BAC Information

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BAC

Clone NameB6Ng01-298E14
Chromosome2 (Build37)
Map Location 40,299,145 - 40,300,270
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps2_560.1, LOC100042604, Magmas-ps
Downstream geneLOC666531, Lrp1b, LOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298E14.bB6Ng01-298E14.g
ACCGA093434GA093435
length1,127773
definitionB6Ng01-298E14.b B6Ng01-298E14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgttcaaatgagtttctatttaaaattgctgctgagaatgag
ctgtagtttcctactttttaaatacatcaaatcatttttcagtgttatac
tctttcatcaatgagcttgaaaagtgagcatgaaaatttctgtttacttt
tgtcatgcaatttatgatattagctgtgagcccaagatacaataattata
caactactgaactatggtgcctgaagggtcactactttttccaaattctc
ttattaaaactaatggttttgaaaaaaatatgtttgggagtatgttgttc
tttccatgttctaattggaatactctgacatttggagaaataccttaaga
acaaaatccacatctactataaaataaatcctgaatgacattttcagaga
acagaatactttggaaaaattttgctcatttgactactatttcaacatta
tttctttcaaaaaagtccattagttgtctttctaagcaggtgaaaatgtc
aggaaaaaaatgccattttaagcaattgcctaagtaataatgatgtgttc
ttactgtgaactctacattgaaaagaacttctctttcttcagaactgaag
ttaaataatcattgacagaaaatttcaacatcacatttattattttttgt
gaagacatttaacatgtctttcctagcaatgatttcaagcaattatgtga
gaattctaactgaacatatgaatcaatatatttttgtttgtttgtttgtt
tgtttagagacagggtttctctgtatagccttggctgtcctggaactaac
tttgtagaccaggttggcctcgaactcagaaatccgcctgcctctgcccc
cccaagtggtgtgattaaagtcgtgtgccaccactgcctggctgaatcaa
tatttaatatatattataaaataagtattttgatctagctgtattagcca
tgcagtacccattctctttacagttatttcctaagcttaactagagaatt
gctatagagatgagttctaatttttccatgatgctgatgaataaatgact
tttgtaataagtgaaaatcaattgttttgtttaaacaaggtaactaacca
gctcacaaaaagttaaacatgttctga

gaattcaaggaccatacctaaatataataaaagcaatttagagcaaacca
acagccaatatcaaattaaatggagagatacttaaagcaatcccactgaa
atcagggacaataggaggatgcccactctctgcatgtctattcaatatag
tacttgaagctctagcaagagcaataagacaacaaaaggagagcaaaggg
ataaaaaattggcaaagaagaagtcatatatgtagatgatatggtagtat
gtataagcaatcccaaaaaatctactagagaatttctacagctgataaac
aacctatagcaaagtggtcagatataaaattaattcaaacaaaacagtag
cctttctttatacaaatgataaacagactgagaaaaaattaaggagacac
tatccttcacaatagtcacaaataatataaaatactttgtgataaccctc
tccaaacaattgaaagatctgacaatatcttcaagtctctcaagaaagaa
atcgaagacctcagaaaatgaagagatcttccatgctagtttagttgtag
aatcaacatattaaaaatggccatcctaccaaatgcaatatacagtctca
acataaatccattaaaattccaaaacagttctccaagatatcgaaagagc
aattctcaaatttatgtggaaaacaaaaacccaggattttaaaaaaatga
tttacaataaaatctagtagaagtgggggtgggggcatccacatggagat
tgggtgggtgagaaggaggtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40299145_40300270
seq2: B6Ng01-298E14.b_47_1173

seq1  GAATTCATTGTTCAAATGAGTTTCTATTTAAAATTGCTGCTGAGAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTCAAATGAGTTTCTATTTAAAATTGCTGCTGAGAATGAG  50

seq1  CTGTAGTTTCCTACTTTTTAAATACATCAAATCATTTTTCAGTGTTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTTTCCTACTTTTTAAATACATCAAATCATTTTTCAGTGTTATAC  100

seq1  TCTTTCATCAATGAGCTTGAAAAGTGAGCATGAAAATTTCTGTTTACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATCAATGAGCTTGAAAAGTGAGCATGAAAATTTCTGTTTACTTT  150

seq1  TGTCATGCAATTTATGATATTAGCTGTGAGCCCAAGATACAATAATTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCAATTTATGATATTAGCTGTGAGCCCAAGATACAATAATTATA  200

seq1  CAACTACTGAACTATGGTGCCTGAAGGGTCACTACTTTTTCCAAATTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACTGAACTATGGTGCCTGAAGGGTCACTACTTTTTCCAAATTCTC  250

seq1  TTATTAAAACTAATGGTTTTGAAAAAAATATGTTTGGGAGTATGTTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAACTAATGGTTTTGAAAAAAATATGTTTGGGAGTATGTTGTTC  300

seq1  TTTCCATGTTCTAATTGGAATACTCTGACATTTGGAGAAATACCTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTTCTAATTGGAATACTCTGACATTTGGAGAAATACCTTAAGA  350

seq1  ACAAAATCCACATCTACTATAAAATAAATCCTGAATGACATTTTCAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCCACATCTACTATAAAATAAATCCTGAATGACATTTTCAGAGA  400

seq1  ACAGAATACTTTGGAAAAATTTTGCTCATTTGACTACTATTTCAACATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATACTTTGGAAAAATTTTGCTCATTTGACTACTATTTCAACATTA  450

seq1  TTTCTTTCAAAAAAGTCCATTAGTTGTCTTTCTAAGCAGGTGAAAATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCAAAAAAGTCCATTAGTTGTCTTTCTAAGCAGGTGAAAATGTC  500

seq1  AGGAAAAAAATGCCATTTTAAGCAATTGCCTAAGTAATAATGATGTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAATGCCATTTTAAGCAATTGCCTAAGTAATAATGATGTGTTC  550

seq1  TTACTGTGAACTCTACATTGAAAAGAACTTCTCTTTCTTCAGAACTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGAACTCTACATTGAAAAGAACTTCTCTTTCTTCAGAACTGAAG  600

seq1  TTAAATAATCATTGACAGAAAATTTCAACATCACATTTATTATTTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATCATTGACAGAAAATTTCAACATCACATTTATTATTTTTTGT  650

seq1  GAAGACATTTAACATGTCTTTCCTAGCAATGATTTCAAGCAATTATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACATTTAACATGTCTTTCCTAGCAATGATTTCAAGCAATTATGTGA  700

seq1  GAATTCTAACTGAACATATGAATCAATATATTTTTGTTTGTTTGTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTGAACATATGAATCAATATATTTTTGTTTGTTTGTTTGTT  750

seq1  TGTTTAGAGACAGGGTTTCTCTGTATAGCCTTGGCTGTCCTGGAACTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGAGACAGGGTTTCTCTGTATAGCCTTGGCTGTCCTGGAACTAAC  800

seq1  TTTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCCC  850

seq1  CCCAAGTGGTGTGATTAAAGTCGTGTGCCACCACTGCCTGGCTGAATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGGTGTGATTAAAGTCGTGTGCCACCACTGCCTGGCTGAATCAA  900

seq1  TATTTAATATATATTATAAAATAAGTATTTTGATCTAGCTGTATTAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATATATATTATAAAATAAGTATTTTGATCTAGCTGTATTAGCCA  950

seq1  TGCAGTACCCATTCTCTTTACAGTTATTTCCTAAGCTTAACTAGAG-ATT  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCAGTACCCATTCTCTTTACAGTTATTTCCTAAGCTTAACTAGAGAATT  1000

seq1  GCTATAGAGATTGAGTTCTAATTTTTCCATGATGCTGATG-ATAAATGAC  1048
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  GCTATAGAGA-TGAGTTCTAATTTTTCCATGATGCTGATGAATAAATGAC  1049

seq1  TTTTTGTAAT-AGTGAAAATCAATGTTTTTGTTTAACCAAGGTAAACTAA  1097
       ||||||||| |||||||||||||  |||||||||| |||||| |||| |
seq2  -TTTTGTAATAAGTGAAAATCAATTGTTTTGTTTAAACAAGGT-AACT-A  1096

seq1  ACCAGCTCACAAAAAG-TAAACATG-TCTGA  1126
      |||||||||||||||| |||||||| |||||
seq2  ACCAGCTCACAAAAAGTTAAACATGTTCTGA  1127


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