BAC Information

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BAC

Clone NameB6Ng01-294O10
Chromosome2 (Build37)
Map Location 46,899,933 - 46,901,108
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294O10.bB6Ng01-294O10.g
ACCGA090907GA090908
length7541,176
definitionB6Ng01-294O10.b B6Ng01-294O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgcagattttcaccagactttcaaaaaaaatctattgctaat
gctacttaagttacaacaaaacaaatcaaacaacaacctcataagaaaaa
gaccatttccaaactccttctatggatccactattactgtaatataaaaa
agaaggtgaaacacaacaaataagaaaactatactttaatatcactgatg
attgattcacacacactcaataaagtaattaaaataggggacaaacatgc
aacaaaacaaaaacatcatttattatgaccacattggttttaaaacctga
aatacatgtttccacacactcaagaccataaatcttgtaggacacataaa
tggatttaaaggtaaaattttcatcataacctcaatagatgtaaaacaaa
aaatccagatgccttcatataaatcctaaagaatgtagttcttgagggaa
cgaacctcaatataacaaaaattatatatgagaaacacagtactaacatc
aacatatatgaaaaaaatattggtgcaattccactggagtcaggataaga
cagggatgttgactatcacctttctttttcagttctgtgctcaaagcact
agttggaacattaagcaaaagtagcagaggattgcctggttggtcatcta
taggaggagaggcccttggttctgtaaaggcttgatatcccagtgtagag
gaatgccagaaccaggaagtggaagtgggtgggttggtgagcagggggag
aggt

gaattcatttctgacacagggtatggtactggtgtgtatgcctttaatcc
cagtgtcttagaggtcaggacagaaggatgagaagtcaaatgttattttc
agctgtgttgttagtttgatatcagcttgtactacataggggattgtcca
aaacacttcacttttaaaaattttatagccttacatagagtagaatattt
ttattcgattatttatttcttttaaatctaaatggttcctttctctatct
gtctgtctatctatctatctatctatctatctatctatctatctatctat
catctatatgtctaccaatatgttgtggataattacgtatatatttgata
ttctacaaaattcaatttttatatttacagttattttacatatttacaaa
gtagtgctaatactcactggaagatagactcctaagctttagtgtataaa
atctagagatataaacagttcacaattatgtagtgtatataatgaaacac
atggaaaatgttagtataaaaatctgaaagtttcttaaaggagccgtaac
tatggtaaaactaagaaatgctatgtcttgatattatatccaaggacaga
tttagagaaaaagcagcatatgacaaaaaaatgtaacagtattttttaca
gttattaagtttttgaataccaaattttacaaatatcatgttttctttta
tagaacacagagttgtaaatgcaatgttaagccattgtaaactgattctg
tttattggctccaaaatacttttaatgataatttagaatttagaaaaatc
tttccatcactgctctgcatgatgtctttctaaatgggttacttattgat
ccttagtaaaaatacatgggtgaacatctggggaccaatttttacatcaa
gggaattattgactgtattcattctaaagcaacatattgtatggagtgta
aatgatctctttcgaactgggtctacaatagacttacactttgttcagga
gtaaataaaatttaaaacatacacatggagggcatcctcacgtaccttca
ggacctgccatgagtaccaatctttggttaattatccaaatgtattcaac
ttttatagcctatcagcccaatttttaagagagtgggaataacatggagt
tactggaagtgggacatccctttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46899933_46901108
seq2: B6Ng01-294O10.g_66_1241

seq1  GAATTCATTTCTGACACAGGGTATGGTACTGGTGTGTATGCCTTTAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTGACACAGGGTATGGTACTGGTGTGTATGCCTTTAATCC  50

seq1  CAGTGTCTTAGAGGTCAGGACAGAAGGATGAGAAGTCAAATGTTATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTTAGAGGTCAGGACAGAAGGATGAGAAGTCAAATGTTATTTTC  100

seq1  AGCTGTGTTGTTAGTTTGATATCAGCTTGTACTACATAGGGGATTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTTGTTAGTTTGATATCAGCTTGTACTACATAGGGGATTGTCCA  150

seq1  AAACACTTCACTTTTAAAAATTTTATAGCCTTACATAGAGTAGAATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTCACTTTTAAAAATTTTATAGCCTTACATAGAGTAGAATATTT  200

seq1  TTATTCGATTATTTATTTCTTTTAAATCTAAATGGTTCCTTTCTCTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCGATTATTTATTTCTTTTAAATCTAAATGGTTCCTTTCTCTATCT  250

seq1  GTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  300

seq1  CATCTATATGTCTACCAATATGTTGTGGATAATTACGTATATATTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATATGTCTACCAATATGTTGTGGATAATTACGTATATATTTGATA  350

seq1  TTCTACAAAATTCAATTTTTATATTTACAGTTATTTTACATATTTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAAAATTCAATTTTTATATTTACAGTTATTTTACATATTTACAAA  400

seq1  GTAGTGCTAATACTCACTGGAAGATAGACTCCTAAGCTTTAGTGTATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCTAATACTCACTGGAAGATAGACTCCTAAGCTTTAGTGTATAAA  450

seq1  ATCTAGAGATATAAACAGTTCACAATTATGTAGTGTATATAATGAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGATATAAACAGTTCACAATTATGTAGTGTATATAATGAAACAC  500

seq1  ATGGAAAATGTTAGTATAAAAATCTGAAAGTTTCTTAAAGGAGCCGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAATGTTAGTATAAAAATCTGAAAGTTTCTTAAAGGAGCCGTAAC  550

seq1  TATGGTAAAACTAAGAAATGCTATGTCTTGATATTATATCCAAGGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAAAACTAAGAAATGCTATGTCTTGATATTATATCCAAGGACAGA  600

seq1  TTTAGAGAAAAAGCAGCATATGACAAAAAAATGTAACAGTATTTTTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAAAAAGCAGCATATGACAAAAAAATGTAACAGTATTTTTTACA  650

seq1  GTTATTAAGTTTTTGAATACCAAATTTTACAAATATCATGTTTTCTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAAGTTTTTGAATACCAAATTTTACAAATATCATGTTTTCTTTTA  700

seq1  TAGAACACAGAGTTGTAAATGCAATGTTAAGCCATTGTAAACTGATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACAGAGTTGTAAATGCAATGTTAAGCCATTGTAAACTGATTCTG  750

seq1  TTTATTGGCTCCAAAATACTTTTAATGATAATTTAGAATTTAGAAAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGCTCCAAAATACTTTTAATGATAATTTAGAATTTAGAAAAATC  800

seq1  TTTCCATCACTGCTCTGCATGATGTCTTTCTAAATGGGTTACTTATTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCACTGCTCTGCATGATGTCTTTCTAAATGGGTTACTTATTGAT  850

seq1  CCTTAGTAAAAATACATGGGTGAACATCTGGGGACCAATTTTTACATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTAAAAATACATGGGTGAACATCTGGGGACCAATTTTTACATCAA  900

seq1  -GGAATTATTGACTGTATTCATTCTAAAGCAACATATTTGTAT-GAGTGT  948
       ||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  GGGAATTATTGACTGTATTCATTCTAAAGCAACATA-TTGTATGGAGTGT  949

seq1  AAATGATCTCTTTCGAACT-GGTCTACAATAGACTTACACTTTGTTCA-G  996
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  AAATGATCTCTTTCGAACTGGGTCTACAATAGACTTACACTTTGTTCAGG  999

seq1  AGTAAATAAAATTT-AAACATACACATGGAGGGCAATCCCACGTACCCTT  1045
      |||||||||||||| ||||||||||||||||||||  | |||||| ||||
seq2  AGTAAATAAAATTTAAAACATACACATGGAGGGCATCCTCACGTA-CCTT  1048

seq1  CA-GACCTGCCATGAGTACCAATCCTTTTGTTTATTTATCCCAATGTATT  1094
      || |||||||||||||||||||||  |||| ||| |||||| |||||| |
seq2  CAGGACCTGCCATGAGTACCAATC--TTTGGTTAATTATCCAAATGTA-T  1095

seq1  TAAACTTCTTATAGCCTTATCAGCCAAATTTTTA--AGAGTGAGATAAAC  1142
      | ||||| |||||||| |||||||| ||||||||  |||||| ||  |||
seq2  TCAACTT-TTATAGCC-TATCAGCCCAATTTTTAAGAGAGTGGGAATAAC  1143

seq1  AAGGAGGAAAAGAAAAGTGGAGCATCCCTTTGAA  1176
      | ||||  |  |  ||||||  ||||||||||||
seq2  ATGGAGTTACTG-GAAGTGGGACATCCCTTTGAA  1176


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