BAC Information

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BAC

Clone NameB6Ng01-299N19
Chromosome2 (Build37)
Map Location 14,953,149 - 14,954,226
singlet/doubletsinglet
Overlap geneNsun6
Upstream genePtpla, Stam, 2010003H20Rik, Mrc1, Slc39a12, Cacnb2, LOC100041164, LOC625335, LOC625342, LOC100041220
Downstream geneArl5b, LOC633061, LOC667329, LOC227588, LOC625457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299N19.bB6Ng01-299N19.g
ACCGA094588GA094589
length1,1161,146
definitionB6Ng01-299N19.b B6Ng01-299N19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttccccttctcctggttccttatgagataccaagcctctgctg
ttatttgtattgtagcattacattttaaaggatttaaagctaacagctac
acataagagaaaacatacaatatttgtattttggggtctaaggttacctc
atctaggatgatttttttctaactttattcatttattagatgaccatcta
ggcggtttccaatttctggctattatgaataaaacagcaattaacaggaa
tgaacaaacatctctgtagtatgatgtagagtcctttggttgcatgccca
agagtagaatagctggatcttgtggtatactgattttcagcgtgttaagg
aaccctcatactgatttccataggttgtgtgcctgtttgcacttcacact
agcagtgaataagtggtttcccttttccacagccttgccagctgtcatgt
gttttattgatcttgggcattctgacttgagttagataaaatctcaaaat
agctttaatctacatttctctgatggctaggaaaaaacactaatagggca
gcaggagagagccaggccactggtgtttgcactgagactctgaatcccag
ggagtagagaagatgtggaaggaggagctcctgtaggcaggctgcatgca
gcaagactgagtctggagagatctgagtggaggacaggaagaacaatgaa
aatcacctaccttcgtctcagccctgtgtggcctttggggtttcatagct
ctcagtttcttagaatgttgtttgacctagaagaacctgagtaggttggt
tgaatgtaggtaacaataatttccttaaggagtttcaaaaagaaaaaaaa
atggtcaaaagagtaagttttgcttaaaatttttaaaatttatatatcca
taaatttttagaaggacatttgctgctatggccctgtgtgaaagtcaaag
gacactcctgtgggacttgcagattgactctgattatcaggtttggtgcc
aggcaccttcatctgctgagcccatctcagtggtccacatttaagttgta
gaatttgaaaaaatatcattttccatcattaattgtttgattcctaccat
atgtacttagattgtc
gaattcaacacccgactctcatcaatggacagatcctagaagcagacact
aaacaggaacacagtaaaactaacagaagttatgaaacaaatggatttaa
cagatatctacagaacactttatccaaaaacaaaaggatataccttcttc
tcagcacctcatggtaccttctccaaaaatgaccatataattggtcacaa
aacatgcctcaacagatataaaaatattgaaattatcccatgcatcctat
cagatcaccacagactaaggctgatcttcaataacaacataaataataga
aagccaacattcacgtggaagctgaacaacaatctactcaatgataacct
ggtcaagggtgaaataaagaaagaaattaaagactttttctaatttaatg
aaaatgaagccacaacatacccaaacttatgggacacaatgaaagcagtc
ctaagaggaaaacccatagctctgagtgccaccaaaaagaaactggagag
agcaaacctgagcagcttgacagcacatctgaaagctctagaacaaaagg
aagcaaattcacccaagatgagtagatggcaggaaatcatcaaactcagg
gctgaaatcaaccaagtggaaacaagaaaaactattcaaagaatcaacaa
aactaggagctgattctttgagaaaatcaacaaaatagataaacccttag
ccagactaactataaggcacagggacagcaacctaattaataaaatcaga
agcaaaaagggagacataacaacagaatctgaggaaatccaaaacatcat
cagatcctactaaaacagcctatactcaacaaaactggagaacctgggat
gaaatggacaattatctagacagataccatgtaccaatttaaatcagatc
agattaacgatctaacagtcctatatcccctaaagaaatagaagcagtca
ttaatagtctactgaaccagaaaagcccaggaccaaattgggtttagtgc
agagttctatcagaccttcaagagatctatcatttctcacaaactatcac
aaaatagaagcagaagttaccttagcgatcttctatgaggccacaagtac
atgatcctacaccaggaccgaaaggaaggaaaacttcagaagtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_14953149_14954226
seq2: B6Ng01-299N19.b_85_1163 (reverse)

seq1  GACAATCT-AGTACATAT-GTAAGAATTCAACAA-TAATGATGG-AAATG  46
      |||||||| ||||||||| ||| ||||  ||||| ||||||||| |||||
seq2  GACAATCTAAGTACATATGGTAGGAATCAAACAATTAATGATGGAAAATG  50

seq1  ATTATTTTTTCAAATTCTACAACTTAAATGTGGGCCACTGAGAT-GGCTC  95
      | ||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  A-TATTTTTTCAAATTCTACAACTTAAATGTGGACCACTGAGATGGGCTC  99

seq1  AGCAGATGAAGGTGCCTGCCACCAAACCTGATAATCAGAGTTCAATCTGC  145
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  AGCAGATGAAGGTGCCTGGCACCAAACCTGATAATCAGAG-TCAATCTGC  148

seq1  AAGTCCCACAGGAGTTGTCCTTTGACTTTCACACAGGGCCATAGCAGCAA  195
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGTCCCACAGGAG-TGTCCTTTGACTTTCACACAGGGCCATAGCAGCAA  197

seq1  ATGTCCCTTCTAAAAA-TTATGGATATATAAATTTTAAAAATTTTAAGCA  244
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGT-CCTTCTAAAAATTTATGGATATATAAATTTTAAAAATTTTAAGCA  246

seq1  AAACTTACTCTTTTGACCATTTTTTTTTCTTTTTTGAAACTCCTTAAGGA  294
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAACTTACTCTTTTGACCATTTTTTTTTC-TTTTTGAAACTCCTTAAGGA  295

seq1  AATTATTGTTACCTACATTCAACCAACCTACTCAGGTTCTTCTAGGTCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTTACCTACATTCAACCAACCTACTCAGGTTCTTCTAGGTCAA  345

seq1  ACAACATTCTAAGAAACTGAGAGCTATGAAACCCCAAAGGCCACACAGGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTCTAAGAAACTGAGAGCTATGAAACCCCAAAGGCCACACAGGG  395

seq1  CTGAGACGAAGGTAGGTGATTTTCATTGTTCTTCCTGTCCTCCACTCAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACGAAGGTAGGTGATTTTCATTGTTCTTCCTGTCCTCCACTCAGA  445

seq1  TCTCTCCAGACTCAGTCTTGCTGCATGCAGCCTGCCTACAGGAGCTCCTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGACTCAGTCTTGCTGCATGCAGCCTGCCTACAGGAGCTCCTC  495

seq1  CTTCCACATCTTCTCTACTCCCTGGGATTCAGAGTCTCAGTGCAAACACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACATCTTCTCTACTCCCTGGGATTCAGAGTCTCAGTGCAAACACC  545

seq1  AGTGGCCTGGCTCTCTCCTGCTGCCCTATTAGTGTTTTTTCCTAGCCATC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTGGCTCTCTCCTGCTGCCCTATTAGTGTTTTTTCCTAGCCATC  595

seq1  AGAGAAATGTAGATTAAAGCTATTTTGAGATTTTATCTAACTCAAGTCAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGTAGATTAAAGCTATTTTGAGATTTTATCTAACTCAAGTCAG  645

seq1  AATGCCCAAGATCAATAAAACACATGACAGCTGGCAAGGCTGTGGAAAAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCAAGATCAATAAAACACATGACAGCTGGCAAGGCTGTGGAAAAG  695

seq1  GGAAACCACTTATTCACTGCTAGTGTGAAGTGCAAACAGGCACACAACCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCACTTATTCACTGCTAGTGTGAAGTGCAAACAGGCACACAACCT  745

seq1  ATGGAAATCAGTATGAGGGTTCCTTAACACGCTGAAAATCAGTATACCAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATCAGTATGAGGGTTCCTTAACACGCTGAAAATCAGTATACCAC  795

seq1  AAGATCCAGCTATTCTACTCTTGGGCATGCAACCAAAGGACTCTACATCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAGCTATTCTACTCTTGGGCATGCAACCAAAGGACTCTACATCA  845

seq1  TACTACAGAGATGTTTGTTCATTCCTGTTAATTGCTGTTTTATTCATAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGAGATGTTTGTTCATTCCTGTTAATTGCTGTTTTATTCATAAT  895

seq1  AGCCAGAAATTGGAAACCGCCTAGATGGTCATCTAATAAATGAATAAAGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAATTGGAAACCGCCTAGATGGTCATCTAATAAATGAATAAAGT  945

seq1  TAGAAAAAAATCATCCTAGATGAGGTAACCTTAGACCCCAAAATACAAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAAATCATCCTAGATGAGGTAACCTTAGACCCCAAAATACAAAT  995

seq1  ATTGTATGTTTTCTCTTATGTGTAGCTGTTAGCTTTAAATCCTTTAAAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTTTTCTCTTATGTGTAGCTGTTAGCTTTAAATCCTTTAAAAT  1045

seq1  GTAATGCTACAATACAAATAACAGCAGAGGCTTG  1078
      ||||||||||||||||||||||||||||||||||
seq2  GTAATGCTACAATACAAATAACAGCAGAGGCTTG  1079