BAC Information

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BAC

Clone NameB6Ng01-293H04
Chromosome2 (Build37)
Map Location 139,270,830 - 139,271,994
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628103
Downstream geneC130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293H04.bB6Ng01-293H04.g
ACCGA089828GA089829
length1,1621,168
definitionB6Ng01-293H04.b B6Ng01-293H04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgaattacatataaacctgccagtaaagatacagatattttg
tgtgataatggcatttctattacaggggtaaccaactactgccttcttta
atttgaggcctgctctacaagagaagatttatgtatagtgccataaacat
agaaaaagcacatggctgaaaaggaagttcattccactcctttaaatgtt
tagagaacctttcggaagagaggattgaaattgaagagcagaaggataag
aagaagggcttcaaaactgccatgtttcaagcacagcacagcacagccat
agagatcatgaattcaagagtatgtgtgacaactggcattgattccatgc
aaatcaggtcttattaaaagtcatgtatgactaagaagaggcttggggcc
ttcaacttcctgctgatctatttgcagctaatatagataccacccagttt
tatacacaccagtgagcccacagatctctgacaattagttgcaaaaccca
ggattatacaggcagttcctagtaaaaccccactggatactagacagaac
aaaaaccaaatgaatgttgcagggatttatatggaaggagtcagactggc
aggccctgaaggaaaataaggggttgggagaaagtaaccagaatgtatga
aattgtcaaagaacagcatttattaatataaaaagaaagaaaccgaaaca
gaaatcaagactaaagctgtgaaaaacacagcttttcaaatcagaaagag
gaagtttcaagcaaaaaaatttttttctaataaaggaaataaagttgtct
agaagatgtaggaggactttgaaagcaaatataaaataagaatgttttct
ggttgatttgatattaggttatcttgacagacaaaataaaaagcccctaa
aggacttcaatgtagaaattcgtattttcttagtctgggctccaggctgg
tctaagaattttgggattctgacaagcagtagatgatagattttaatctt
ttaaagttcatattactacatagaagaggtgtacacttgataaataaaaa
atacatgtgtcctttatcccagtgatcttgctttaagaattctatcatgt
gtcacagccacaccaatcttcaagctatgtgcatcatgttttcactgaat
tgctgtagaaaa
gaattctcaaaaagttaaaattaaatcaacatgagacccaactactgata
acttcttttttattcccaaaagacttgaatgcctatgccacagatatttg
ttcacccattttaatggctgctatattcataatacataggaaatgaaaac
aatctaaatgagcttcaacataaaaatggataattaaagtgttgtacaca
tacactatagaatagtattcaattttaaagaaaatataacagatggacaa
agaatctcagacattgaagaaactgtaggaaaaatgaatacattagtcaa
agaaaatgttaaatctaaaaatctcctgacacaaaacatgtaggaaatct
ggaatagtatgaaaaagcaaaagctaagaaaaataggaatagaggaaaaa
cagaatcccagttcaaagtcccagaaaatatttgcaacaaaatcatagaa
aataaatgttctaatctaaagaagatgatgcctataatgatacaagaagc
atatagaacaccaaagagattggaccagaagagaaagtcaccctggcaca
taatcaaaacactaaatgtacagaacaaatcaagaatataaaaagttaca
aggggaaaagaccaaaagcagacctattagaattatttctgacttttcaa
tggagacactaaaccccagaagggcctgaaaagactgctaaagacactag
gagactacagatgccagcccagattattataccctgcataatataaatga
gaaataagatattccatcataaagctgaatttaaacaatagttatctata
aatctgccaccatagaagatgctagaaagaaaattccaacctaagaaggt
taactacatgcaagaaaacaccaagaacaaataatctcagacaagcaaaa
tcagaataacacacacaaaacaccactcacatcaccatcaccaacaacaa
aataacagggaagaacaatcattggtcattgatatgtctcatattaatag
tctcactcttccaaatcaaaaataacaacagctaacaggaacagatacaa
aaactggctcaatacttctgttaagtccaagaaaactcaactctacattt
atgataaactattctcaagtagtgaaaaagatatttcaagccaaatagga
ctttaaaaaaggccaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139270830_139271994
seq2: B6Ng01-293H04.b_44_1205 (reverse)

seq1  TTTTCTACAAACAATTCAGTGAAAACATGATGCACATAGCTTTGAGATTT  50
      |||||||| | |||||||||||||||||||||||||||||||  ||| ||
seq2  TTTTCTAC-AGCAATTCAGTGAAAACATGATGCACATAGCTTGAAGA-TT  48

seq1  GGTGTGGCTGGTGACACATGATAG-ATTCTTAAAAGCAAGATCACTGGGA  99
      ||||||||| |||||||||||||| |||||| ||||||||||||||||||
seq2  GGTGTGGCT-GTGACACATGATAGAATTCTT-AAAGCAAGATCACTGGGA  96

seq1  TAAAGGACACATGTATTTTTATTTTATCAAGTGTTACACCTCTTCTATGT  149
      ||||||||||||||||||||  ||||||||||| ||||||||||||||||
seq2  TAAAGGACACATGTATTTTTTATTTATCAAGTG-TACACCTCTTCTATGT  145

seq1  AGTAATATGAACTTTAAAAGATTAAAATCTATCATCTACTGCTTGTCAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATGAACTTTAAAAGATTAAAATCTATCATCTACTGCTTGTCAGA  195

seq1  ATCCCAAAATTCTTAGACCAGCCTGGAGCCCAGACTAAGAAAATACGAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAATTCTTAGACCAGCCTGGAGCCCAGACTAAGAAAATACGAAT  245

seq1  TTCTACATTGAAGTCC-TTAGGGGCTTTTTATTTTGTCTGTCAAGATAAC  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCTACATTGAAGTCCTTTAGGGGCTTTTTATTTTGTCTGTCAAGATAAC  295

seq1  CTAATATCAAATCAACCAGAAAACATTCTTATTTTATATTTGCTTTCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATCAAATCAACCAGAAAACATTCTTATTTTATATTTGCTTTCAAA  345

seq1  GTCCTCCTACATCTTCTAGACAACTTTATTTCCTTTATTAGAAAAAAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCTACATCTTCTAGACAACTTTATTTCCTTTATTAGAAAAAAATT  395

seq1  TTTTTGCTTGAAACTTCCTCTTTCTGATTTGAAAAGCTGTGTTTTTCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTTGAAACTTCCTCTTTCTGATTTGAAAAGCTGTGTTTTTCACA  445

seq1  GCTTTAGTCTTGATTTCTGTTTCGGTTTCTTTCTTTTTATATTAATAAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTCTTGATTTCTGTTTCGGTTTCTTTCTTTTTATATTAATAAAT  495

seq1  GCTGTTCTTTGACAATTTCATACATTCTGGTTACTTTCTCCCAACCCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTTTGACAATTTCATACATTCTGGTTACTTTCTCCCAACCCCTT  545

seq1  ATTTTCCTTCAGGGCCTGCCAGTCTGACTCCTTCCATATAAATCCCTGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTTCAGGGCCTGCCAGTCTGACTCCTTCCATATAAATCCCTGCA  595

seq1  ACATTCATTTGGTTTTTGTTCTGTCTAGTATCCAGTGGGGTTTTACTAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATTTGGTTTTTGTTCTGTCTAGTATCCAGTGGGGTTTTACTAGG  645

seq1  AACTGCCTGTATAATCCTGGGTTTTGCAACTAATTGTCAGAGATCTGTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTGTATAATCCTGGGTTTTGCAACTAATTGTCAGAGATCTGTGG  695

seq1  GCTCACTGGTGTGTATAAAACTGGGTGGTATCTATATTAGCTGCAAATAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGGTGTGTATAAAACTGGGTGGTATCTATATTAGCTGCAAATAG  745

seq1  ATCAGCAGGAAGTTGAAGGCCCCAAGCCTCTTCTTAGTCATACATGACTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGGAAGTTGAAGGCCCCAAGCCTCTTCTTAGTCATACATGACTT  795

seq1  TTAATAAGACCTGATTTGCATGGAATCAATGCCAGTTGTCACACATACTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGACCTGATTTGCATGGAATCAATGCCAGTTGTCACACATACTC  845

seq1  TTGAATTCATGATCTCTATGGCTGTGCTGTGCTGTGCTTGAAACATGGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCATGATCTCTATGGCTGTGCTGTGCTGTGCTTGAAACATGGCA  895

seq1  GTTTTGAAGCCCTTCTTCTTATCCTTCTGCTCTTCAATTTCAATCCTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAGCCCTTCTTCTTATCCTTCTGCTCTTCAATTTCAATCCTCTC  945

seq1  TTCCGAAAGGTTCTCTAAACATTTAAAGGAGTGGAATGAACTTCCTTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGAAAGGTTCTCTAAACATTTAAAGGAGTGGAATGAACTTCCTTTTC  995

seq1  AGCCATGTGCTTTTTCTATGTTTATGGCACTATACATAAATCTTCTCTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTGCTTTTTCTATGTTTATGGCACTATACATAAATCTTCTCTTG  1045

seq1  TAGAGCAGGCCTCAAATTAAAGAAGGCAGTAGTTGGTTACCCCTGTAATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCAGGCCTCAAATTAAAGAAGGCAGTAGTTGGTTACCCCTGTAATA  1095

seq1  GAAATGCCATTATCACACAAAATATCTGTATCTTTACTGGCAGGTTTATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCCATTATCACACAAAATATCTGTATCTTTACTGGCAGGTTTATA  1145

seq1  TGTAATTCACAGAATTC  1165
      |||||||||||||||||
seq2  TGTAATTCACAGAATTC  1162