BAC Information

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BAC

Clone NameB6Ng01-294F24
Chromosome2 (Build37)
Map Location 89,510,227 - 89,511,338
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924
Downstream geneOlfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294F24.bB6Ng01-294F24.g
ACCGA090519GA090520
length1,1251,096
definitionB6Ng01-294F24.b B6Ng01-294F24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatggaactacaaacaactttaggtaaagattcctgttataggct
ggaaaagagctgttattttactgtcatatactctaacaggaactatttga
attggggatgttaaaatgctacacaaatgaattcatcacaaactacaaac
atatttgatattagtatcacatacttattcatttagggaaagttgtcttt
gtctacaaagcaagtaaaacattatgtattataaatgacaataacttagg
attttcatcttattagacattttgttttaggtgctttgtttatatagatg
cataataactttagatacattaaatttaaaaaaataaaaaaatgtatcat
caaatgtttttaaatgtacaaggacaaatggctattatattccagttgct
tgatgttttatttatgtgtatatcttgaattttccaaagactaggttagt
atatctaaatagagaaaacaatacaggaatacatcacctgcaacagagat
ttgctatcatgttatcatgtagtattgtatagggtattacaagaattata
ctttattggattatgtaagatattttgatgaaagcacatgcaattggagc
aaatatcttcctccatgttcctcctctcctctttgtcactgcttttgttc
cttgaagccccctttgtttccctcagtagttttcctcccactctcatgtc
ttttgtgaattcatgattttctgtatttgttgaaagtttaaaactcacca
atgagagacaatgtaatttttttccttcttatagtgagttaaattgacta
tcttattttttcacagttgtgtactggcaagtgatataatgtcacccctc
ttcatgaatgaagaaagttcattgctaagaaattttactttttaaaatta
tacaaatatatttcaaaaatgaaatggtccaagtaactggattaaactgt
tattttctagaagtgtgataacatatttttagaatgaaagtagacaaata
attcttctcttattttgtaagaatcaattctttgataatttaacatttta
tataataagtctaataatagttataagtttattaccacctatttttaatt
attattataaatatttatggctagg
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggtttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagatggttcctctgttgattttgttaccctcaa
tcagcaggcgtgggagacaagctctctcctctgagtttcagtggtcagag
cagtctctgcaggcaagctctcctctttcggggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctctgtggctctcgccaggaaggtggctggttatctggagc
cgaagatggcgccgccccagaagctctgcgactctcgcccgtaccagaaa
cggctggcctctttattccacacagtcacccgtgcgaaggctcccgccgg
cgcctgtggcacaaacctctcaggccaggcagacccccgtgctctcacca
ggaaggtggccggctgtctggagctgaagatggcgccgcctcagaagctc
tgtgctctgcagtttcttatgtacactattatatcatctgcaaagaatga
taccttgatttcttcctttccaatttgtatccttttgatctccttctgtt
ttcttattgctttagctagatcttcaagtactatattgaatagatactgg
aaaagtgggcatccttcccttgtcaccaattttagtgggatttcttcaag
tatctctccatttaaattgatattggctattgctttgaggtattgcttta
tattgttagctatgggccttgaatttctgatctctccattattttttaac
atgcatgctaaggatgattcttgtatcctttctctttgttcttatttggg
tggattcgcctgagttggactattccctggccttcttcctctggggatag
gttggctcattttgttcaagaaacttccagggatacgccgtgtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89510227_89511338
seq2: B6Ng01-294F24.b_45_1169 (reverse)

seq1  CCTAG-CATAATTATTTAT-ATAAT-ATTAAAAATAG--TGTAATAAAC-  44
      ||||| ||||| ||||||| ||||| |||||||||||   ||||||||| 
seq2  CCTAGCCATAAATATTTATAATAATAATTAAAAATAGGTGGTAATAAACT  50

seq1  TAT-ACTA-TATTAGACTTA-TATATAAAATG-TAAATTATCAAAGAATT  90
      ||| |||| ||||||||||| ||||||||||| |||||||||||||||||
seq2  TATAACTATTATTAGACTTATTATATAAAATGTTAAATTATCAAAGAATT  100

seq1  GATTC-TACAAA--TAGAGAAGAATTATTTGTCTACTTTCATTCTAAAAT  137
      ||||| ||||||   |||||||||||||||||||||||||||||||||| 
seq2  GATTCTTACAAAATAAGAGAAGAATTATTTGTCTACTTTCATTCTAAAAA  150

seq1  ATTGTTATCACACTTCTAGAAAAATAACAGTTTAATCCAGTTACTTGGAC  187
        ||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TATGTTATCACACTTCTAG-AAAATAACAGTTTAATCCAGTTACTTGGAC  199

seq1  CATTTCATTTTTGAAATATATTTGTATAATTTTAAAAAGT-AAATTTCTT  236
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATTTCATTTTTGAAATATATTTGTATAATTTTAAAAAGTAAAATTTCTT  249

seq1  AGCAATGAACTTTCTTCATTCATGAAGAGGGGTGACATTATATCACTTGC  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAACTTTCTTCATTCATGAAGAGGGGTGACATTATATCACTTGC  299

seq1  CAGTACACAACTGTGAAAAAATAAGATAGTCAATTTAACTCACTATAAGA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACACAACTGTGAAAAAATAAGATAGTCAATTTAACTCACTATAAGA  349

seq1  AGGAAAAAAATTACATTGTCTCTCATTGGTGAGTTTTAAACTTTCAACAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAATTACATTGTCTCTCATTGGTGAGTTTTAAACTTTCAACAA  399

seq1  ATACAGAAAATCATGAATTCACAAAAGACATGAGAGTGGGAGGAAAACTA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAAATCATGAATTCACAAAAGACATGAGAGTGGGAGGAAAACTA  449

seq1  CTGAGGGAAACAAAGGGGGCTTCAAGGAACAAAAGCAGTGACAAAGAGGA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAAACAAAGGGGGCTTCAAGGAACAAAAGCAGTGACAAAGAGGA  499

seq1  GAGGAGGAACATGGAGGAAGATATTTGCTCCAATTGCATGTGCTTTCATC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAACATGGAGGAAGATATTTGCTCCAATTGCATGTGCTTTCATC  549

seq1  AAAATATCTTACATAATCCAATAAAGTATAATTCTTGTAATACCCTATAC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCTTACATAATCCAATAAAGTATAATTCTTGTAATACCCTATAC  599

seq1  AATACTACATGATAACATGATAGCAAATCTCTGTTGCAGGTGATGTATTC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTACATGATAACATGATAGCAAATCTCTGTTGCAGGTGATGTATTC  649

seq1  CTGTATTGTTTTCTCTATTTAGATATACTAACCTAGTCTTTGGAAAATTC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGTTTTCTCTATTTAGATATACTAACCTAGTCTTTGGAAAATTC  699

seq1  AAGATATACACATAAATAAAACATCAAGCAACTGGAATATAATAGCCATT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATACACATAAATAAAACATCAAGCAACTGGAATATAATAGCCATT  749

seq1  TGTCCTTGTACATTTAAAAACATTTGATGATACATTTTTTTATTTTTTTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGTACATTTAAAAACATTTGATGATACATTTTTTTATTTTTTTA  799

seq1  AATTTAATGTATCTAAAGTTATTATGCATCTATATAAACAAAGCACCTAA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATGTATCTAAAGTTATTATGCATCTATATAAACAAAGCACCTAA  849

seq1  AACAAAATGTCTAATAAGATGAAAATCCTAAGTTATTGTCATTTATAATA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGTCTAATAAGATGAAAATCCTAAGTTATTGTCATTTATAATA  899

seq1  CATAATGTTTTACTTGCTTTGTAGACAAAGACAACTTTCCCTAAATGAAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGTTTTACTTGCTTTGTAGACAAAGACAACTTTCCCTAAATGAAT  949

seq1  AAGTATGTGATACTAATATCAAATATGTTTGTAGTTTGTGATGAATTCAT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGTGATACTAATATCAAATATGTTTGTAGTTTGTGATGAATTCAT  999

seq1  TTGTGTAGCATTTTAACATCCCCAATTCAAATAGTTCCTGTTAGAGTATA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGCATTTTAACATCCCCAATTCAAATAGTTCCTGTTAGAGTATA  1049

seq1  TGACAGTAAAATAACAGCTCTTTTCCAGCCTATAACAGGAATCTTTACCT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTAAAATAACAGCTCTTTTCCAGCCTATAACAGGAATCTTTACCT  1099

seq1  AAAGTTGTTTGTAGTTCCATGAATTC  1112
      ||||||||||||||||||||||||||
seq2  AAAGTTGTTTGTAGTTCCATGAATTC  1125