BAC Information

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BAC

Clone NameB6Ng01-292O14
Chromosome2 (Build37)
Map Location 145,775,875 - 145,809,810
singlet/doubletdoublet
Overlap gene4930529M08Rik
Upstream geneSlc24a3, LOC627312, OTTMUSG00000015643, LOC433482, LOC100043810, Rin2, Nat5, Crnkl1, LOC100043563
Downstream geneInsm1, A230067G21Rik, LOC668918, Gm114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292O14.bB6Ng01-292O14.g
ACCGA089426GA089427
length720975
definitionB6Ng01-292O14.b B6Ng01-292O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,775,875 - 145,776,589)(145,808,836 - 145,809,810)
sequence
ggaattctttaaatttgttgtctagcaagtcctcattttaaattgctacc
ctctgaggccaacaggtagttcagtaatttaaagaaatggatgggggtgg
tcaggaaagagtcaagcctcgccaacttacatgttttcaaaattagattt
cctcagccctctctttagaaattcgtacggtcacaacaggctgcagtagc
atcctgaatgacagggtgggggaaggatgagagcatccttcgagtcatgg
tgatgcatctctgacagcctgtgcagacccccgggtagtgtgggtggggg
gctcagctttcaggtcactatgtaatgtcacaccagaccatccagatgcc
aggtcaaaggttaatgtcagcagaaatctggtatgccgctcagacatcgt
gcccttttattcccgaggccccccacccgactggcaggagaggagctctt
tggaatggaaggaaaagtagagggaaaagaaagtagcctgggagacacga
tggccttggctggcggggcgcaactgagcccatgtgattttccagacacc
ttgtttcctcatggggagggagtgtgactgctttgttactaacacggtct
caccctgtctttcctctccaggactgttgttcaaggcggtgccagaactg
tactttcatatttccttatagtgtccaacatatttgagcctaggtaaggt
cctcaacagtccagtgtccc
gaaagtccacgatgagggtgaaataacagatgattccaactgaaaaaccc
gggtggagccagtctggaagtcacgaacaaagaaatcggcctgggacgca
catggagaaacttctcagtgggaaaaggtaatgcccctcttccaggaaac
atggcggtgattcacttagtgttaactttaaaagagaagaacctgcaact
ttctttcctccctcctcccaaacccccatcaatttaaggttgttccttat
gtgatggaggagagctgggatcttgcaggtttggagccaaattatctggg
attattttaagtcatctcccccattccctactcccccctccaaaaaaaaa
aaatggcattcattgattcacagtccatctctgtgcttgactgaacatcc
ttgtgactctccagtaaaactcattttagaatgtccaatcagatctctta
gcttcgcctaatcctaaggccaagatgttctctaagagcatctgggaagc
aaggcagtgacctccgtgcttcactgagccctccccacctgatgcttcca
ccatgtctgaatatgctttgatttataactttcttttgatctgttcctat
aaaactgttgataaaactgttaccacatcagatggaactatttggggtaa
tctgagtctgtgtccttgggccatgggacactcacatttggctccagaat
caactatattttactgctttgctgggatagctgtgcttgtgcaccgacag
ggcatgtctatgtaagagaagctgggtgtttccccataactattacaaaa
ggtgctttttgtagaactagttttgtgttctccttgctttcctcttgact
gccaaatattttatgtgggtttaaatcagcactcaatacagaggatggag
tctctttccttgtagagctacatacaagcatacatacatacatacataca
tatatgtatatacgtatatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_145775875_145776589
seq2: B6Ng01-292O14.b_49_767

seq1  GAATTCTTTAAATTTGTTGTCTAGCAAGTCCTCATTTTAAATTGCTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAATTTGTTGTCTAGCAAGTCCTCATTTTAAATTGCTACCC  50

seq1  TCTGAGGCCAACAGGTAGTTCAGTAATTTAAAGAAATGGATGGGGGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCCAACAGGTAGTTCAGTAATTTAAAGAAATGGATGGGGGTGGT  100

seq1  CAGGAAAGAGTCAAGCCTCGCCAACTTACATGTTTTCAAAATTAGATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGAGTCAAGCCTCGCCAACTTACATGTTTTCAAAATTAGATTTC  150

seq1  CTCAGCCCTCTCTTTAGAAATTCGTACGGTCACAACAGGCTGCAGTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCTCTCTTTAGAAATTCGTACGGTCACAACAGGCTGCAGTAGCA  200

seq1  TCCTGAATGACAGGGTGGGGGAAGGATGAGAGCATCCTTCGAGTCATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATGACAGGGTGGGGGAAGGATGAGAGCATCCTTCGAGTCATGGT  250

seq1  GATGCATCTCTGACAGCCTGTGCAGACCCCCGGGTAGTGTGGGTGGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATCTCTGACAGCCTGTGCAGACCCCCGGGTAGTGTGGGTGGGGGG  300

seq1  CTCAGCTTTCAGGTCACTATGTAATGTCACACCAGACCATCCAGATGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTTTCAGGTCACTATGTAATGTCACACCAGACCATCCAGATGCCA  350

seq1  GGTCAAAGGTTAATGTCAGCAGAAATCTGGTATGCCGCTCAGACATCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGGTTAATGTCAGCAGAAATCTGGTATGCCGCTCAGACATCGTG  400

seq1  CCCTTTTATTCCCGAGGCCCCCCACCCGACTGGCAGGAGAGGAGCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATTCCCGAGGCCCCCCACCCGACTGGCAGGAGAGGAGCTCTTT  450

seq1  GGAATGGAAGGAAAAGTAGAGGGAAAAGAAAGTAGCCTGGGAGACACGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGAAGGAAAAGTAGAGGGAAAAGAAAGTAGCCTGGGAGACACGAT  500

seq1  GGCCTTGGCTGGCGGGGCGCAACTGAGCCCATGTGATTTTCCAGACACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGCTGGCGGGGCGCAACTGAGCCCATGTGATTTTCCAGACACCT  550

seq1  TGTTTCCTCATGGGGAGGGAGTGTGACTGCTTTGTTACTAACACGGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCATGGGGAGGGAGTGTGACTGCTTTGTTACTAACACGGTCTC  600

seq1  ACCCTGTCTTTCCTCTCCAGGACTG-TGTTCAAGGCGGTGCCAGAACTGT  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCCTGTCTTTCCTCTCCAGGACTGTTGTTCAAGGCGGTGCCAGAACTGT  650

seq1  AC-TTCATA-TTCCTTATAGTG-CCAACATATTTGAGCCTAGGTAAGGTC  696
      || |||||| |||||||||||| |||||||||||||||||||||||||||
seq2  ACTTTCATATTTCCTTATAGTGTCCAACATATTTGAGCCTAGGTAAGGTC  700

seq1  CTCAACAGTCCAGTGTCCC  715
      |||||||||||||||||||
seq2  CTCAACAGTCCAGTGTCCC  719

seq1: chr2_145808836_145809810
seq2: B6Ng01-292O14.g_76_1050 (reverse)

seq1  ACACACATATACGTATATACATATATGTATGTATGTATGTATGTATGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATACGTATATACATATATGTATGTATGTATGTATGTATGCTT  50

seq1  GTATGTAGCTCTACAAGGAAAGAGACTCCATCCTCTGTATTGAGTGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAGCTCTACAAGGAAAGAGACTCCATCCTCTGTATTGAGTGCTGA  100

seq1  TTTAAACCCACATAAAATATTTGGCAGTCAAGAGGAAAGCAAGGAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACCCACATAAAATATTTGGCAGTCAAGAGGAAAGCAAGGAGAACA  150

seq1  CAAAACTAGTTCTACAAAAAGCACCTTTTGTAATAGTTATGGGGAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAGTTCTACAAAAAGCACCTTTTGTAATAGTTATGGGGAAACAC  200

seq1  CCAGCTTCTCTTACATAGACATGCCCTGTCGGTGCACAAGCACAGCTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCTCTTACATAGACATGCCCTGTCGGTGCACAAGCACAGCTATC  250

seq1  CCAGCAAAGCAGTAAAATATAGTTGATTCTGGAGCCAAATGTGAGTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAAGCAGTAAAATATAGTTGATTCTGGAGCCAAATGTGAGTGTCC  300

seq1  CATGGCCCAAGGACACAGACTCAGATTACCCCAAATAGTTCCATCTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCCAAGGACACAGACTCAGATTACCCCAAATAGTTCCATCTGATG  350

seq1  TGGTAACAGTTTTATCAACAGTTTTATAGGAACAGATCAAAAGAAAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACAGTTTTATCAACAGTTTTATAGGAACAGATCAAAAGAAAGTTA  400

seq1  TAAATCAAAGCATATTCAGACATGGTGGAAGCATCAGGTGGGGAGGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAAAGCATATTCAGACATGGTGGAAGCATCAGGTGGGGAGGGCTC  450

seq1  AGTGAAGCACGGAGGTCACTGCCTTGCTTCCCAGATGCTCTTAGAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGCACGGAGGTCACTGCCTTGCTTCCCAGATGCTCTTAGAGAACA  500

seq1  TCTTGGCCTTAGGATTAGGCGAAGCTAAGAGATCTGATTGGACATTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCCTTAGGATTAGGCGAAGCTAAGAGATCTGATTGGACATTCTAA  550

seq1  AATGAGTTTTACTGGAGAGTCACAAGGATGTTCAGTCAAGCACAGAGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTTTACTGGAGAGTCACAAGGATGTTCAGTCAAGCACAGAGATG  600

seq1  GACTGTGAATCAATGAATGCCATTTTTTTTTTTTGGAGGGGGGAGTAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGAATCAATGAATGCCATTTTTTTTTTTTGGAGGGGGGAGTAGGG  650

seq1  AATGGGGGAGATGACTTAAAATAATCCCAGATAATTTGGCTCCAAACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGAGATGACTTAAAATAATCCCAGATAATTTGGCTCCAAACCTG  700

seq1  CAAGATCCCAGCTCTCCTCCATCACATAAGGAACAACCTTAAATTGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCCCAGCTCTCCTCCATCACATAAGGAACAACCTTAAATTGATGG  750

seq1  GGGTTTGGGAGGAGGGAGGAAAGAAAGTTGCAGGTTCTTCTCTTTTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGGAGGAGGGAGGAAAGAAAGTTGCAGGTTCTTCTCTTTTAAAG  800

seq1  TTAACACTAAGTGAATCACCGCCATGTTTCCTGGAAGAGGGGCATTACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTAAGTGAATCACCGCCATGTTTCCTGGAAGAGGGGCATTACCT  850

seq1  TTTCCCACTGAGAAGTTTCTCCATGTGCGTCCCAGGCCGATTTCTTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCACTGAGAAGTTTCTCCATGTGCGTCCCAGGCCGATTTCTTTGTT  900

seq1  CGTGACTTCCAGACTGGCTCCACCCGGGTTTTTCAGTTGGAATCATCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACTTCCAGACTGGCTCCACCCGGGTTTTTCAGTTGGAATCATCTGT  950

seq1  TATTTCACCCTCATCGTGGACTTTC  975
      |||||||||||||||||||||||||
seq2  TATTTCACCCTCATCGTGGACTTTC  975