BAC Information

Click to search

BAC

Clone NameB6Ng01-292E12
Chromosome2 (Build37)
Map Location 88,470,611 - 88,471,766
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1
Downstream geneOlfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292E12.bB6Ng01-292E12.g
ACCGA088961GA088962
length1,165124
definitionB6Ng01-292E12.b B6Ng01-292E12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctatgccccattttttatagggctatttggttt
tctggagtctaaccctcttgagttctttgtattttttgatattagccttc
ttttggatttaagattggtaaagatcttttcctaatcttttggttgcctt
tttgtcttattgacagtgtcctttgccttacagaagcttttcaattttat
gagttcctatttgttaattcttgatcttacagctgaagccactggaattc
tgttcgggaatttttttcctgtgcacatatcttcgaggcttttccccact
ttctcttctataagtttcagtgtctgtttttatgtggaggtccttgatcc
acttagacttgggctttgtaaagggagataagaatagatcaattcaaatt
cgtctacatggtaactgccagttgagacagcaccatttgttgaaaatgct
gtcttttttactggatggttttagctcctatgtcaaagatcaagtgacca
gcatttttatataatcaacaaccaaactaagaagcatttgtttgcattcc
ataagaagccttccttgtatctcttaggagttgatatagtacaaatgtaa
tctcaaattttatctacaaaatcaatttatttgacagttcttatatattt
cagacttaaatagcataaattcagcatgctagagtctatcatcttataag
atagtctgtgaaaacaatatacgaccagttagaatttattgtattaaatg
ttagactgtgagaaccattccacatgtttataaattatcagatttgtctt
ttcactaatagataataagttatgctataaacacacaatgtctaatcttt
ctagtctcttcttaatgagtgtttatgtagtactcaatttagggttatta
tatatttcaatacactttcttcatatatcattgatataaatgataatgta
ttcaatttaaaacattagataattcattgaagatcgcttggataactgaa
gaaagaggtatatacagatgtaaacaagttatcatgtctagaatttcagc
aattatacatgatatatcatgaataaaaaacattgctgatgaaggatgag
ctttacactgtcccttgaatgactgaatgacctttttatcaatccagtcc
aataggctctccctt
ttgaaaatacaaccctgtacagaattggtatgtcagggtggggagatatc
cagggtaggggtagacaccctctcagaggagaaggggaggagtgcatacg
gggagggactgtgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88470611_88471766
seq2: B6Ng01-292E12.b_47_1209

seq1  ATTCTTTGTTTAGCTCTATGCCCCATTTTTTATAGGGCTATTTGGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGTTTAGCTCTATGCCCCATTTTTTATAGGGCTATTTGGTTTTC  50

seq1  TGGAGTCTAACCCTCTTGAGTTCTTTGTATTTTTTGATATTAGCCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTAACCCTCTTGAGTTCTTTGTATTTTTTGATATTAGCCTTCTT  100

seq1  TTGGATTTAAGATTGGTAAAGATCTTTTCCTAATCTTTTGGTTGCCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTAAGATTGGTAAAGATCTTTTCCTAATCTTTTGGTTGCCTTTT  150

seq1  TGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTTCAATTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTTCAATTTTATGA  200

seq1  GTTCCTATTTGTTAATTCTTGATCTTACAGCTGAAGCCACTGGAATTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTATTTGTTAATTCTTGATCTTACAGCTGAAGCCACTGGAATTCTG  250

seq1  TTCGGGAATTTTTTTCCTGTGCACATATCTTCGAGGCTTTTCCCCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGAATTTTTTTCCTGTGCACATATCTTCGAGGCTTTTCCCCACTTT  300

seq1  CTCTTCTATAAGTTTCAGTGTCTGTTTTTATGTGGAGGTCCTTGATCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTATAAGTTTCAGTGTCTGTTTTTATGTGGAGGTCCTTGATCCAC  350

seq1  TTAGACTTGGGCTTTGTAAAGGGAGATAAGAATAGATCAATTCAAATTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTGGGCTTTGTAAAGGGAGATAAGAATAGATCAATTCAAATTCG  400

seq1  TCTACATGGTAACTGCCAGTTGAGACAGCACCATTTGTTGAAAATGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGGTAACTGCCAGTTGAGACAGCACCATTTGTTGAAAATGCTGT  450

seq1  CTTTTTTACTGGATGGTTTTAGCTCCTATGTCAAAGATCAAGTGACCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTACTGGATGGTTTTAGCTCCTATGTCAAAGATCAAGTGACCAGC  500

seq1  ATTTTTATATAATCAACAACCAAACTAAGAAGCATTTGTTTGCATTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATATAATCAACAACCAAACTAAGAAGCATTTGTTTGCATTCCAT  550

seq1  AAGAAGCCTTCCTTGTATCTCTTAGGAGTTGATATAGTACAAATGTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCTTCCTTGTATCTCTTAGGAGTTGATATAGTACAAATGTAATC  600

seq1  TCAAATTTTATCTACAAAATCAATTTATTTGACAGTTCTTATATATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTATCTACAAAATCAATTTATTTGACAGTTCTTATATATTTCA  650

seq1  GACTTAAATAGCATAAATTCAGCATGCTAGAGTCTATCATCTTATAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAATAGCATAAATTCAGCATGCTAGAGTCTATCATCTTATAAGAT  700

seq1  AGTCTGTGAAAACAATATACGACCAGTTAGAATTTATTGTATTAAATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGAAAACAATATACGACCAGTTAGAATTTATTGTATTAAATGTT  750

seq1  AGACTGTGAGAACCATTCCACATGTTTATAAATTATCAGATTTGTCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGAGAACCATTCCACATGTTTATAAATTATCAGATTTGTCTTTT  800

seq1  CACTAATAGATAATAAGTTATGCTATAAACACACAATGTCTAATCTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAGATAATAAGTTATGCTATAAACACACAATGTCTAATCTTTCT  850

seq1  AGTCTCTTCTTAATGAGTGTTTATGTAGTACTCAATTTAGGGTTATTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTCTTAATGAGTGTTTATGTAGTACTCAATTTAGGGTTATTATA  900

seq1  TATTTCAATACACTTTCTTCATATATCATTGATATAAATGATAATGTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATACACTTTCTTCATATATCATTGATATAAATGATAATGTATT  950

seq1  CAATTTAAAACATTAGATAATTCATTGAAGATCGCTTGGATAACTGAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAACATTAGATAATTCATTGAAGATCGCTTGGATAACTGAAGA  1000

seq1  AAGAGGTATATACAGATGTAAACAAGTTATCATGTCTAGAATTTCAGCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTATATACAGATGTAAACAAGTTATCATGTCTAGAATTTCAGCAA  1050

seq1  TTATACATGATATATCAATGAAT-AAAAACATTGCTGATGAAAGATGAGC  1099
      |||||||||||||||| |||||| |||||||||||||||||| |||||||
seq2  TTATACATGATATATC-ATGAATAAAAAACATTGCTGATGAAGGATGAGC  1099

seq1  TTTACACTGTCCCCTG-ATGACTG-ATGAC--TTTTATC-ATCCAGTCC-  1143
      ||||||||||||| || ||||||| |||||  ||||||| ||||||||| 
seq2  TTTACACTGTCCCTTGAATGACTGAATGACCTTTTTATCAATCCAGTCCA  1149

seq1  ATA-GCTCTCCCTT  1156
      ||| ||||||||||
seq2  ATAGGCTCTCCCTT  1163