BAC Information

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BAC

Clone NameB6Ng01-299N17
Chromosome2 (Build37)
Map Location 34,053,034 - 34,054,207
singlet/doubletsinglet
Overlap genePbx3
Upstream geneRalgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
Downstream geneLOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299N17.bB6Ng01-299N17.g
ACCGA094584GA094585
length1,173246
definitionB6Ng01-299N17.b B6Ng01-299N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcgtataatgtgattgcacatgtgggttgccatgcctggctcc
tattattcttaagtattaaaatatttggttccaggacagccagggctata
catagaaaccctgtctcggaaaaaaaaaaaaaaaaaaacccaaaaaaacc
caaccaaaccaaaccaaaaaaaaaaagtattaaaatatttgaagtaataa
aatttcagttttatatgcatgatcaaaaattatattgttaggataggtgt
ggtgactcaagcctttactcccaacacttcagaggcaagagataggcaga
tctctgtgagtttgaggcgagcctggtctacagtgcaagttccaggacaa
ccaggaatacacagagaaactctcgaaaaacaaacaaacaacagcaacaa
caacaacaaactgtattgttattcttatgtttttagtattttaaggtaga
tttatataatctctgatgtctaaatttaactgtttttcagtataatttct
actttagagcacattgttctcttttcagaacagatgatctgtcagagctg
aaacaaaaattctttgttaaggtctagagacaccttagtgttcagtggtt
aagagcactagttgttcttccagaggaaccaggtttgacgctcatcacct
acatggtctgtctgtaattctagtttctagggaatatgatggcctcttct
ggtcatgcatgtacatgatacacagacatacatgcaggcaaacacccata
taaaatgaaaacatttaaattatttgcttccatttctcatgaacttgaac
taaaaactataacgatagaaattaatgtgtttaaccgaataaccatttca
tccacttcagagatatagaaagagggattttcatgggaggttaatttttt
tagacaggaagtaggtgaattcagaaagctgtcatattttaaatgggata
catgactgctgaaagtcctctgctagatgggacagattaggaagcatgtc
ttaagacagatgagtatctctgttttatatatttctgggtcttcaccctt
tttcttcaaactttcaaaacaaactgtaagaaattagtggtggcagcagg
tgttgagggaagaattgtccatgactcactactagtgaatggaaccggac
attgtacctcacaggttggagtg
acataccttactgatgatatataaatgatttagagagaaagtaggactca
gtagaatgcggagaccagctggaaaatggacttcaaaaaatcaccaattt
gcagttaccatagtgaagatcaagacaggtgagagtccttaagtagtcta
aattgaggaaggattttgattaggagtaggctaggtagtttgaaatcata
ttctcagggttgcttattagtaacaggggttgggtggggtggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_34053034_34054207
seq2: B6Ng01-299N17.b_49_1221

seq1  GAATTCCTCGTATAATGTGATTGCACATGTGGGTTGCCATGCCTGGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGTATAATGTGATTGCACATGTGGGTTGCCATGCCTGGCTCC  50

seq1  TATTATTCTTAAGTATTAAAATATTTGGTTCCAGGACAGCCAGGGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTTAAGTATTAAAATATTTGGTTCCAGGACAGCCAGGGCTATA  100

seq1  CATAGAAACCCTGTCTCGGAAAAAAAAAAAAAAAAAAACCCAAAAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAACCCTGTCTCGGAAAAAAAAAAAAAAAAAAACCCAAAAAAACC  150

seq1  CAACCAAACCAAACCAAAAAAAAAAAGTATTAAAATATTTGAAGTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAACCAAACCAAAAAAAAAAAGTATTAAAATATTTGAAGTAATAA  200

seq1  AATTTCAGTTTTATATGCATGATCAAAAATTATATTGTTAGGATAGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTTTTATATGCATGATCAAAAATTATATTGTTAGGATAGGTGT  250

seq1  GGTGACTCAAGCCTTTACTCCCAACACTTCAGAGGCAAGAGATAGGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCAAGCCTTTACTCCCAACACTTCAGAGGCAAGAGATAGGCAGA  300

seq1  TCTCTGTGAGTTTGAGGCGAGCCTGGTCTACAGTGCAAGTTCCAGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGAGTTTGAGGCGAGCCTGGTCTACAGTGCAAGTTCCAGGACAA  350

seq1  CCAGGAATACACAGAGAAACTCTCGAAAAACAAACAAACAACAGCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATACACAGAGAAACTCTCGAAAAACAAACAAACAACAGCAACAA  400

seq1  CAACAACAAACTGTATTGTTATTCTTATGTTTTTAGTATTTTAAGGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAACTGTATTGTTATTCTTATGTTTTTAGTATTTTAAGGTAGA  450

seq1  TTTATATAATCTCTGATGTCTAAATTTAACTGTTTTTCAGTATAATTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAATCTCTGATGTCTAAATTTAACTGTTTTTCAGTATAATTTCT  500

seq1  ACTTTAGAGCACATTGTTCTCTTTTCAGAACAGATGATCTGTCAGAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGAGCACATTGTTCTCTTTTCAGAACAGATGATCTGTCAGAGCTG  550

seq1  AAACAAAAATTCTTTGTTAAGGTCTAGAGACACCTTAGTGTTCAGTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATTCTTTGTTAAGGTCTAGAGACACCTTAGTGTTCAGTGGTT  600

seq1  AAGAGCACTAGTTGTTCTTCCAGAGGAACCAGGTTTGACGCTCATCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTAGTTGTTCTTCCAGAGGAACCAGGTTTGACGCTCATCACCT  650

seq1  ACATGGTCTGTCTGTAATTCTAGTTTCTAGGGAATATGATGGCCTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTCTGTCTGTAATTCTAGTTTCTAGGGAATATGATGGCCTCTTCT  700

seq1  GGTCATGCATGTACATGATACACAGACATACATGCAGGCAAACACCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGCATGTACATGATACACAGACATACATGCAGGCAAACACCCATA  750

seq1  TAAAATGAAAACATTTAAATTATTTGCTTCCATTTCTCATGAACTTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAAAACATTTAAATTATTTGCTTCCATTTCTCATGAACTTGAAC  800

seq1  TAAAAACTATAACGATAGAAATTAATGTGTTTAACCGAATAACCATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTATAACGATAGAAATTAATGTGTTTAACCGAATAACCATTTCA  850

seq1  TCCACTTCAGAGATATAGAAAGAGGGATTTTCATGGGAGGTTAA-TTTTT  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCACTTCAGAGATATAGAAAGAGGGATTTTCATGGGAGGTTAATTTTTT  900

seq1  TAGACAGGAAGTAGGTGAATTCAGAAAGCTGTCATAATTTAAAT-GGATA  948
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TAGACAGGAAGTAGGTGAATTCAGAAAGCTGTCATATTTTAAATGGGATA  950

seq1  CATGACTGCTGAAAGT-CTCTGCTAGATGGGACAAGATTAGGAAGCATGT  997
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  CATGACTGCTGAAAGTCCTCTGCTAGATGGGAC-AGATTAGGAAGCATGT  999

seq1  CTTAAGACAGATGAGTATCTCTGTCTATAT-TATTTCTGGGTCTTCACCC  1046
      |||||||||||||||||||||||| | ||| |||||||||||||||||||
seq2  CTTAAGACAGATGAGTATCTCTGT-TTTATATATTTCTGGGTCTTCACCC  1048

seq1  -TTTTCTCAAAACTTTCAAAACAAACTGTAGAAAATAAGTGGT-GCAGCC  1094
       ||||||  |||||||||||||||||||||  |||| |||||| |||| |
seq2  TTTTTCTTCAAACTTTCAAAACAAACTGTAAGAAATTAGTGGTGGCAG-C  1097

seq1  AGGTG-TGAGGG-AGAA-TGTCCATAGACCCAACTACTAGGTAGATGGAA  1141
      ||||| |||||| |||| ||||||| ||| | ||||||| ||  ||||||
seq2  AGGTGTTGAGGGAAGAATTGTCCAT-GACTC-ACTACTA-GTGAATGGAA  1144

seq1  ACACGGGGACCATTGTACC-CACAGGTTTGAGTG  1174
       |    ||| ||||||||| |||||||| |||||
seq2  CC----GGA-CATTGTACCTCACAGGTTGGAGTG  1173