BAC Information

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BAC

Clone NameB6Ng01-292P06
Chromosome2 (Build37)
Map Location 130,253,489 - 130,359,841
singlet/doubletdoublet
Overlap geneVps16, Ptpra
Upstream geneF830045P16Rik, Sirpa, Pdyn, Ppia-ps2_1620.1, Stk35, Tgm3, AU015228, LOC100043438, Tgm6, Snrpb, Tmc2, Nol5a, Idh3b, Ebf4, LOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik
Downstream geneMrps26, Oxt, Avp, 1700012O15Rik, Ubox5, Fastkd5, Prosapip1, 2600009E05Rik, Itpa, Slc4a11, 4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292P06.bB6Ng01-292P06.g
ACCGA089457GA089458
length745568
definitionB6Ng01-292P06.b B6Ng01-292P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,359,097 - 130,359,841)(130,253,489 - 130,254,062)
sequence
gaattcacattcctgcaggtagacacactttgaaagacttgctatgctct
caggcacctaacggtggtgaggagctggctcctatcagtctagaccagag
tctcatgtcaatgtgtcaactgtctgtgcttcaagtcctgtgatccttag
caggggaggtagtctttgtgctgcccagaatgtagacgcctgcagctgcc
tgcaccactccagggtacctgggactgctttccttccctcaggccttggt
tcacaggggaggcactgaccagacttacttggtagcaagcagtctttctt
gtcttggtctcccttatttttactactgagggtaaggcctgcttttgttt
gtagcatttgaaatgctcacaaaagggtttacagaaatatgcatctatgg
gctggagagatggcttagtggttaagagcactgactgctcttccaaaggt
cctgagttcaaatcccagcaaccacatggtggctcacagccatccataac
cagatctgatgccctcttctcgagtgtctgaagacagctacagtgtactt
acatataatgaataaataaatctaaaaaaagaaatatgcatctatattca
gatttctgtattggaaactatagtgaataatgaaaaagtaaacaaaaata
taattttaaattagctacttggtcttgcaaactgtatatgccccagtaca
ggggaacgccagggccaagaagtgggagtgggtgggtaggggagg
tgaacttaggctgtgaggaagcaagttatcaaggatggtttggtttctta
gcttaaaatcatgaaaagggaaaagtgaacttggcacagaagaggatgga
cttatttggggggacgtgttggggcggtattcatttgtgctttgtggtgt
gtgtatgtgtgcatggctcttgcagaagggggagggttggtgttgctcct
caggagccattcactctgtttaagacaaggtctctcactgacccagggca
actgatgaggctgggcatttcccagggatccacctgtctccgccttccca
gccctggactcacaagcatgggccaccatgctgggcgttttatgtagtgc
tgggatcaactcaaggcttcacacttttgccgctgtagcgagttagtgaa
tgagttagcagtctcccagtcctgtgagcatgcacagtcacaagagtgac
atttgttaaggaggaagagtgatgatgccggcattatagttttgaataca
tatgaatatttagtaaaaaaatcattaagcgtacattaaaaaatgtatct
tagccgggtgtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_130359097_130359841
seq2: B6Ng01-292P06.b_46_790 (reverse)

seq1  CCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCCTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCCTGTAC  50

seq1  TGGGGCATATACAGTTTGCAAGACCAAGTAGCTAATTTAAAATTATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATACAGTTTGCAAGACCAAGTAGCTAATTTAAAATTATATTT  100

seq1  TTGTTTACTTTTTCATTATTCACTATAGTTTCCAATACAGAAATCTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTACTTTTTCATTATTCACTATAGTTTCCAATACAGAAATCTGAAT  150

seq1  ATAGATGCATATTTCTTTTTTTAGATTTATTTATTCATTATATGTAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGCATATTTCTTTTTTTAGATTTATTTATTCATTATATGTAAGTA  200

seq1  CACTGTAGCTGTCTTCAGACACTCGAGAAGAGGGCATCAGATCTGGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGCTGTCTTCAGACACTCGAGAAGAGGGCATCAGATCTGGTTAT  250

seq1  GGATGGCTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTT  300

seq1  TGGAAGAGCAGTCAGTGCTCTTAACCACTAAGCCATCTCTCCAGCCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGCAGTCAGTGCTCTTAACCACTAAGCCATCTCTCCAGCCCATA  350

seq1  GATGCATATTTCTGTAAACCCTTTTGTGAGCATTTCAAATGCTACAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATATTTCTGTAAACCCTTTTGTGAGCATTTCAAATGCTACAAACA  400

seq1  AAAGCAGGCCTTACCCTCAGTAGTAAAAATAAGGGAGACCAAGACAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCCTTACCCTCAGTAGTAAAAATAAGGGAGACCAAGACAAGAA  450

seq1  AGACTGCTTGCTACCAAGTAAGTCTGGTCAGTGCCTCCCCTGTGAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCTTGCTACCAAGTAAGTCTGGTCAGTGCCTCCCCTGTGAACCAA  500

seq1  GGCCTGAGGGAAGGAAAGCAGTCCCAGGTACCCTGGAGTGGTGCAGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAGGGAAGGAAAGCAGTCCCAGGTACCCTGGAGTGGTGCAGGCAG  550

seq1  CTGCAGGCGTCTACATTCTGGGCAGCACAAAGACTACCTCCCCTGCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGCGTCTACATTCTGGGCAGCACAAAGACTACCTCCCCTGCTAAG  600

seq1  GATCACAGGACTTGAAGCACAGACAGTTGACACATTGACATGAGACTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACAGGACTTGAAGCACAGACAGTTGACACATTGACATGAGACTCTG  650

seq1  GTCTAGACTGATAGGAGCCAGCTCCTCACCACCGTTAGGTGCCTGAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGACTGATAGGAGCCAGCTCCTCACCACCGTTAGGTGCCTGAGAGC  700

seq1  ATAGCAAGTCTTTCAAAGTGTGTCTACCTGCAGGAATGTGAATTC  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGTCTTTCAAAGTGTGTCTACCTGCAGGAATGTGAATTC  745

seq1: chr2_130253489_130254062
seq2: B6Ng01-292P06.g_65_638

seq1  GAATTCTGAACTTAGGCTGTGAGGAAGCAAGTTATCAAGGATGGTTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACTTAGGCTGTGAGGAAGCAAGTTATCAAGGATGGTTTGGT  50

seq1  TTCTTAGCTTAAAATCATGAAAAGGGAAAAGTGAACTTGGCACAGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGCTTAAAATCATGAAAAGGGAAAAGTGAACTTGGCACAGAAGAG  100

seq1  GATGGACTTATTTGGGGGGACGTGTTGGGGCGGTATTCATTTGTGCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACTTATTTGGGGGGACGTGTTGGGGCGGTATTCATTTGTGCTTTG  150

seq1  TGGTGTGTGTATGTGTGCATGGCTCTTGCAGAAGGGGGAGGGTTGGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTGTATGTGTGCATGGCTCTTGCAGAAGGGGGAGGGTTGGTGTT  200

seq1  GCTCCTCAGGAGCCATTCACTCTGTTTAAGACAAGGTCTCTCACTGACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCAGGAGCCATTCACTCTGTTTAAGACAAGGTCTCTCACTGACCC  250

seq1  AGGGCAACTGATGAGGCTGGGCATTTCCCAGGGATCCACCTGTCTCCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAACTGATGAGGCTGGGCATTTCCCAGGGATCCACCTGTCTCCGCC  300

seq1  TTCCCAGCCCTGGACTCACAAGCATGGGCCACCATGCTGGGCGTTTTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCCCTGGACTCACAAGCATGGGCCACCATGCTGGGCGTTTTATG  350

seq1  TAGTGCTGGGATCAACTCAAGGCTTCACACTTTTGCCGCTGTAGCGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTGGGATCAACTCAAGGCTTCACACTTTTGCCGCTGTAGCGAGTT  400

seq1  AGTGAATGAGTTAGCAGTCTCCCAGTCCTGTGAGCATGCACAGTCACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGAGTTAGCAGTCTCCCAGTCCTGTGAGCATGCACAGTCACAAG  450

seq1  AGTGACATTTGTTAAGGAGGAAGAGTGATGATGCCGGCATTATAGTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATTTGTTAAGGAGGAAGAGTGATGATGCCGGCATTATAGTTTTG  500

seq1  AATACATATGAATATTTAGTAAAAAAATCATTAAGCGTACATTAAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATATGAATATTTAGTAAAAAAATCATTAAGCGTACATTAAAAAAT  550

seq1  GTATCTTAGCCGGGTGTGGTGGTG  574
      ||||||||||||||||||||||||
seq2  GTATCTTAGCCGGGTGTGGTGGTG  574