BAC Information

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BAC

Clone NameB6Ng01-299D12
Chromosome2 (Build37)
Map Location 155,402,352 - 155,594,891
singlet/doubletdoublet
Overlap geneGss, Myh7b, Trpc4ap, Edem2, Procr
Upstream genePxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2
Downstream geneMmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299D12.bB6Ng01-299D12.g
ACCGA094120GA094121
length1,141426
definitionB6Ng01-299D12.b B6Ng01-299D12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,402,352 - 155,403,483)(155,594,466 - 155,594,891)
sequence
gaattctacttgacatagtgtttgtcctgcttgtaaaataatcagaatat
gaggcttcttggaacttcgcagggcttagcaagcccagaaaggcacactt
ggaggcaatagtgtccttttatataaacagtgagttctacgaccagctca
ccatcactgtacctctctgaaccccggtcccttttctgtaaagcaggggg
aggagcagtgctgcctgggcgcaaacatcctgagagcccgcatggagagc
acttggtgctcacgagagcacaactcagttccactcggacactgagcagc
tgctagcagaggcctctcaaccatctggaaatcacttaccgagcatcttc
acacatctggaacgtggttgagaagtaggaagaaagcaaagaaaacactt
ctaagcagttacaatggacaccataaaattcccagatcaaacctgacctc
gcgctcttcacacacggttacaataaccaggatccctgatttccttcccc
ctgagccacagcaaagcagaaggcaaagggacgaaagcagaggactccta
ctccaagtgcactgacagcagtgagatgggaactcaaccccagccgcaca
ggccttctaacgctttctaaccctaggtgtggcaccagtgagcttcagca
agatgcaatcaccaacggtccgtcatcatgatgacgtccgtgcaacatgg
aaacagtaacttatatagtcagcatctcatattatagaaggaaaccccca
aaactccactaaagtatttttggcatttaaaggtatatgtttctattcct
agaaatagcccttcgtcccccagtgaagtctagcaaaggagaagctgcca
cacccaggagtgctgatgcgatggcagggtactacctgccacctttccat
attcttacttagctgagccatagagctcccaaggctttggcgatcccaga
gtcagtcacttgctgggttattggacaggatcttggaagctacttttggt
cttatcaaggacattgagacgatgtactgattgagaaaagagatggctgc
taagttaagtggatggacagatacccgttctgcccaatgaacctcacaca
tacatacaggaccattaccttctgaacttcaagcaagcact
gaattcctgttgtagcagctacaagctaaagagggctctgcaccttaatg
tagaaggtaatttatctacattgtatcactctacactgaacagctcctct
gtgtgttggagtctaaggagaaggcaatggggaaatgacttgtccaatga
tggaactagagtaggagcagtagcagaatccaagggtcagacaccaaagc
tccagccctgttcctttgttcatttatttattcattaaaatgtctaactt
tctataaacagtcttaagcagctgttactaggcttagggtcacagcctat
gccccagaggcctgtcctcagtgagccaattaaaacaaccaaattgattg
tgggagacacacacacacacacacacacagaggaaaggagaaggagaagg
agagggataagcttagggaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155402352_155403483
seq2: B6Ng01-299D12.b_44_1184

seq1  GAATTCTACTTGACATAGTGTTTGTCCTGCTTGTAAAATAATCAGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTGACATAGTGTTTGTCCTGCTTGTAAAATAATCAGAATAT  50

seq1  GAGGCTTCTTGGAACTTCGCAGGGCTTAGCAAGCCCAGAAAGGCACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCTTGGAACTTCGCAGGGCTTAGCAAGCCCAGAAAGGCACACTT  100

seq1  GGAGGCAATAGTGTCCTTTTATATAAACAGTGAGTTCTACGACCAGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAATAGTGTCCTTTTATATAAACAGTGAGTTCTACGACCAGCTCA  150

seq1  CCATCACTGTACCTCTCTGAACCCCGGTCCCTTTTCTGTAAAGCAGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTGTACCTCTCTGAACCCCGGTCCCTTTTCTGTAAAGCAGGGGG  200

seq1  AGGAGCAGTGCTGCCTGGGCGCAAACATCCTGAGAGCCCGCATGGAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGTGCTGCCTGGGCGCAAACATCCTGAGAGCCCGCATGGAGAGC  250

seq1  ACTTGGTGCTCACGAGAGCACAACTCAGTTCCACTCGGACACTGAGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTGCTCACGAGAGCACAACTCAGTTCCACTCGGACACTGAGCAGC  300

seq1  TGCTAGCAGAGGCCTCTCAACCATCTGGAAATCACTTACCGAGCATCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCAGAGGCCTCTCAACCATCTGGAAATCACTTACCGAGCATCTTC  350

seq1  ACACATCTGGAACGTGGTTGAGAAGTAGGAAGAAAGCAAAGAAAACACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTGGAACGTGGTTGAGAAGTAGGAAGAAAGCAAAGAAAACACTT  400

seq1  CTAAGCAGTTACAATGGACACCATAAAATTCCCAGATCAAACCTGACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGTTACAATGGACACCATAAAATTCCCAGATCAAACCTGACCTC  450

seq1  GCGCTCTTCACACACGGTTACAATAACCAGGATCCCTGATTTCCTTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCTTCACACACGGTTACAATAACCAGGATCCCTGATTTCCTTCCCC  500

seq1  CTGAGCCACAGCAAAGCAGAAGGCAAAGGGACGAAAGCAGAGGACTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCACAGCAAAGCAGAAGGCAAAGGGACGAAAGCAGAGGACTCCTA  550

seq1  CTCCAAGTGCACTGACAGCAGTGAGATGGGAACTCAACCCCAGCCGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGTGCACTGACAGCAGTGAGATGGGAACTCAACCCCAGCCGCACA  600

seq1  GGCCTTCTAACGCTTTCTAACCCTAGGTGTGGCACCAGTGAGCTTCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTAACGCTTTCTAACCCTAGGTGTGGCACCAGTGAGCTTCAGCA  650

seq1  AGATGCAATCACCAACGGTCCGTCATCATGATGACGTCCGTGCAACATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAATCACCAACGGTCCGTCATCATGATGACGTCCGTGCAACATGG  700

seq1  AAACAGTAACTTATATAGTCAGCATCTCATATTTTAGAAGGAAA-CCCCA  749
      ||||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  AAACAGTAACTTATATAGTCAGCATCTCATATTATAGAAGGAAACCCCCA  750

seq1  AAACTCCACTAAAGTATTTTTGGCATTTAAAGGTATATGTTTCTATTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCACTAAAGTATTTTTGGCATTTAAAGGTATATGTTTCTATTCCT  800

seq1  AGAAATAGCCCTTCGTCCCCCAGTGAAGTCTAGCAAAGGAGAAGCTGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGCCCTTCGTCCCCCAGTGAAGTCTAGCAAAGGAGAAGCTGCCA  850

seq1  CACCCAGGAGTGCTGATGCGATGGCAGGGTACTA-CTGCCACCTTTCCAT  898
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACCCAGGAGTGCTGATGCGATGGCAGGGTACTACCTGCCACCTTTCCAT  900

seq1  ATTCTTACTTAGCTGAGCCATAGAGCTCCC-AGGCTTTGGCGATCCCCAG  947
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  ATTCTTACTTAGCTGAGCCATAGAGCTCCCAAGGCTTTGGCGAT-CCCAG  949

seq1  GGCCAGTCCCTTGCTGGGGTTATTGGACAGGATCTTGGAAGCTTC-TTTG  996
       | ||||| |||||| ||||||||||||||||||||||||||| | ||||
seq2  AGTCAGTCACTTGCT-GGGTTATTGGACAGGATCTTGGAAGCTACTTTTG  998

seq1  GTCTTATTCAGGACATTGAGAACGTGT-CTG-TTG-GAAAAGAGATGGCT  1043
      |||||||  ||||||||||||   ||| ||| ||| ||||||||||||||
seq2  GTCTTATCAAGGACATTGAGACGATGTACTGATTGAGAAAAGAGATGGCT  1048

seq1  GCTTAG-TAAGTGGATGGACCAGAATACCC-TTCTGCCC-ATG-ACCTCA  1089
      ||| || |||||||||||| ||| |||||| |||||||| ||| ||||||
seq2  GCTAAGTTAAGTGGATGGA-CAG-ATACCCGTTCTGCCCAATGAACCTCA  1096

seq1  CACATACATACAGGAACATTAC--TCTGAAACTCAGCCAAGCACT  1132
      ||||||||||||||| ||||||  ||||||  |||  ||||||||
seq2  CACATACATACAGGACCATTACCTTCTGAACTTCAAGCAAGCACT  1141

seq1: chr2_155594466_155594891
seq2: B6Ng01-299D12.g_70_495 (reverse)

seq1  TCTCCCCTCCCTCTGCTTCTCCCTCTCCTTCTCCTTCTCCTTTCCTCTGT  50
      ||||||||||||  |||| |||||||||||||||||||||||||||||||
seq2  TCTCCCCTCCCTAAGCTTATCCCTCTCCTTCTCCTTCTCCTTTCCTCTGT  50

seq1  GTGTGTGTGTGTGTGTGTGTCTCCCACAATCAATTTGGTTGTTTTAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTCTCCCACAATCAATTTGGTTGTTTTAATTG  100

seq1  GCTCACTGAGGACAGGCCTCTGGGGCATAGGCTGTGACCCTAAGCCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGAGGACAGGCCTCTGGGGCATAGGCTGTGACCCTAAGCCTAGT  150

seq1  AACAGCTGCTTAAGACTGTTTATAGAAAGTTAGACATTCTAATGAATAAA  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACAGCTGCTTAAGACTGTTTATAGAAAGTTAGACATTTTAATGAATAAA  200

seq1  TAAATGAACAAAGGAACAGGGCTGGAGCTTTGGTGTCTGACCCTTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAACAAAGGAACAGGGCTGGAGCTTTGGTGTCTGACCCTTGGATT  250

seq1  CTGCTACTGCTCCTACTCTAGTTCCATCATTGGACAAGTCATTTCCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTGCTCCTACTCTAGTTCCATCATTGGACAAGTCATTTCCCCAT  300

seq1  TGCCTTCTCCTTAGACTCCAACACACAGAGGAGCTGTTCAGTGTAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTCCTTAGACTCCAACACACAGAGGAGCTGTTCAGTGTAGAGTG  350

seq1  ATACAATGTAGATAAATTACCTTCTACATTAAGGTGCAGAGCCCTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGTAGATAAATTACCTTCTACATTAAGGTGCAGAGCCCTCTTTA  400

seq1  GCTTGTAGCTGCTACAACAGGAATTC  426
      ||||||||||||||||||||||||||
seq2  GCTTGTAGCTGCTACAACAGGAATTC  426