BAC Information

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BAC

Clone NameB6Ng01-293K14
Chromosome2 (Build37)
Map Location 99,186,700 - 99,187,877
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042886
Downstream geneLOC621386, LOC668702, LOC100042907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293K14.bB6Ng01-293K14.g
ACCGA089988GA089989
length1,2161,159
definitionB6Ng01-293K14.b B6Ng01-293K14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgcagttgaatccttctcaacagtctgtgatgcgggaacactt
cattaccaccgtccccagctgaagagttctgaattcacgcagttgaatcc
ttctcaacagtctgtgttgcgggaacacttcattaccaccattccccagc
tgaagagttctgaatccacactggatccttctcaacagtctgttttacgg
gaacctttatgaccgtgacccgcagttcggaatgagggatcttccttgcg
ccggtgtgatggtagtttccgtcccaggttttctcgtcccaggtcttctc
gtcccggatcttctcgtcccgggtttcggcaccaactcttaacgcgttcg
ctaccggccaggaaagatgcaacaaaccggaatcttctgcggcaaagctt
tattgcttacatcttcaggagcaagagtgcaagagagagaaaaagaaagc
aagaacaagaaagcaagagaaagaaaaaaaaaagaacaagagagagagaa
agaacaagaacaagaaagcaagaagaacaagaaagcaagagagagaaaac
aagagagagaacaagaaagcaagagaaagaatggcaaaaccccgtccctt
ttaaggagaattatcctccgcctaggacgtattactccctgattggctgc
agcccatcggctcagttgtcatcacgagaaaggcagaacacatggcggga
aaactgcccctgcacgtgtgcagatttatgtttaccacttagaacacagc
tgtcagcgccatcttataatggcaaatgtgagggcggctcccaacagaga
cctacataagaatgttgccttgtgggactgagcaactactagatccttag
actatcattcacagatgctgctgaccattgttggggagttgggactacag
actgttaagtcatgaatgaaattccctttactatatagagactaaccata
atatctgtgacttctagggaaaccctaactaatacatttccaagccccct
tacccctccccttcctcagcatctaatgagagtgctctgtactcacccca
ccaactctgctcagtgccttatccatagcatactcttaaactttccacag
ggattaaagggctccccttccagtgaatgcaaagattaaggcaattcctt
ggcctatatatcctggcctggaatcccaatggagggtgccctccaagttg
atatacctccttcact
gaattcacattttcttattgtttacactggacaagtcagtgcacatagtc
ttacagaattgtcagaatacacacatcaagagagatatcactgttggagt
tgtagctttatatttgtgaaattcttgtcaaatattttaaatcatcagct
cataattttccattgaaacaaaattacttaaccttaaattttatttttac
tcattttagtgattcattttaaaataattttaacttacacaactggtcta
atttcaagattttgataattgataattatgtgatagcttctcaaaaaaaa
ccctatgatccagaacaatatgcttttcaatttattagcagacacttaaa
ttaattgctctccaaataagttttacttttatagatttcacaatctaaat
catgtgtaggtaaagatgtgtctctttccaatgtggagttcttaggaaaa
gtgtatgtgctgagttgtgatttaccattagctgctattacaaatgtgtg
tttgtctctatatcccaagcacaaactgacaaaagagtttgaggttaaat
tttttttggggggttcactaagtggatgagtacatataatggttataaac
ggtaaagaaaactgaggtgtaagtcatgtgggcaaagtgtttcttcctaa
gaaagcaaattcagcttgatcaagagcagtgactttcagggaatgtaggg
tgttaacactgtgacacaggtgaccttgagggaaactgaaaactgagtga
tcttagagatttgagaacagaaaagttgtgagtatcccaagagaggaaaa
actctattgtagaaaagatagtaaagtaagcagagtacaccagccatagg
tggttcagagttgaaattgagacagattttttcttattgctatgttctca
tgcaagttcagagaaagaggaaccaaaatgaattagcctctaagttttgt
aggccaataatacaagaagaaaaaaaaacacaatgatcataagtgttgtg
agtgagtgtgtatgtgtgtgtgtgtgcctgcatgcaagtctgcatgtttt
cagaaagctctggatactctcaaccataaccaagagaatgtacctattat
aaccaagacataaagttcatgattaaattagcaactgacagaatcgtgag
aaacagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99186700_99187877
seq2: B6Ng01-293K14.g_68_1226 (reverse)

seq1  AGACTGTTTCTCA-GATTCTTGTAAAATTTTGCTTATATTAATCAATGAA  49
      ||||||||||||| ||||| ||| |    ||||| || |||||| |||  
seq2  AGACTGTTTCTCACGATTC-TGTCA---GTTGCTAAT-TTAATC-ATG--  42

seq1  AATTTTATGTCTTTGTTTTATAATAAGTACTTTCTCTTGTTTATGGGTTT  99
      || |||||||||| |  |||||||| |||| |||||||| ||||||  ||
seq2  AACTTTATGTCTTGG--TTATAATAGGTACATTCTCTTGGTTATGG--TT  88

seq1  GGAAGAGTATAAAGAGCTTTCTTGAAAACATGCAGACTTGCATGCACGCA  149
      |  |||||||  ||||||||| |||||||||||||||||||||||| |||
seq2  G--AGAGTATCCAGAGCTTTC-TGAAAACATGCAGACTTGCATGCAGGCA  135

seq1  CACACACACACATACACACTCACTCACAAACACTTTATTGATCATTTGTG  199
      ||||||||||||||||||||||||||| |||||||   |||||| |||||
seq2  CACACACACACATACACACTCACTCAC-AACACTT--ATGATCA-TTGTG  181

seq1  TTTTTTTTTTCTTCTTGTATTATTGGCCTACAAAACTTAGAGGCTAATTC  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTTTTTCTTCTTGTATTATTGGCCTACAAAACTTAGAGGCTAATTC  230

seq1  ATTTTGGTTCCTCTTTCTCTGAACTTGCATGAGAACATAGCAATAAGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTCCTCTTTCTCTGAACTTGCATGAGAACATAGCAATAAGAAA  280

seq1  AAATCTGTCTCAATTTCAACTCTGAACCACCTATGGCTGGTGTACTCTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTCTCAATTTCAACTCTGAACCACCTATGGCTGGTGTACTCTGC  330

seq1  TTACTTTACTATCTTTTCTACAATAGAGTTTTTCCTCTCTTGGGATACTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTACTATCTTTTCTACAATAGAGTTTTTCCTCTCTTGGGATACTC  380

seq1  ACAACTTTTCTGTTCTCAAATCTCTAAGATCACTCAGTTTTCAGTTTCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTTCTGTTCTCAAATCTCTAAGATCACTCAGTTTTCAGTTTCCC  430

seq1  TCAAGGTCACCTGTGTCACAGTGTTAACACCCTACATTCCCTGAAAGTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCACCTGTGTCACAGTGTTAACACCCTACATTCCCTGAAAGTCA  480

seq1  CTGCTCTTGATCAAGCTGAATTTGCTTTCTTAGGAAGAAACACTTTGCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTGATCAAGCTGAATTTGCTTTCTTAGGAAGAAACACTTTGCCC  530

seq1  ACATGACTTACACCTCAGTTTTCTTTACCGTTTATAACCATTATATGTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACTTACACCTCAGTTTTCTTTACCGTTTATAACCATTATATGTAC  580

seq1  TCATCCACTTAGTGAACCCCCCAAAAAAAATTTAACCTCAAACTCTTTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACTTAGTGAACCCCCCAAAAAAAATTTAACCTCAAACTCTTTTG  630

seq1  TCAGTTTGTGCTTGGGATATAGAGACAAACACACATTTGTAATAGCAGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGTGCTTGGGATATAGAGACAAACACACATTTGTAATAGCAGCT  680

seq1  AATGGTAAATCACAACTCAGCACATACACTTTTCCTAAGAACTCCACATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAAATCACAACTCAGCACATACACTTTTCCTAAGAACTCCACATT  730

seq1  GGAAAGAGACACATCTTTACCTACACATGATTTAGATTGTGAAATCTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGACACATCTTTACCTACACATGATTTAGATTGTGAAATCTATA  780

seq1  AAAGTAAAACTTATTTGGAGAGCAATTAATTTAAGTGTCTGCTAATAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAACTTATTTGGAGAGCAATTAATTTAAGTGTCTGCTAATAAAT  830

seq1  TGAAAAGCATATTGTTCTGGATCATAGGGTTTTTTTTGAGAAGCTATCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGCATATTGTTCTGGATCATAGGGTTTTTTTTGAGAAGCTATCAC  880

seq1  ATAATTATCAATTATCAAAATCTTGAAATTAGACCAGTTGTGTAAGTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATCAATTATCAAAATCTTGAAATTAGACCAGTTGTGTAAGTTAA  930

seq1  AATTATTTTAAAATGAATCACTAAAATGAGTAAAAATAAAATTTAAGGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTAAAATGAATCACTAAAATGAGTAAAAATAAAATTTAAGGTT  980

seq1  AAGTAATTTTGTTTCAATGGAAAATTATGAGCTGATGATTTAAAATATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTTTGTTTCAATGGAAAATTATGAGCTGATGATTTAAAATATTT  1030

seq1  GACAAGAATTTCACAAATATAAAGCTACAACTCCAACAGTGATATCTCTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAATTTCACAAATATAAAGCTACAACTCCAACAGTGATATCTCTC  1080

seq1  TTGATGTGTGTATTCTGACAATTCTGTAAGACTATGTGCACTGACTTGTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGTGTATTCTGACAATTCTGTAAGACTATGTGCACTGACTTGTC  1130

seq1  CAGTGTAAACAATAAGAAAATGTGAATTC  1178
      |||||||||||||||||||||||||||||
seq2  CAGTGTAAACAATAAGAAAATGTGAATTC  1159