BAC Information

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BAC

Clone NameB6Ng01-298L24
Chromosome2 (Build37)
Map Location 71,705,081 - 71,821,287
singlet/doubletdoublet
Overlap genePdk1, Rapgef4
Upstream geneMettl8, 4833418A01Rik, Cybrd1, Dync1i2, Slc25a12, LOC667528, Hat1, LOC100040177, Metapl1, LOC100040207, Dlx1, Dlx1as, Dlx2, Gm1631, Itga6
Downstream geneLOC100040270, B230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928, 6430710C18Rik, Sp3, Hspe1-ps5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298L24.bB6Ng01-298L24.g
ACCGA093777GA093778
length952323
definitionB6Ng01-298L24.b B6Ng01-298L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,705,081 - 71,706,030)(71,820,965 - 71,821,287)
sequence
gaattctaggacagttgaactacatagtgagactctgtctcaaaacaaaa
caaaataaaataaaacaaaaacagtttcccctaaaacaaatcctgatcca
tagatggcctccaaaccatgcactctgggtcttcctgttaagaaggggaa
tggggtggtgaaatgctagatattctataaggcaaaagctcccagaggct
tgattgccttccagctgtttcgtaactctgtaaactgtagaaaaacagat
acagcaaatcacgctgttagcggagggaccacctgtgctgtttcccagca
aaagccaactatacagactgcaagtctttttttgtattacctgttgtttg
actttttcttaagtctttgaattggctctatagtttgttgtttttttttt
ctagtgctctcctttaatttatgtgtaaataaaaattttgacacatggta
atgtattgctgcatgatcttcattcctatcctttttcttgaaaatgatct
ttctagtgcattaagcaggagtctcaggcaggaaatgacaatgtactcgg
aagggaaatggaataggatttcgggaagggactatttttaggggtgtgag
ttaagccactgaggaactgtggccacactagaggaacacaaagccgacca
gcagggaggggcaggggaatagtgacctttctctccttttgtactctcag
aggataaagtcagagggcattggagaccgggtcaaacttgttttccactg
cttcccccaagcttttctgctaaacccgtcttcatggatcataaattctt
ggtaaatttagagtctggctcaagtctgctaaattaaggaggaggaggga
ttataagtatggcacattgtggcacatgcctttaacccagcattcagaag
accaaacacagttgaatctattcgagtttgaagtcagcccggagatcata
ca
tgggatcgaggccacagaatagacaagaaggtcttcacactgtggaaata
aaacatatacagggtacttcctagcttccaaagcactaggaagctttttc
ctcccttctgctgggggtgagccaaggacactcagttttcaaactcagga
agtaaaagagatgaggtacaagctcagagcgggtgggggctctgagccta
aacatccgcagcttatcgatctgtccactcgcctgcaggtcaggaacttg
aggctcaagaaaaggagggcctttttgtagtgttttgtttgtttgtttgt
tttgggttttgtttgttttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_71705081_71706030
seq2: B6Ng01-298L24.b_48_999

seq1  GAATTCTAGGACAGTTGAACTACATAGTGAGACTCTGTCTCAAAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACAGTTGAACTACATAGTGAGACTCTGTCTCAAAACAAAA  50

seq1  CAAAATAAAATAAAACAAAAACAGTTTCCCCTAAAACAAATCCTGATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAATAAAACAAAAACAGTTTCCCCTAAAACAAATCCTGATCCA  100

seq1  TAGATGGCCTCCAAACCATGCACTCTGGGTCTTCCTGTTAAGAAGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGCCTCCAAACCATGCACTCTGGGTCTTCCTGTTAAGAAGGGGAA  150

seq1  TGGGGTGGTGAAATGCTAGATATTCTATAAGGCAAAAGCTCCCAGAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGGTGAAATGCTAGATATTCTATAAGGCAAAAGCTCCCAGAGGCT  200

seq1  TGATTGCCTTCCAGCTGTTTCGTAACTCTGTAAACTGTAGAAAAACAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCCTTCCAGCTGTTTCGTAACTCTGTAAACTGTAGAAAAACAGAT  250

seq1  ACAGCAAATCACGCTGTTAGCGGAGGGACCACCTGTGCTGTTTCCCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAATCACGCTGTTAGCGGAGGGACCACCTGTGCTGTTTCCCAGCA  300

seq1  AAAGCCAACTATACAGACTGCAAGTCTTTTTTTGTATTACCTGTTGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAACTATACAGACTGCAAGTCTTTTTTTGTATTACCTGTTGTTTG  350

seq1  ACTTTTTCTTAAGTCTTTGAATTGGCTCTATAGTTTGTTGTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCTTAAGTCTTTGAATTGGCTCTATAGTTTGTTGTTTTTTTTTT  400

seq1  CTAGTGCTCTCCTTTAATTTATGTGTAAATAAAAATTTTGACACATGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCTCTCCTTTAATTTATGTGTAAATAAAAATTTTGACACATGGTA  450

seq1  ATGTATTGCTGCATGATCTTCATTCCTATCCTTTTTCTTGAAAATGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGCTGCATGATCTTCATTCCTATCCTTTTTCTTGAAAATGATCT  500

seq1  TTCTAGTGCATTAAGCAGGAGTCTCAGGCAGGAAATGACAATGTACTCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGCATTAAGCAGGAGTCTCAGGCAGGAAATGACAATGTACTCGG  550

seq1  AAGGGAAATGGAATAGGATTTCGGGAAGGGACTATTTTTAGGGGTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAATGGAATAGGATTTCGGGAAGGGACTATTTTTAGGGGTGTGAG  600

seq1  TTAAGCCACTGAGGAACTGTGGCCACACTAGAGGAACACAAAGCCGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCACTGAGGAACTGTGGCCACACTAGAGGAACACAAAGCCGACCA  650

seq1  GCAGGGAGGGGCAGGGGAATAGTGACCTTTCTCTCCTTTTGTACTCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGGGGCAGGGGAATAGTGACCTTTCTCTCCTTTTGTACTCTCAG  700

seq1  AGGATAAAGTCAGAGGGCATTGGAGACCGGGTCAAACTTGTTTTCCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAGTCAGAGGGCATTGGAGACCGGGTCAAACTTGTTTTCCACTG  750

seq1  CTTCCCCCAAGCTTTTCTGCTAAACCCGTCTTCATGGATCATAAATTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCCAAGCTTTTCTGCTAAACCCGTCTTCATGGATCATAAATTCTT  800

seq1  GGTAAATTTAGAGTCTGGCTCAAGTCTGCTAAATTAAGGAGGAGGAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATTTAGAGTCTGGCTCAAGTCTGCTAAATTAAGGAGGAGGAGGGA  850

seq1  TTATAAGTATGGCACATTGTGGCACATGCCTTTAACCCCAGCATTCAGAA  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTATAAGTATGGCACATTGTGGCACATGCCTTTAA-CCCAGCATTCAGAA  899

seq1  GA-CAAACACAGGTGAATCTA-TCGAGTTTGAAGTCAG-CCGGAGATCAT  947
      || ||||||||| |||||||| |||||||||||||||| |||||||||||
seq2  GACCAAACACAGTTGAATCTATTCGAGTTTGAAGTCAGCCCGGAGATCAT  949

seq1  ACA  950
      |||
seq2  ACA  952

seq1: chr2_71820965_71821287
seq2: B6Ng01-298L24.g_73_395 (reverse)

seq1  ACACAAAACAAACAAAACCCAAAACAAACAAACAAACAAAACACTACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACAAACAAAACCCAAAACAAACAAACAAACAAAACACTACAAA  50

seq1  AAGGCCCTCCTTTTCTTGAGCCTCAAGTTCCTGACCTGCAGGCGAGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCTCCTTTTCTTGAGCCTCAAGTTCCTGACCTGCAGGCGAGTGGA  100

seq1  CAGATCGATAAGCTGCGGATGTTTAGGCTCAGAGCCCCCACCCGCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCGATAAGCTGCGGATGTTTAGGCTCAGAGCCCCCACCCGCTCTGA  150

seq1  GCTTGTACCTCATCTCTTTTACTTCCTGAGTTTGAAAACTGAGTGTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACCTCATCTCTTTTACTTCCTGAGTTTGAAAACTGAGTGTCCTT  200

seq1  GGCTCACCCCCAGCAGAAGGGAGGAAAAAGCTTCCTAGTGCTTTGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACCCCCAGCAGAAGGGAGGAAAAAGCTTCCTAGTGCTTTGGAAGC  250

seq1  TAGGAAGTACCCTGTATATGTTTTATTTCCACAGTGTGAAGACCTTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTACCCTGTATATGTTTTATTTCCACAGTGTGAAGACCTTCTTG  300

seq1  TCTATTCTGTGGCCTCGATCCCA  323
      |||||||||||||||||||||||
seq2  TCTATTCTGTGGCCTCGATCCCA  323