BAC Information

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BAC

Clone NameB6Ng01-292D08
Chromosome2 (Build37)
Map Location 155,709,335 - 155,849,447
singlet/doubletdoublet
Overlap gene2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4
Upstream geneEif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik
Downstream geneSpag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292D08.bB6Ng01-292D08.g
ACCGA088905GA088906
length1,023412
definitionB6Ng01-292D08.b B6Ng01-292D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,709,335 - 155,710,361)(155,849,030 - 155,849,447)
sequence
gaattctctggcatgagaaaaaccaccacaccgctgaactggctttataa
gttttctttttctatggcttttcttacagagctatacctggaacgccaaa
tgacacagaaagaattgcaaattaccacctttaaatctgtgcccaccccc
accccaaagctgagaagaaactctgcagccacatagttgggctgggcctg
cttctgtgtctactgaagcactgggaagacttgttcgttgggggagaccc
aggccagactctatgtgttccactgctgcaggctgtatgctaacagactg
aagcccctatacctgcaacacactcacaaattccaaattccaactgtcct
tcctatagaaaaggtatctgttataccatcaagctagaggggaggggttg
tgtcaaatacaatgaagatcaagaacagtaattaccactctaagtttcta
ttttgaaaacactatctctcacttaaagttttcaccacagctcaggcatt
tctcattatgaaggtaatgtaggagcttgtactaaggaaattactaatat
cttgctatttaaagtatggttgccaccttccacacccctattaacacagg
cataacctggaaacttgttagaaaactagacactctaaactggatgtgat
gtggatgtctgtaactccacaacttgggatgtggaaacaaaaggcccaga
aatccaagggcatccttggctatacagtgagttcaaggtcagtctgggtt
ataagagatcctgtgaaagaacaaggcaatggagaggaaaggctcccgac
tgaggatatggctcagttggtgtgtagcacgctgggttcattcccagcac
aacagaaagcaaggtgggatggtgcacacccacaacctctgcgtttggga
ggtggaggtaagaggatccaaagtttaaggccatcctgagttacatagtg
agttcaagccagccagaaacactctgaaaagagagatagagggaaagaga
gacagagaggatgaaggagggat
acacttcacgtggctgaacagggcttgatcaaaggtgatggctggctctt
ccacagtcttcagtcagtagttacagcagcacccctgccaccccaacccc
atcccccactttttgtacatgataggcttgctctcccaggccacggggtt
ttgggttttgctgttgctttttagtttagttttgttttgtttttctggag
ggcagctgttgaggaggtctctatggagccctggctgtcctggaacttac
tttgtagactaagttgtccttaaactcacagagatcctcctgcctctgct
gggattaaaggtgtgaatcatcatgccccgcacaggccacaggcttcatc
tagtacagtgccagtctcagtggagagctactgaggagggcggggcaggg
gagggggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155709335_155710361
seq2: B6Ng01-292D08.b_46_1068

seq1  GAATTCTCTGGCATGAGAAAAACCACCACACCGCTGAACTGGCTTTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCATGAGAAAAACCACCACACCGCTGAACTGGCTTTATAA  50

seq1  GTTTTCTTTTTCTATGGCTTTTCTTACAGAGCTATACCTGGAACGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTTTCTATGGCTTTTCTTACAGAGCTATACCTGGAACGCCAAA  100

seq1  TGACACAGAAAGAATTGCAAATTACCACCTTTAAATCTGTGCCCACCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGAAAGAATTGCAAATTACCACCTTTAAATCTGTGCCCACCCCC  150

seq1  ACCCCAAAGCTGAGAAGAAACTCTGCAGCCACATAGTTGGGCTGGGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAAGCTGAGAAGAAACTCTGCAGCCACATAGTTGGGCTGGGCCTG  200

seq1  CTTCTGTGTCTACTGAAGCACTGGGAAGACTTGTTCGTTGGGGGAGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGTCTACTGAAGCACTGGGAAGACTTGTTCGTTGGGGGAGACCC  250

seq1  AGGCCAGACTCTATGTGTTCCACTGCTGCAGGCTGTATGCTAACAGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGACTCTATGTGTTCCACTGCTGCAGGCTGTATGCTAACAGACTG  300

seq1  AAGCCCCTATACCTGCAACACACTCACAAATTCCAAATTCCAACTGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTATACCTGCAACACACTCACAAATTCCAAATTCCAACTGTCCT  350

seq1  TCCTATAGAAAAGGTATCTGTTATACCATCAAGCTAGAGGGGAGGGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAGAAAAGGTATCTGTTATACCATCAAGCTAGAGGGGAGGGGTTG  400

seq1  TGTCAAATACAATGAAGATCAAGAACAGTAATTACCACTCTAAGTTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATACAATGAAGATCAAGAACAGTAATTACCACTCTAAGTTTCTA  450

seq1  TTTTGAAAACACTATCTCTCACTTAAAGTTTTCACCACAGCTCAGGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAACACTATCTCTCACTTAAAGTTTTCACCACAGCTCAGGCATT  500

seq1  TCTCATTATGAAGGTAATGTAGGAGCTTGTACTAAGGAAATTACTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTATGAAGGTAATGTAGGAGCTTGTACTAAGGAAATTACTAATAT  550

seq1  CTTGCTATTTAAAGTATGGTTGCCACCTTCCACACCCCTATTAACACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTATTTAAAGTATGGTTGCCACCTTCCACACCCCTATTAACACAGG  600

seq1  CATAACCTGGAAACTTGTTAGAAAACTAGACACTCTAAACTGGATGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTGGAAACTTGTTAGAAAACTAGACACTCTAAACTGGATGTGAT  650

seq1  GTGGATGTCTGTAACTCCACAACTTGGGATGTGGAAACAAAAGGCCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGTCTGTAACTCCACAACTTGGGATGTGGAAACAAAAGGCCCAGA  700

seq1  AATCCAAGGGCATCCTTGGCTATACAGTGAGTTCAAGGTCAGTCTGGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGGGCATCCTTGGCTATACAGTGAGTTCAAGGTCAGTCTGGGTT  750

seq1  ATAAGAGATCCTGTGAAAGAACAAGGCAATGGAGAGGAAAGGCTCCCGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGATCCTGTGAAAGAACAAGGCAATGGAGAGGAAAGGCTCCCGAC  800

seq1  TGAGGATATGGCTCAGTTGGTGTGTAGCACGCTGGGTTCATTCCCAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATATGGCTCAGTTGGTGTGTAGCACGCTGGGTTCATTCCCAGCAC  850

seq1  AACAGAAAGCAAGGTGGGATGGTGCACACCCACAACCTCTGCGTTTGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGCAAGGTGGGATGGTGCACACCCACAACCTCTGCGTTTGGGA  900

seq1  GGTGGAGGTAAGAGGATCCAAAGTTTAAGGCCATCCTGAGTTACATAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGTAAGAGGATCCAAAGTTTAAGGCCATCCTGAGTTACATAGTG  950

seq1  AGTTCAAGGCCAGCCAGAAACACTCTGAAAAAGAGAGATAGAGGGAAAGA  1000
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTTCAA-GCCAGCCAGAAACACTCTG-AAAAGAGAGATAGAGGGAAAGA  998

seq1  GAGACAGAGAGGAAGGAAGGGAGGGAT  1027
      ||||||||||||| |  | ||||||||
seq2  GAGACAGAGAGGATG--AAGGAGGGAT  1023

seq1: chr2_155849030_155849447
seq2: B6Ng01-292D08.g_66_483 (reverse)

seq1  CCCCTCCCCCTCCCCTGCCCCGCCCTCCTCAGTAGCTCTCCACTGAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCTCCCCTGCCCCGCCCTCCTCAGTAGCTCTCCACTGAGACT  50

seq1  GGCACTGTACTAGATGAAGCCTGTGGCCTGTGCGGGGCATGATGATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTACTAGATGAAGCCTGTGGCCTGTGCGGGGCATGATGATTCAC  100

seq1  ACCTTTAATCCCAGCAGAGGCAGGAGGATCTCTGTGAGTTTAAGGACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAATCCCAGCAGAGGCAGGAGGATCTCTGTGAGTTTAAGGACAAC  150

seq1  TTAGTCTACAAAGTAAGTTCCAGGACAGCCAGGGCTCCATAGAGACCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTACAAAGTAAGTTCCAGGACAGCCAGGGCTCCATAGAGACCTCC  200

seq1  TCAACAGCTGCCCTCCAGAAAAACAAAACAAAACTAAACTAAAAAGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGCTGCCCTCCAGAAAAACAAAACAAAACTAAACTAAAAAGCAAC  250

seq1  AGCAAAACCCAAAACCCCGTGGCCTGGGAGAGCAAGCCTATCATGTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACCCAAAACCCCGTGGCCTGGGAGAGCAAGCCTATCATGTACAA  300

seq1  AAAGTGGGGGATGGGGTTGGGGTGGCAGGGGTGCTGCTGTAACTACTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGGGATGGGGTTGGGGTGGCAGGGGTGCTGCTGTAACTACTGAC  350

seq1  TGAAGACTGTGGAAGAGCCAGCCATCACCTTTGATCAAGCCCTGTTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTGTGGAAGAGCCAGCCATCACCTTTGATCAAGCCCTGTTCAGC  400

seq1  CACGTGAAGTGTGAATTC  418
      ||||||||||||||||||
seq2  CACGTGAAGTGTGAATTC  418