BAC Information

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BAC

Clone NameB6Ng01-292D21
Chromosome2 (Build37)
Map Location 61,631,957 - 61,633,147
singlet/doubletsinglet
Overlap genePsmd14
Upstream geneRbms1, ENSMUSG00000075325, Tank
Downstream geneTbr1, LOC100039274, Slc4a10, Dpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292D21.bB6Ng01-292D21.g
ACCGA088931GA088932
length1,1841,187
definitionB6Ng01-292D21.b B6Ng01-292D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttagtaaagataatgtaaattcaccagggaactagtgtccaat
ttatatgcaaaatgttgattgatgtttggccaaggtgttttaagagttca
ataaagcgatatttgtaaaaacataaatgctactggatgcctttaatccc
aagacgtggaaaggcagggctgggtgggtttctatgaatttaaagatagc
ccagtctacatagtgagttgtaggacagcaagaccctgtctcaaaaacat
acatacatacatacatacacacataatacatacatacgtacatacataca
ctgctatctagttgtgacagtagtcaaaagttttgttcttcttcatagtc
aagtctcttccttagaaagttttgcaaattgcttcatgtttgttcatttt
gctttccaaaatatactttgtaaaaaagtatttatttagactttctgctt
ctgtagcccatagtgttgtttttgttctattgctatgaaaaataaattta
aaaatcacaaaacaggtaaccacttagcagctacacagaggttgctcctg
gtgagaactgtgcctgctcttcaagcagcgctttgtcctttgtcacagta
ggatacatgctctactggggatgttggaaagcatgcacttaagtgggatc
ttagcaggttgtggaaagaacaagaatgtcaatgaggaacaaagagcagc
caaagggctattcagaggtaatatatagaataagacatcgtaaggggtgg
gagagaaaacaggcgctggagtaattaattgtacaggtgttcagaaaact
agagttgctctgtggatatctgaatgcttgtgacatggcaagggttcaga
ctatgttaaaagatagataatgatgacatttgagatattgttcatttgaa
atttgatcattggtagaaaaaaaaagagaatgatgttaaagtatttataa
aagtctcttatagagggtacatttgaggggattatgatcacataacagac
caaattccaagaatttcttagaactgtgcagaccgtgcatgatggatagc
catctgggggtcttgttgataaactgttagaaaacggttctagtgtgaat
aagcaaaaacatttcagtgccttttgttgctgagttaaccgaaggagcac
ggaatgctagcaattgaagccgaaatcaccagaa
gaattctacatcttgttccaaaggcaaacaggggaagactgacttcatca
gctaggaggaggctctcttccaaaatgggtggaccttgagcataggaaga
aatgtccaaaacccacccacacagtaacacacttcctccaacaaggtcac
acctcctaacagtgccactccatatagaccaagcatattcagaccaccac
acccttgcctcaaaaataaaaacaacaaaaaatagtcaagaaaacaaatt
aaccaacgtaaaaacaacaacatgctatatgtctaaacacacttctctgt
agaagaaataaaaatttctaagaaatatttcaaaaatgtcttcatcatct
ttagcaattagtaaaatgaacatttaaacaactttgaaatttcatcttac
ccaagtcaaaatggctatgatcaacaaacaacttacaacacatgttggca
agtatgtgaggaaaaggaaactcattcactgctgctgggagtgcaaacta
atgcagctactctagaagtcagtatagagaatcttcaaaaagctaacagc
agatctatcccatgacccagacataccactcttcagcatatggccagagg
actcagcatcctgctcagcaatgtttttacaatagtaaggaaatagaaat
aatctagcaatccttcaacagataaatggataatcaaagtgcatttatat
atacaatggactactattcaactgatagaaaaatgaaaccataaatttta
caaacatggtaattgaattaagtcagacagatactgttccatttatataa
aaatccatgtaaagaaaaagagaaaaaaaagaaagaaaaagagaaaatca
atagtttccagagtatgtgggcaaagtgaaatatggagtcacagattaat
gagtaaagaattttggagggaggaggtaatatcattgctatgggaatgaa
agaatagagatgatttcataatgttaatatgtaaatatcactgactgaat
gctttgaattttatattatttaagcccagcacttgagacacagagacttg
aatttttaatattattttacatttgatcaaaaatatatgccatataaagt
aaatagcatgttcttcttataacaacaggtatactgaactcttaatggtc
aggttagaaattttccggaataaaacaataggggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61631957_61633147
seq2: B6Ng01-292D21.b_47_1230

seq1  GAATTCCTTAGTAAAGATAATGTAAATTCACCAGGGAACTAGTGTCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGTAAAGATAATGTAAATTCACCAGGGAACTAGTGTCCAAT  50

seq1  TTATATGCAAAATGTTGATTGATGTTTGGCCAAGGTGTTTTAAGAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCAAAATGTTGATTGATGTTTGGCCAAGGTGTTTTAAGAGTTCA  100

seq1  ATAAAGCGATATTTGTAAAAACATAAATGCTACTGGATGCCTTTAATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCGATATTTGTAAAAACATAAATGCTACTGGATGCCTTTAATCCC  150

seq1  AAGACGTGGAAAGGCAGGGCTGGGTGGGTTTCTATGAATTTAAAGATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTGGAAAGGCAGGGCTGGGTGGGTTTCTATGAATTTAAAGATAGC  200

seq1  CCAGTCTACATAGTGAGTTGTAGGACAGCAAGACCCTGTCTCAAAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTACATAGTGAGTTGTAGGACAGCAAGACCCTGTCTCAAAAACAT  250

seq1  ACATACATACATACATACACACATAATACATACATACGTACATACATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATACATACACACATAATACATACATACGTACATACATACA  300

seq1  CTGCTATCTAGTTGTGACAGTAGTCAAAAGTTTTGTTCTTCTTCATAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATCTAGTTGTGACAGTAGTCAAAAGTTTTGTTCTTCTTCATAGTC  350

seq1  AAGTCTCTTCCTTAGAAAGTTTTGCAAATTGCTTCATGTTTGTTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTTCCTTAGAAAGTTTTGCAAATTGCTTCATGTTTGTTCATTTT  400

seq1  GCTTTCCAAAATATACTTTGTAAAAAAGTATTTATTTAGACTTTCTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCAAAATATACTTTGTAAAAAAGTATTTATTTAGACTTTCTGCTT  450

seq1  CTGTAGCCCATAGTGTTGTTTTTGTTCTATTGCTATGAAAAATAAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCCCATAGTGTTGTTTTTGTTCTATTGCTATGAAAAATAAATTTA  500

seq1  AAAATCACAAAACAGGTAACCACTTAGCAGCTACACAGAGGTTGCTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACAAAACAGGTAACCACTTAGCAGCTACACAGAGGTTGCTCCTG  550

seq1  GTGAGAACTGTGCCTGCTCTTCAAGCAGCGCTTTGTCCTTTGTCACAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACTGTGCCTGCTCTTCAAGCAGCGCTTTGTCCTTTGTCACAGTA  600

seq1  GGATACATGCTCTACTGGGGATGTTGGAAAGCATGCACTTAAGTGGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATGCTCTACTGGGGATGTTGGAAAGCATGCACTTAAGTGGGATC  650

seq1  TTAGCAGGTTGTGGAAAGAACAAGAATGTCAATGAGGAACAAAGAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGTTGTGGAAAGAACAAGAATGTCAATGAGGAACAAAGAGCAGC  700

seq1  CAAAGGGCTATTCAGAGGTAATATATAGAATAAGACATCGTAAGGGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCTATTCAGAGGTAATATATAGAATAAGACATCGTAAGGGGTGG  750

seq1  GAGAGAAAACAGGCGCTGGAGTAATTAATTGTACAGGTGTTCAGAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAACAGGCGCTGGAGTAATTAATTGTACAGGTGTTCAGAAAACT  800

seq1  AGAGTTGCTCTGTGGATATCTGAATGCTTGTGACATGGCAAGGGTTCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGCTCTGTGGATATCTGAATGCTTGTGACATGGCAAGGGTTCAGA  850

seq1  CTATGTTAAAAGATAGATAATGATGACATTTGAGATATTGTTCATTTGAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTATGTTAAAAGATAGATAATGATGACATTTGAGATATTGTTCATTTG-A  899

seq1  AATTTGATCATTGGTAGAAAAAAAAAGAGAATGATGTTAAAGTATTTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATCATTGGTAGAAAAAAAAAGAGAATGATGTTAAAGTATTTATA  949

seq1  AAAGTCTCTTTATAGAGGGTACATTTGAGGGGATTATGATCACATAACAG  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTC-TTATAGAGGGTACATTTGAGGGGATTATGATCACATAACAG  998

seq1  ACCAAATTCCAAGAATTTCTTAGAACTGTGCAGACCGTGCATGATGGGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCAAATTCCAAGAATTTCTTAGAACTGTGCAGACCGTGCATGAT-GGAT  1047

seq1  AGCCATCTGGGGGTCTTTGTTGATAAACTGTTAG-AAACGTTTCTAGTGT  1099
      ||||||||||||||| |||||||||||||||||| ||||| |||||||||
seq2  AGCCATCTGGGGGTC-TTGTTGATAAACTGTTAGAAAACGGTTCTAGTGT  1096

seq1  GAATAGCCACAAACATTTTCAGTGCTTTTTTGTTGGTTGAGTAAACCG-A  1148
      |||||  || ||||| |||||||||  ||||||| | ||||| ||||| |
seq2  GAATAAGCAAAAACA-TTTCAGTGC-CTTTTGTT-GCTGAGTTAACCGAA  1143

seq1  GGAGCACGG-ATGCAAAAGCAAATTTTGAAGCC-AAATCA-CAGAA  1191
      ||||||||| ||||   |||||   |||||||| |||||| |||||
seq2  GGAGCACGGAATGC--TAGCAA---TTGAAGCCGAAATCACCAGAA  1184