BAC Information

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BAC

Clone NameB6Ng01-299B16
Chromosome2 (Build37)
Map Location 167,173,569 - 167,353,761
singlet/doubletdoublet
Overlap geneB4galt5, Slc9a8, Spata2, Zfp313
Upstream genePpia-ps2_2197.1, BC067047, Trp53rk, Arfgef2, LOC670802, Cse1l, Stau1, LOC383774, Ddx27, AI481105, 1500012F01Rik, LOC668950, Kcnb1, Ptgis, LOC668951
Downstream geneSnai1, Ube2v1, AI840826, Cebpb, LOC100043728, Ptpn1, 2310033K02Rik, Pard6b, Adnp, Dpm1, Mocs3, LOC100043908, Kcng1, LOC668952, Nfatc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299B16.bB6Ng01-299B16.g
ACCGA094039GA094040
length412630
definitionB6Ng01-299B16.b B6Ng01-299B16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,353,344 - 167,353,761)(167,173,569 - 167,174,198)
sequence
aaagccctaattaccaggtagcccaattagtgttaacttccaagaaagaa
ttctatgagggtcatgaggtccaagccaacctgggttacgtgtctcaaaa
aaaaaacaaaccaaacaaacaaacaaaaaactggcattgtacgtacaggg
tatacagtcatacatgcagggaaaatacttatacgtataaaaaaattcaa
actaataaaattaaacaaaattcacagctgaccatccactccatctccac
aaggacactgctgggatgctgccctgtgttgcaccggcgaacaaagcaag
caactgctcaggtggtagctgtaccctggcctgctacatagaagtaacag
agcgtgagggagcccaggagccccaagaagtcagaggtggggaaggagag
ggagagggagag
gaattctcgccctcggccccacccccaacagcatcttctcatttttcacc
aagggctgaagttttcactagcactccaagaccacactaagggaggcaag
tcgcattccttaaaactctttccttctgtcccccaaactacctgtaacag
cgaatatttatttattatgtatgtatttatttcgaagacgttgggcgtcc
gctatagggagaaaagcttaaagggcatttatggccctctgtcctttaaa
ggctgggattcgtgtccccattttacagagaagagaagctgagggcccaa
ggtcatacaggacatctgacctcagtgtcctctgcctttaaccctctcgc
tgcctttgccttctcatcagcgtccagtctgttccgggaagggctcgttt
tctctccaggcggtctccccctctaaagggcggaccttggagaactgcta
cccattccgtttcttctctgggcgacccccccctcccttccacctggcac
cgcttcttcaaggcccctgtcacagcacctcctccatggccaattcaaac
ttcccatcggtccccagagcaggtcgggtccgctatgagcggcgggcgag
cggcgggctccagggaggaggggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_167353344_167353761
seq2: B6Ng01-299B16.b_45_462 (reverse)

seq1  CTCTCCCTCTCCCTCTCCTTCCCCACCTCTGACTTCTTGGGGCTCCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTCTCCCTCTCCTTCCCCACCTCTGACTTCTTGGGGCTCCTGGG  50

seq1  CTCCCTCACGCTCTGTTACTTCTATGTAGCAGGCCAGGGTACAGCTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCACGCTCTGTTACTTCTATGTAGCAGGCCAGGGTACAGCTACCA  100

seq1  CCTGAGCAGTTGCTTGCTTTGTTCGCCGGTGCAACACAGGGCAGCATCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCAGTTGCTTGCTTTGTTCGCCGGTGCAACACAGGGCAGCATCCC  150

seq1  AGCAGTGTCCTTGTGGAGATGGAGTGGATGGTCAGCTGTGAATTTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTCCTTGTGGAGATGGAGTGGATGGTCAGCTGTGAATTTTGTTT  200

seq1  AATTTTATTAGTTTGAATTTTTTTATACGTATAAGTATTTTCCCTGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATTAGTTTGAATTTTTTTATACGTATAAGTATTTTCCCTGCATG  250

seq1  TATGACTGTATACCCTGTACGTACAATGCCAGTTTTTTGTTTGTTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTGTATACCCTGTACGTACAATGCCAGTTTTTTGTTTGTTTGTTT  300

seq1  GGTTTGTTTTTTTTTTGAGACACGTAACCCAGGTTGGCTTGGACCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTTTTTTTTTGAGACACGTAACCCAGGTTGGCTTGGACCTCATG  350

seq1  ACCCTCATAGAATTCTTTCTTGGAAGTTAACACTAATTGGGCTACCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCATAGAATTCTTTCTTGGAAGTTAACACTAATTGGGCTACCTGGT  400

seq1  AATTAGGGCTTTGAATTC  418
      ||||||||||||||||||
seq2  AATTAGGGCTTTGAATTC  418

seq1: chr2_167173569_167174198
seq2: B6Ng01-299B16.g_69_698

seq1  GAATTCTCGCCCTCGGCCCCACCCCCAACAGCATCTTCTCATTTTTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGCCCTCGGCCCCACCCCCAACAGCATCTTCTCATTTTTCACC  50

seq1  AAGGGCTGAAGTTTTCACTAGCACTCCAAGACCACACTAAGGGAGGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTGAAGTTTTCACTAGCACTCCAAGACCACACTAAGGGAGGCAAG  100

seq1  TCGCATTCCTTAAAACTCTTTCCTTCTGTCCCCCAAACTACCTGTAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATTCCTTAAAACTCTTTCCTTCTGTCCCCCAAACTACCTGTAACAG  150

seq1  CGAATATTTATTTATTATGTATGTATTTATTTCGAAGACGTTGGGCGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATTTATTTATTATGTATGTATTTATTTCGAAGACGTTGGGCGTCC  200

seq1  GCTATAGGGAGAAAAGCTTAAAGGGCATTTATGGCCCTCTGTCCTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGGGAGAAAAGCTTAAAGGGCATTTATGGCCCTCTGTCCTTTAAA  250

seq1  GGCTGGGATTCGTGTCCCCATTTTACAGAGAAGAGAAGCTGAGGGCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGATTCGTGTCCCCATTTTACAGAGAAGAGAAGCTGAGGGCCCAA  300

seq1  GGTCATACAGGACATCTGACCTCAGTGTCCTCTGCCTTTAACCCTCTCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATACAGGACATCTGACCTCAGTGTCCTCTGCCTTTAACCCTCTCGC  350

seq1  TGCCTTTGCCTTCTCATCAGCGTCCAGTCTGTTCCGGGAAGGGCTCGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGCCTTCTCATCAGCGTCCAGTCTGTTCCGGGAAGGGCTCGTTT  400

seq1  TCTCTCCAGGCGGTCTCCCCCTCTAAAGGGCGGACCTTGGAGAACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGGCGGTCTCCCCCTCTAAAGGGCGGACCTTGGAGAACTGCTA  450

seq1  CCCATTCCGTTTCTTCTCTGGGCGACCCCCCCCTCCCTTCCACCTGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCCGTTTCTTCTCTGGGCGACCCCCCCCTCCCTTCCACCTGGCAC  500

seq1  CGCTTCTTCAAGGCCCCTGTCACAGCACCTCCTCCATGGCCAATTCAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCTTCAAGGCCCCTGTCACAGCACCTCCTCCATGGCCAATTCAAAC  550

seq1  TTCCCATCGGTCCCCAGAGCAGGTCGGGTCCGCTATGAGCGGCGGGCGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATCGGTCCCCAGAGCAGGTCGGGTCCGCTATGAGCGGCGGGCGAG  600

seq1  CGGCGGGCTCCAGGGAGGAGGGGGGGGAGG  630
      ||||||||||||||||||||||||||||||
seq2  CGGCGGGCTCCAGGGAGGAGGGGGGGGAGG  630