgttgttgtgtgttctttgcttattttggttttgctggtat
ggaattatttatttcatttcttttccttgctgtagttaacctttttggtt
tagagttttcctcctcacattttctataaggcttatttgtgaataaagat
tgttttaacttggttttgctttggactattttgtttctacatctatggta
gttgacagtttttcaggatatagtagtctaggttggcatctgtggtttat
tagaggcactaagtcatatgttggggtccttctagcttttagagtctctg
tcgagaagtcaaaggtaattctgataagcctccctgttacttggcctttt
tcacttgaaatttttaatattctgtcttcgttttgtagattttgtatttt
aattggtatgtggtggagaattttcttttcttttccatctagttggtatt
ctgtaagcaccttttatgtgtgtaaacatctcttcttttaggttatagaa
ttttcttctatgattttaatggaaataatttgtggtctttggagctggga
ttcttcactttcttctattctcattattcttacattaggtcatttcatag
tatcttagacttcctggatgttttgtgtcagaaattttaaaatataacat
tttagtttcattggtatatcaatttctttactgtatattctatgcctgag
attttctcttccatctcttgtatctgtttgtgatacttgtgtctgtagtc
tactctactataggtttacaggtgaacccaacctggatgttggctagatc
ggcaagtcctctggcaggttgcctggaatatgggaactcaggggcaatgc
acatccttatagcaaagtggtgtatagttcagaagcacttatgctatggg
acctgtagaggagagaaa

gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtacgcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaaggcagggcgga
ttctagatgaaattcagggcaatctatcagaagtaaagcggggagagaga
gtaggagcaaagagaaaatatggtacacaaaataagtatacaggcctttc
cacgggtcttgaacccgaggaaaagtttaggtcaggtaagaatacctggg
gagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcgatta
gcggaggtctctaggagatactcgtcactagatgagctcaggaagccagc
tcttagtagctctgaagcagatgaagaattctcctctgaggaaacagact
gggaggaagaagcagcccattaccagccagctaattggtcaagaaaaaag
ccaaaagcggctggcgaaagccagcgtactgttcaacctccgggcagtcg
gtttcaaggtccgccctatgcggagcccccgccctgcgtagtgcgtcagc
aatgcgcagagagacaatgcgcagagaggcaatgcgcagagaggcagtgc
gcagagaggcagtgcgcagaaaggcagtgcgcagagaggcagtgcgcaga
gaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaatac
aacaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgct
ccggtagaatacttacaaattaaagaacttgccgagtcggtccgtaaata
cggaaccaatgctaattttaccttggtgcagttagtcaggctcgccggca
tggcactaactcctgctgactggcaaacgattgtaaagccgctctcccta
gtatgggcaatatatggatgggaggagcgctttggcacgagctgcacaag
cgcagggccgacaacgcagctgctttgactccagagcagagagatggact
tttgacttgtttacgatcagagccttaattctgctggatcgaacaaacct
tatccaagttggggggagacttattgttggcccccacgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99242676_99243320
seq2: B6Ng01-291A19.b_460_1109

seq1  TGTTGGGGTCCTTCTAGCTTTTAGAGTCTCTGTCGAGAAGTCAAAGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGTCCTTCTAGCTTTTAGAGTCTCTGTCGAGAAGTCAAAGGTAA  50

seq1  TTCTGATAAGCCTCCCTGTTACTTGGCCTTTTTCACTTGAAATTTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATAAGCCTCCCTGTTACTTGGCCTTTTTCACTTGAAATTTTTAAT  100

seq1  ATTCTGTCTTCGTTTTGTAGATTTTGTATTTTAATTGGTATGTGGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTTCGTTTTGTAGATTTTGTATTTTAATTGGTATGTGGTGGAG  150

seq1  AATTTTCTTTTCTTTTCCATCTAGTTGGTATTCTGTAAGCACCTTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTTTCTTTTCCATCTAGTTGGTATTCTGTAAGCACCTTTTATG  200

seq1  TGTGTAAACATCTCTTCTTTTAGGTTATAGAATTTTCTTCTATGATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAACATCTCTTCTTTTAGGTTATAGAATTTTCTTCTATGATTTTA  250

seq1  ATGGAAATAATTTGTGGTCTTTGGAGCTGGGATTCTTCACTTTCTTCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATAATTTGTGGTCTTTGGAGCTGGGATTCTTCACTTTCTTCTAT  300

seq1  TCTCATTATTCTTACATTAGGTCATTTCATAGTATCTTAGACTTCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTATTCTTACATTAGGTCATTTCATAGTATCTTAGACTTCCTGGA  350

seq1  TGTTTTGTGTCAGAAATTTTAAAATATAACA-TTTAGTTTCATTGGTATA  399
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTTTTGTGTCAGAAATTTTAAAATATAACATTTTAGTTTCATTGGTATA  400

seq1  TCAATTTCTTTTACTGTATATTCTATGCCTGAGATTTTCTCTTCCATCTC  449
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTC-TTTACTGTATATTCTATGCCTGAGATTTTCTCTTCCATCTC  449

seq1  TTGTATCTGTTTGTGATACTTGTGTCTGTAGTCTACTCTACTATAGGTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTGTTTGTGATACTTGTGTCTGTAGTCTACTCTACTATAGGTTT  499

seq1  ACAGGTGAACCCAACCTGGATGTT-GCTAGTTCGGCAAG-CCTCTGGCAG  547
      |||||||||||||||||||||||| ||||| |||||||| ||||||||||
seq2  ACAGGTGAACCCAACCTGGATGTTGGCTAGATCGGCAAGTCCTCTGGCAG  549

seq1  GTTGCCT-GAATATTGGAACTCAAGGGGCAGTGCACAT-CTTATAGCAAG  595
      ||||||| |||||| ||||||| ||||||| ||||||| |||||||||| 
seq2  GTTGCCTGGAATATGGGAACTC-AGGGGCAATGCACATCCTTATAGCAAA  598

seq1  GT-GTGTATAGTCCAG-AGCACTGAAGCTAGGGGACCTGTAGAGGAGAGA  643
      || ||||||||| ||| |||||| | |||| |||||||||||||||||||
seq2  GTGGTGTATAGTTCAGAAGCACTTATGCTATGGGACCTGTAGAGGAGAGA  648

seq1  AA  645
      ||
seq2  AA  650


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