BAC Information

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BAC

Clone NameB6Ng01-298N02
Chromosome2 (Build37)
Map Location 41,637,518 - 41,799,345
singlet/doubletdoublet
Overlap geneLrp1b
Upstream geneLOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298N02.bB6Ng01-298N02.g
ACCGA093829GA093830
length1,179533
definitionB6Ng01-298N02.b B6Ng01-298N02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,798,162 - 41,799,345)(41,637,518 - 41,638,053)
sequence
gaattcattatcactgactctattaagattggctttcaactctattttaa
tctatatagccattaatggaaaataatttcaggttttccaaatccttaca
ttataatttataggacattcttatgccatagatgtagtagccattaatgc
ttagactcatatttaagtacaacatttttacataatatgtttttttttct
attcacctatgtaagtgctcttttagttagttaggggaaacagctactac
taagccacaagcaagccatgacacagaaatgtaaactttatttttctatt
tgttaaaccttatccattaggaaaatatatggagaagatagagtattttt
gcccattcttattatctaacaggaaaataatttatttcaactaagagtaa
atacaaaactctgaaatgatgtgtttaaaacgcacatccatgctctagaa
taatggttttatgttatactagtttttttttaagttatctttgaagtcca
gatttagtaatttagagcatattaggtgaagtttatcaagtcacaattga
aaaaaatcaggtaagaaatcactggaacacagatagatggatggcctgga
aaattaaaagtagcacattgttcattcaggaatagatgttgcagggaaac
tttataaaaatttaataaggtagatttaaaacctgacaaatgagtcctga
agatatgtattagagtgcagttaaaatcaaagagcatgaaaatgggaaaa
gatgaaaccttttgtgctttgtgggtaccaacacaaaatacacagctcta
attttaaaggaaataagaggtagattgttcaggagccattttcagtgatc
gttgcctggagacacagatttaggttactccaaattccatgcttcaacat
gggaagaagtttcatggattttttatatttttacataagagagaaagtcg
taattcaaggaaattttaaaatagatgggagaagtatagcaagaagtggg
aaggtttttctataagctgattcttatctgagattttgaatagtggatct
agtgtctactacaatataatattgtagtagatctattataaattcagaat
aggtctataaacctttatcatcttatagtacagatgttaggtctactgaa
ccaagaaccgaatcagaaaaggctttttt

cttggaataattttgagaaagattctcaagagacctgtaacaaataatag
ctgacatctttccaaagactgttcagtgtgatttcacaaggcaaggtctc
tgaaaaccctgctctctttctcttgagaagttccagcagaaaggaagacc
tgcaaagttccaggagagatgatcttacctcaaatatgcaaccctttact
ccctagaatgacagtgctaaatgttctggtcctttgtccctctttctaca
tgattttgtcacacatttaagcttcaatcagaatttgcaagggactacat
taatccttcaaatattaataatctttatatttgtgtctcacctctcacta
ttattttgatggaaataaagaaaagggagaaggagggagtgagagtgtgg
aaggaagtagtagagaaggggaggtaagaaaatggaagcaaaaggagata
agattgacagaaaaaaaagcaaacaaagaaccttttcatttaagttcttc
ttgcaggattgatttccgggaaatctaaagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41798162_41799345
seq2: B6Ng01-298N02.b_47_1225 (reverse)

seq1  AAAAAAGCCTTTTCTTGTTCGTCTCTGTGTCATGTAGACACTAACATCTT  50
      |||||||||||||||  ||||  |||  ||   |||||| ||||||||| 
seq2  AAAAAAGCCTTTTCTGATTCGGTTCTTGGTTCAGTAGAC-CTAACATCT-  48

seq1  GTTACTAATAGATGAATAAAGTGTTATAGA-CTA-TCTGAATTTATTATT  98
        |||||  ||||| ||||||  ||||||| ||| |||||||||| || |
seq2  -GTACTATAAGATG-ATAAAGGTTTATAGACCTATTCTGAATTTA-TAAT  95

seq1  AGATCTACTACAATA-TATTATGTAGGTAGACCACTAGATCCCACTAATT  147
      ||||||||||||||| |||  |||| ||||| |||||||| ||||| |||
seq2  AGATCTACTACAATATTATATTGTA-GTAGA-CACTAGAT-CCACT-ATT  141

seq1  CAAAATCTCAGATAGAATTCAGCTTATAGAAAAACCTTCCCACCTTCTTG  197
      ||||||||||||||  | |||||||||||||||||||||||| |||||||
seq2  CAAAATCTCAGATAAGAATCAGCTTATAGAAAAACCTTCCCA-CTTCTTG  190

seq1  CTATACTTCTCCCATCTATTTTAAAATTTCCTTGAATTACGACTTTCTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTCTCCCATCTATTTTAAAATTTCCTTGAATTACGACTTTCTCT  240

seq1  CTTATGTAAAAATAT-AAAAATCCATGAAACTTCTT-CCATGTTGAAGCA  295
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  CTTATGTAAAAATATAAAAAATCCATGAAACTTCTTCCCATGTTGAAGCA  290

seq1  TGGAATTTGGAGTAACCTAAATCTGTGTCTCCAGGCAACGATCACTGAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTGGAGTAACCTAAATCTGTGTCTCCAGGCAACGATCACTGAAA  340

seq1  ATGGCTCCTGAACAATCTACCTCTTATTTCCTTTAAAATTAGAGCTGTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCTGAACAATCTACCTCTTATTTCCTTTAAAATTAGAGCTGTGT  390

seq1  ATTTTGTGTTGGTACCCACAAAGCACAAAAGGTTTCATCTTTTCCCATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTTGGTACCCACAAAGCACAAAAGGTTTCATCTTTTCCCATTT  440

seq1  TCATGCTCTTTGATTTTAACTGCACTCTAATACATATCTTCAGGACTCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCTTTGATTTTAACTGCACTCTAATACATATCTTCAGGACTCAT  490

seq1  TTGTCAGGTTTTAAATCTACCTTATTAAATTTTTATAAAGTTTCCCTGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGGTTTTAAATCTACCTTATTAAATTTTTATAAAGTTTCCCTGCA  540

seq1  ACATCTATTCCTGAATGAACAATGTGCTACTTTTAATTTTCCAGGCCATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTCCTGAATGAACAATGTGCTACTTTTAATTTTCCAGGCCATC  590

seq1  CATCTATCTGTGTTCCAGTGATTTCTTACCTGATTTTTTTCAATTGTGAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCTGTGTTCCAGTGATTTCTTACCTGATTTTTTTCAATTGTGAC  640

seq1  TTGATAAACTTCACCTAATATGCTCTAAATTACTAAATCTGGACTTCAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAACTTCACCTAATATGCTCTAAATTACTAAATCTGGACTTCAAA  690

seq1  GATAACTTAAAAAAAAACTAGTATAACATAAAACCATTATTCTAGAGCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTTAAAAAAAAACTAGTATAACATAAAACCATTATTCTAGAGCAT  740

seq1  GGATGTGCGTTTTAAACACATCATTTCAGAGTTTTGTATTTACTCTTAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGCGTTTTAAACACATCATTTCAGAGTTTTGTATTTACTCTTAGT  790

seq1  TGAAATAAATTATTTTCCTGTTAGATAATAAGAATGGGCAAAAATACTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAATTATTTTCCTGTTAGATAATAAGAATGGGCAAAAATACTCT  840

seq1  ATCTTCTCCATATATTTTCCTAATGGATAAGGTTTAACAAATAGAAAAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTCCATATATTTTCCTAATGGATAAGGTTTAACAAATAGAAAAAT  890

seq1  AAAGTTTACATTTCTGTGTCATGGCTTGCTTGTGGCTTAGTAGTAGCTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTACATTTCTGTGTCATGGCTTGCTTGTGGCTTAGTAGTAGCTGT  940

seq1  TTCCCCTAACTAACTAAAAGAGCACTTACATAGGTGAATAGAAAAAAAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTAACTAACTAAAAGAGCACTTACATAGGTGAATAGAAAAAAAAA  990

seq1  CATATTATGTAAAAATGTTGTACTTAAATATGAGTCTAAGCATTAATGGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATGTAAAAATGTTGTACTTAAATATGAGTCTAAGCATTAATGGC  1040

seq1  TACTACATCTATGGCATAAGAATGTCCTATAAATTATAATGTAAGGATTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACATCTATGGCATAAGAATGTCCTATAAATTATAATGTAAGGATTT  1090

seq1  GGAAAACCTGAAATTATTTTCCATTAATGGCTATATAGATTAAAATAGAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACCTGAAATTATTTTCCATTAATGGCTATATAGATTAAAATAGAG  1140

seq1  TTGAAAGCCAATCTTAATAGAGTCAGTGATAATGAATTC  1184
      |||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCCAATCTTAATAGAGTCAGTGATAATGAATTC  1179


seq1: chr2_41637518_41638053
seq2: B6Ng01-298N02.g_65_602

seq1  GAATTCCTTGGAATAATTTTGAGAAAGATTCTCAAGAGACCTGTAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGAATAATTTTGAGAAAGATTCTCAAGAGACCTGTAACAAA  50

seq1  TAATAGCTGACATCTTTCCAAAGACTGTTCAGTGTGATTTCACAAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTGACATCTTTCCAAAGACTGTTCAGTGTGATTTCACAAGGCAA  100

seq1  GGTCTCTGAAAACCCTGCTCTCTTTCTCTTGAGAAGTTCCAGCAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGAAAACCCTGCTCTCTTTCTCTTGAGAAGTTCCAGCAGAAAGG  150

seq1  AAGACCTGCAAAGTTCCAGGAGAGATGATCTTACCTCAAATATGCAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGCAAAGTTCCAGGAGAGATGATCTTACCTCAAATATGCAACCC  200

seq1  TTTACTCCCTAGAATGACAGTGCTAAATGTTCTGGTCCTTTGTCCCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCCCTAGAATGACAGTGCTAAATGTTCTGGTCCTTTGTCCCTCTT  250

seq1  TCTACATGATTTTGTCACACATTTAAGCTTCAATCAGAATTTGCAAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGATTTTGTCACACATTTAAGCTTCAATCAGAATTTGCAAGGGA  300

seq1  CTACATTAATCCTTCAAATATTAATAATCTTTATATTTGTGTCTCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTAATCCTTCAAATATTAATAATCTTTATATTTGTGTCTCACCTC  350

seq1  TCACTATTATTTTGATGGAAATAAAGAAAAGGGAGAAGGAGGGAGTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATTATTTTGATGGAAATAAAGAAAAGGGAGAAGGAGGGAGTGAGA  400

seq1  GTGTGGAAGGAAGTAGTAGAGAAGGGGAGGTAAGAAAATGGAAGCAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAGGAAGTAGTAGAGAAGGGGAGGTAAGAAAATGGAAGCAAAAG  450

seq1  GAGAGAAGATAGACAGAAAAAAAAGCAAAC-AAGAACC-TTTCATTTAAG  498
      |||| ||||| ||||||||||||||||||| ||||||| |||||||||||
seq2  GAGATAAGATTGACAGAAAAAAAAGCAAACAAAGAACCTTTTCATTTAAG  500

seq1  TTCTTCTTGCAGGATTGACTTCTGGGAAATCGAAAGCT  536
      |||||||||||||||||| ||| |||||||| ||||||
seq2  TTCTTCTTGCAGGATTGATTTCCGGGAAATCTAAAGCT  538


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