BAC Information

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BAC

Clone NameB6Ng01-294I15
Chromosome2 (Build37)
Map Location 57,164,751 - 57,165,874
singlet/doubletsinglet
Overlap geneGpd2
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910
Downstream geneLOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294I15.bB6Ng01-294I15.g
ACCGA090640GA090641
length1,1871,116
definitionB6Ng01-294I15.b B6Ng01-294I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatagtaaaagcaatatatagcaaaaca
gtagccaacatcaaactaaatggagagaaacttgaagcaatcccactaaa
atcagggacaaggctgccctctctctccctttctattcaatatagtactt
gaagttctagctagagcaattagacaacaaaaggaggtcaaaaggataca
aattggaaattaaagtaaaaatatcactacttgaagatgatatgatagaa
tacttaagtgaccccaaaaactccatcagagaattcctatagctggtaaa
caacttcagcaaagtggccagatataaaattaactccaacaaatcagttg
ccttcctatactcaaaggataaacaggctgagcaagaaattagggaaaca
acaccctttacaatatataatatcttggtgtgactctaaacgaacaaata
aaagatctatatgaaaagaacctcaaatctctaaagaaagaaatcaaaga
agacctcagaagttggaaagatgtcccatgctcatgaattggcaggatta
atatagtaaaaatggccatctagctgaaagcaatctgcagattcaatgaa
atccccatcaaaacttcaactcaattcttcatagagttagaaagagcatt
ttttcaaattcatttggaaaaacaaaagaccctagatagtgaaaactatt
ctcaacaataaaagaacttttggaggaatcagcatccctgacctcaagct
gtactgcagagcaattgtgttaaaaactgcatggtattagtacagtgaca
ggtaggtagatgaatggaatagaattgaagacccaaaaatggacctacat
gcctatggttacttgatctttgacaaaggagctaaaaccatccattggaa
aaagacagcattttcttttttttttttttcccatttttataggtatttaa
ctcatttacatttcatgctataccaaagtccccattatcacccaccccac
tcccctgccaccactcccctttttggcctgtatccctgttactgggcata
taaagttgcagttcatggcctctctttcaatggatggcgactagcatctt
tgatatatatgcagcttaagtcaaggctcagggactgggtagccttaaat
ggttcacttatgttgcgaatcttagctctgcaacctc
gaattcagctggtgagagagcaaagccaatttaatctctggctcccctga
ggtaaatgtagttcacggtcctgcccccactccaacctcagctataatcc
ctggctcctggaggtaagaatgcagtgaagtgaggaaaatcctgcagcag
gatataatgatccaaaatgacagggacaataatgacaatgaatttcatgt
ctcccagtcatgagctgaagatgcttgactaggctgacgtatacaattaa
attgttacaggtacagcaggagcttgcacttagctgtgcgctttggggag
acgatgcctcgggcagaaggcagatagtggagtctagcctcttttgttag
gatcagcctattcctcctttaggcaggcaccgagaccgtatactttaata
aaagaaccccaagctaaagacaagttttttaaggtgtttatctactttga
aaacttaatcaattactaaataccataagcatgttttttttttttttgtt
ttgttctttttagtcttatttttccccattgagttccaggaacataagtg
aaatctaaggtggtgtcattaatccttatttatgatacctgtaagcaaag
aggttgagataattaacacagagagtctccagagttaggggaataggttg
aaaggataaacaaacatcgcagatttatgatctccctgcctgtactcaac
tctgggctacctctgctgcttcccacaggtttttaaggtggagtgctatc
tcccagaagaaaggttaaaggctcatgggtcacacagggtcatctactgt
gttttagcaagaatacactgaaaggtctgatttttactatcaaatactta
gaaatatctacttttgtgtgcttcacatgtgtatggtgcataaatacagt
ggtccatgtgtctagtttataattaaccatagctattgaggctatataat
gatattcactttacttttgaagtacttaatttttctttcttttttcgctc
actggggagtagtcatttatttttttgaatacctggtttatgaatgtttt
tcaattagtatatttatcaaagaaaaaatggtgaaagatgactacattgc
ctttcatttcttaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57164751_57165874
seq2: B6Ng01-294I15.g_68_1183

seq1  GAATTCAGCTGGTGAGAGAGCAAAGCCAATTTAATCTCTGGCTCCCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTGGTGAGAGAGCAAAGCCAATTTAATCTCTGGCTCCCCTGA  50

seq1  GGTAAATGTAGTTCACGGTCCTGCCCCCACTCCAACCTCAGCTATAATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATGTAGTTCACGGTCCTGCCCCCACTCCAACCTCAGCTATAATCC  100

seq1  CTGGCTCCTGGAGGTAAGAATGCAGTGAAGTGAGGAAAATCCTGCAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCCTGGAGGTAAGAATGCAGTGAAGTGAGGAAAATCCTGCAGCAG  150

seq1  GATATAATGATCCAAAATGACAGGGACAATAATGACAATGAATTTCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATGATCCAAAATGACAGGGACAATAATGACAATGAATTTCATGT  200

seq1  CTCCCAGTCATGAGCTGAAGATGCTTGACTAGGCTGACGTATACAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGTCATGAGCTGAAGATGCTTGACTAGGCTGACGTATACAATTAA  250

seq1  ATTGTTACAGGTACAGCAGGAGCTTGCACTTAGCTGTGCGCTTTGGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTACAGGTACAGCAGGAGCTTGCACTTAGCTGTGCGCTTTGGGGAG  300

seq1  ACGATGCCTCGGGCAGAAGGCAGATAGTGGAGTCTAGCCTCTTTTGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGCCTCGGGCAGAAGGCAGATAGTGGAGTCTAGCCTCTTTTGTTAG  350

seq1  GATCAGCCTATTCCTCCTTTAGGCAGGCACCGAGACCGTATACTTTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCCTATTCCTCCTTTAGGCAGGCACCGAGACCGTATACTTTAATA  400

seq1  AAAGAACCCCAAGCTAAAGACAAGTTTTTTAAGGTGTTTATCTACTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACCCCAAGCTAAAGACAAGTTTTTTAAGGTGTTTATCTACTTTGA  450

seq1  AAACTTAATCAATTACTAAATACCATAAGCATGTTTTTTTTTTTTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAATCAATTACTAAATACCATAAGCATGTTTTTTTTTTTTTTGTT  500

seq1  TTGTTCTTTTTAGTCTTATTTTTCCCCATTGAGTTCCAGGAACATAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTTTAGTCTTATTTTTCCCCATTGAGTTCCAGGAACATAAGTG  550

seq1  AAATCTAAGGTGGTGTCATTAATCCTTATTTATGATACCTGTAAGCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAAGGTGGTGTCATTAATCCTTATTTATGATACCTGTAAGCAAAG  600

seq1  AGGTTGAGATAATTAACACAGAGAGTCTCCAGAGTTAGGGGAATAGGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGATAATTAACACAGAGAGTCTCCAGAGTTAGGGGAATAGGTTG  650

seq1  AAAGGATAAACAAACATCGCAGATTTATGATCTCCCTGCCTGTACTCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATAAACAAACATCGCAGATTTATGATCTCCCTGCCTGTACTCAAC  700

seq1  TCTGGGCTACCTCTGCTGCTTCCCACAGGTTTTTAAGGTGGAGTGCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCTACCTCTGCTGCTTCCCACAGGTTTTTAAGGTGGAGTGCTATC  750

seq1  TCCCAGAAGAAAGGTT-AAGGCTCATGGGTCACACAGGGTCATCTACTGT  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCCAGAAGAAAGGTTAAAGGCTCATGGGTCACACAGGGTCATCTACTGT  800

seq1  GTTTTAGCAAGAATACACTGAAAGGTCTGATTTTTACTATCAAATACTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGCAAGAATACACTGAAAGGTCTGATTTTTACTATCAAATACTTA  850

seq1  GAAATATCTACTTTTGTGTGCTTCACATGTGTATGGTGCATAAATACAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATCTACTTTTGTGTGCTTCACATGTGTATGGTGCATAAATACAGT  900

seq1  GGTCCATGTGTCTAGTTTATAATTAACCATAGCTATTGAGGCTATATAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATGTGTCTAGTTTATAATTAACCATAGCTATTGAGGCTATATAAT  950

seq1  GATATTCACTTTACTTTTGAAGTACTTAATTTTTCTTTTCTTTTTTCGCT  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GATATTCACTTTACTTTTGAAGTACTTAATTTTTC-TTTCTTTTTTCGCT  999

seq1  CACTGGGGAAGTAGTCATTTATTTTTT--GATACCTGGTTTATTGAAATG  1047
      |||||||| ||||||||||||||||||   |||||||||||||   ||||
seq2  CACTGGGG-AGTAGTCATTTATTTTTTTGAATACCTGGTTTAT--GAATG  1046

seq1  TTTTTCAAATAAGTATATTTATCAAAAGAAAAAAATTGTGAAAGATGAAC  1097
      |||||| ||| |||||||||||||||   ||||||| |||||||||||  
seq2  TTTTTC-AATTAGTATATTTATCAAA--GAAAAAATGGTGAAAGATGA--  1091

seq1  TTACCAATTGCTTTTCATTTCTTAAGG  1124
       |||  ||||| |||||||||||||||
seq2  CTAC--ATTGCCTTTCATTTCTTAAGG  1116