BAC Information

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BAC

Clone NameB6Ng01-294P23
Chromosome2 (Build37)
Map Location 62,994,969 - 62,996,136
singlet/doubletsinglet
Overlap geneKcnh7
Upstream geneSlc4a10, Dpp4, Gcg, Fap, Ifih1, Gca
Downstream geneEG667257, Fign
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294P23.bB6Ng01-294P23.g
ACCGA090981GA090982
length1,1751,159
definitionB6Ng01-294P23.b B6Ng01-294P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggagag
aaagtaggaacaaagaggaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagttaaggttaggtgggaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggagttctctaggaaaaggagcctgtgctcatcgctggatgggct
cggggagccagctcttagtagctctgaagcagatgaagaattctcctctg
aagaaacagactgggaggaagaagcagctcattatgagaaaaaagggtac
cagccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctgg
cgaaggccagtttgctgattggcctcagggcagtcggcttcaaggtccgc
cctatgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagagg
cagtgcgcagactcattcattcccagagaggaacaaaggaaaatacaaca
ggcatttccggtctttgaaggagccgagggtgggcgtgtccacgctccgg
tagaatacttacaaattaaagagcttgccgagtcggtccgtaaatacgga
accaatgctaattttacctttggtgcagttagacaggctcgctggcatgg
cactaactcctgccgactgacaaacggttgtaaaagccgctctccctagt
atgggcaatatatgggaatggagagcgcttgcacgaagctgcacagcgca
gccctgagcaacgcagctgctttgactcagagcagagagatgacttttga
cttggtaacgggttcaggagctatctgcctgatcagacaactacattggg
gagctatgccggaatttctccgctattagtctgaagggcgcctctcctcg
agccaaggttgaaacacatctgcga
gaattctcttgatttgaatgccacttgtgacaaagatatttaatgtgcca
tagtgtcaatgaattgcttcatcaagaatatcaagactcttttgccaaga
cagttgaaaacacctaaaaaatttacttagaaagaagaatgtaagcagac
aggacagaatgattgataaaataaagtcacttaatagcagtatattgtaa
caagtcagcaataaaaagttgcaaatcatcccaacaaaatttgaaatata
aaacacactaattcatgcatttatggtatgctattcaattccttttttat
caattagaatttcctttgcacacataagcaaggttctctagtgaattttc
tgcaagaatagataaataaagttactgcataaacctctgctaatggagat
atgtttatgtttaagaatagaaaaaacaaaacccttcacactgtagcact
aattgtattcatttccaaaaatgtctaaaatcctggtgtcaccataatgt
ctaataattgagagacaatgttgggcttagttaattatgcaatttcttat
cattcacagaaataagccttgctatactgttgtcacagaatattccttct
gtgtgacgaattattgcagaataatgatgatgtgatatttgcacataaaa
cacacaatgcatactagtatagtaattacgccatgaattccaaatcttga
taataccttgtgtatattctagataaccatgcatcaaagtactcttaatg
ctgtccaacctactctagtttactagacccaattgactagtgaataatac
aactatatccatactattctgggcacaaagcctgcggagcagtccagtac
attgtagcaatctgttgcagcatcacagattatagctcgtattctgacct
gtcttgagttgtttggtgtgagccaatgccttccgtactgatggaggttc
cacacctccctcataataagtcagagacacaaaatcattgtatgattcca
aataactccttacgattttttttcatgccaaacatgtattttcatgcaag
atcaaattaccatacatagctgctatgacagtattaaacatgatttgcct
gaaacctgtttttggtaatcaagtcaagtgccagactttctcaagatttt
ctaatatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62994969_62996136
seq2: B6Ng01-294P23.g_67_1225

seq1  GAATTCTCTTGATTTGAATGCCACTTGTGACAAAGATATTTAATGTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGATTTGAATGCCACTTGTGACAAAGATATTTAATGTGCCA  50

seq1  TAGTGTCAATGAATTGCTTCATCAAGAATATCAAGACTCTTTTGCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCAATGAATTGCTTCATCAAGAATATCAAGACTCTTTTGCCAAGA  100

seq1  CAGTTGAAAACACCTAAAAAATTTACTTAGAAAGAAGAATGTAAGCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAAAACACCTAAAAAATTTACTTAGAAAGAAGAATGTAAGCAGAC  150

seq1  AGGACAGAATGATTGATAAAATAAAGTCACTTAATAGCAGTATATTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGAATGATTGATAAAATAAAGTCACTTAATAGCAGTATATTGTAA  200

seq1  CAAGTCAGCAATAAAAAGTTGCAAATCATCCCAACAAAATTTGAAATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGCAATAAAAAGTTGCAAATCATCCCAACAAAATTTGAAATATA  250

seq1  AAACACACTAATTCATGCATTTATGGTATGCTATTCAATTCCTTTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACTAATTCATGCATTTATGGTATGCTATTCAATTCCTTTTTTAT  300

seq1  CAATTAGAATTTCCTTTGCACACATAAGCAAGGTTCTCTAGTGAATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGAATTTCCTTTGCACACATAAGCAAGGTTCTCTAGTGAATTTTC  350

seq1  TGCAAGAATAGATAAATAAAGTTACTGCATAAACCTCTGCTAATGGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAATAGATAAATAAAGTTACTGCATAAACCTCTGCTAATGGAGAT  400

seq1  ATGTTTATGTTTAAGAATAGAAAAAACAAAACCCTTCACACTGTAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGTTTAAGAATAGAAAAAACAAAACCCTTCACACTGTAGCACT  450

seq1  AATTGTATTCATTTCCAAAAATGTCTAAAATCCTGGTGTCACCATAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATTCATTTCCAAAAATGTCTAAAATCCTGGTGTCACCATAATGT  500

seq1  CTAATAATTGAGAGACAATGTTGGGCTTAGTTAATTATGCAATTTCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATTGAGAGACAATGTTGGGCTTAGTTAATTATGCAATTTCTTAT  550

seq1  CATTCACAGAAATAAGCCTTGCTATACTGTTGTCACAGAATATTCCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAGAAATAAGCCTTGCTATACTGTTGTCACAGAATATTCCTTCT  600

seq1  GTGTGACGAATTATTGCAGAATAATGATGATGTGATATTTGCACATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACGAATTATTGCAGAATAATGATGATGTGATATTTGCACATAAAA  650

seq1  CACACAATGCATACTAGTATAGTAATTACGCCATGAATTCCAAATCTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATGCATACTAGTATAGTAATTACGCCATGAATTCCAAATCTTGA  700

seq1  TAATACCTTGTGTATATTCTAGATAACCATGCATCAAAGTACTCTTAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCTTGTGTATATTCTAGATAACCATGCATCAAAGTACTCTTAATG  750

seq1  CTGTCCAACCTACTCTAGTTTACTAGACCCAATTGACTAGTGAATAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAACCTACTCTAGTTTACTAGACCCAATTGACTAGTGAATAATAC  800

seq1  AACTATATCCATACTATTCTGGGCACAAAGCCTGCGGAGCAGTCCAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATCCATACTATTCTGGGCACAAAGCCTGCGGAGCAGTCCAGTAC  850

seq1  ATTGTAGCAATCTGTTGCAGCATCACAGATTATAGCTCGTATTCTGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGCAATCTGTTGCAGCATCACAGATTATAGCTCGTATTCTGACCT  900

seq1  GTCTTGAGTTGTTTGGTGTGAGCCAATGCCTTCCGTACTGATGGAGGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGTTGTTTGGTGTGAGCCAATGCCTTCCGTACTGATGGAGGTTC  950

seq1  CACACCTCCCCTCAT-ATAAGTCAGGAGACACAAAATCATTGTTATGATT  999
      ||||||| ||||||| |||||||| ||||||||||||||||| ||||| |
seq2  CACACCT-CCCTCATAATAAGTCA-GAGACACAAAATCATTG-TATGA-T  996

seq1  TCCAAATAAACTCCTTTACGA-TTTTTTTCATGCCAAAACATGTATTTTC  1048
      ||||||| |||||| |||||| ||||||||||||| ||||||||||||||
seq2  TCCAAAT-AACTCC-TTACGATTTTTTTTCATGCC-AAACATGTATTTTC  1043

seq1  ATTGCCAAGATACAAAATACAATACATAGCTGCTAATGACAGTAT--AAC  1096
      ||   |||||| |||| ||| ||||||||||||| ||||||||||  |||
seq2  AT--GCAAGAT-CAAATTACCATACATAGCTGCT-ATGACAGTATTAAAC  1089

seq1  ATGATTTGCCCTGAAAACTGTTTTTGGTAATCTAGTCAAGTGCACAGA-T  1145
      |||||||| ||||||| ||||||||||||||| |||||||||| |||| |
seq2  ATGATTTG-CCTGAAACCTGTTTTTGGTAATCAAGTCAAGTGC-CAGACT  1137

seq1  TTCTCAAAGATTTTCTAATATAG  1168
      ||||| |||||||||||||||||
seq2  TTCTC-AAGATTTTCTAATATAG  1159