BAC Information

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BAC

Clone NameB6Ng01-293A14
Chromosome2 (Build37)
Map Location 36,132,468 - 36,133,237
singlet/doubletsinglet
Overlap genenone
Upstream geneGsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1
Downstream geneOlfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293A14.bB6Ng01-293A14.g
ACCGA089517GA089518
length1,241776
definitionB6Ng01-293A14.b B6Ng01-293A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaggaattcagtaagaaggttacctattcagtaacattcaaa
tttacttctagtagagacagtgaaactaattaggcattacaaagaacaga
gccagaatagctcagggctggtctgcagtgtttacttgagacaatagcca
gtcttacccagagaagggaattcacaatggcctagtgaataggtgggttt
accatgaaagagttagggaattcccctgagacaggtttcttcactaggcc
caaagaaatcaggcatttactaagaaaccctggtggtgggcttaacaata
gactaacattacacctggctctcttcttagtggcagcagcctggtcccac
cttcttttgatgtatacattccttaagttttgtgtcactgtaactcattg
gatgtatctcgcctggtttcttgttattgttctgtataaaaagttcgatg
ctcgacttgacaaattacattcagattctacacaacctcttgtgttgcgt
ctatttgtcatttgccaactccttgtccatctgcaaccagagacccatcc
tacccagacaagggaccaagagggtctgcggcaaggagtaaacagtaaaa
aataatcaaactctggactgaaatcaacaaagtagaaacaaagagaccaa
tacaaagaatcatggaaacaaagagttgggttttaaggtcccaggaatca
atgaagaaagacgcaagactcaaaagtatgcaaaagtaaagagcatttat
tctgcagaaacaaacaatatgcaagagtcagccatttattcaaaattgca
acctcaaaataagcttgcaggctgcattttagttcacctaggaaattttt
caggatggttagttcatttttgatatgattagataagtaacagcaattat
attagtgcatttgtaatttgtcattatatttgtttaatcatttttggtct
gtctttagaagaagtttcaggtactgtctcagttccttggactggttatc
actctcagctaaaacaggaccatttctgattaatggtctattttctctct
gggtgtgtgatgtgtgggggtgggtatttgtaggagccttacttgctctt
gagaaaagtgctaacatccactcgagttgtggactatgcatgacaaagac
cttgtgagcgtgtctgaatctcatggaagaatctccagaaacttaaccct
cctgggaactatggtacattccactacgcgatcgagagtgc
gaattcacattcaataatatacagagctagagttgcagatggatgaggct
tctaggtagcagagagtcagcaataaacatgagctctaaatagtatcatt
aaataagagtgatcttatactaaaccatttcttccaagctaggcattgtt
agaatgaaagggtctgttttgtactccatctgctttatagtcaattgctt
catggcttggttaggacattttgaaaataacaatcaacttagactacttt
ccctttgaaattcacataggaagttcaggcacagagagaatgctaacgaa
gacaatccacatttccaagctatactcatgcctagcattgttaggaaatc
tgagtaataaggaattcagaagtatgctttagtttatattttggaaggta
acctagcaaaagggtttaagagcacaaactctaggatccgagtttgaatc
ctagttccttattcaccatatggatcttaaacatattattttacttcttg
ttgattctgtcatttctcttgtacagtttagtggggtggtatggaaggta
aatgtactgatgaacataaattattcaatacagcatctggcatgttgaaa
atagtatgttttaccattgtcatttgaacagattctgcgtgtgattctct
atccctaagagatggaatgtgttgcataaagtggatatttaagaagattt
tcttggctcgggtgacagtattaattaatgcagtgaaagaagttgaggtt
tggattgagaaaagttaattagtact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36132468_36133237
seq2: B6Ng01-293A14.g_67_842

seq1  GAATTCACATTCAATAATATACAGAGCTAGAGTTGCAGATGGATGAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTCAATAATATACAGAGCTAGAGTTGCAGATGGATGAGGCT  50

seq1  TCTAGGTAGCAGAGAGTCAGCAATAAACATGAGCTCTAAATAGTATCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTAGCAGAGAGTCAGCAATAAACATGAGCTCTAAATAGTATCATT  100

seq1  AAATAAGAGTGATCTTATACTAAACCATTTCTTCCAAGCTAGGCATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAGTGATCTTATACTAAACCATTTCTTCCAAGCTAGGCATTGTT  150

seq1  AGAATGAAAGGGTCTGTTTTGTACTCCATCTGCTTTATAGTCAATTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAAGGGTCTGTTTTGTACTCCATCTGCTTTATAGTCAATTGCTT  200

seq1  CATGGCTTGGTTAGGACATTTTGAAAATAACAATCAACTTAGACTACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTGGTTAGGACATTTTGAAAATAACAATCAACTTAGACTACTTT  250

seq1  CCCTTTGAAATTCACATAGGAAGTTCAGGCACAGAGAGAATGCTAACGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAAATTCACATAGGAAGTTCAGGCACAGAGAGAATGCTAACGAA  300

seq1  GACAATCCACATTTCCAAGCTATACTCATGCCTAGCATTGTTAGGAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCCACATTTCCAAGCTATACTCATGCCTAGCATTGTTAGGAAATC  350

seq1  TGAGTAATAAGGAATTCAGAAGTATGCTTTAGTTTATATTTTGGAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATAAGGAATTCAGAAGTATGCTTTAGTTTATATTTTGGAAGGTA  400

seq1  ACCTAGCAAAAGGGTTTAAGAGCACAAACTCTAGGATCCGAGTTTGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCAAAAGGGTTTAAGAGCACAAACTCTAGGATCCGAGTTTGAATC  450

seq1  CTAGTTCCTTATTCACCATATGGATCTTAAACATATTATTTTACTTCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCCTTATTCACCATATGGATCTTAAACATATTATTTTACTTCTTG  500

seq1  TTGATTCTGTCATTTCTCTTGTACAGTTTAGTGGGGTGGTATGGAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTGTCATTTCTCTTGTACAGTTTAGTGGGGTGGTATGGAAGGTA  550

seq1  AATGTACTGATGAACATAAATTATTCAATACAGCATCTGGCATGTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTGATGAACATAAATTATTCAATACAGCATCTGGCATGTTGAAA  600

seq1  ATAGTATGTTTTACCATTGTCA-TTGAACAGATTCTGCGTGTGATTCTCT  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATAGTATGTTTTACCATTGTCATTTGAACAGATTCTGCGTGTGATTCTCT  650

seq1  ATCCCTAAGAGATGGAATGTGTTGCATAAAGTGGATATTTAAGAAGATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAAGAGATGGAATGTGTTGCATAAAGTGGATATTTAAGAAGATTT  700

seq1  TCTT-GCTC-GGTGACAGTATTAATTAATGCAGTGAAAGAAGTTGAGG-T  746
      |||| |||| |||||||||||||||||||||||||||||||||||||| |
seq2  TCTTGGCTCGGGTGACAGTATTAATTAATGCAGTGAAAGAAGTTGAGGTT  750

seq1  TGGA-TGAGAAAAG-TAATTAGTACT  770
      |||| ||||||||| |||||||||||
seq2  TGGATTGAGAAAAGTTAATTAGTACT  776