BAC Information

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BAC

Clone NameB6Ng01-300B24
Chromosome2 (Build37)
Map Location 21,126,786 - 21,127,917
singlet/doubletsinglet
Overlap gene4933434I06Rik, Thnsl1
Upstream geneLOC667609, Etl4, Arhgap21, LOC433408, LOC675912, C130046B21Rik
Downstream geneGpr158, LOC637235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300B24.bB6Ng01-300B24.g
ACCGA094781GA094782
length1,1891,126
definitionB6Ng01-300B24.b B6Ng01-300B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgcaaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacaccaagatattttatattat
ttgtgactattgagaagggtgttgtttcctaattctttctcagcctgttt
attctttgtatagagaaggcattgacttgttgagtttattttatatcagc
tacttcacgaagctgtttatcagtttaggagtttctctgggtaagaattt
ttagttcacttatttatactattccattcatctgcaaagtgcaattttgg
aacttccgtcatttaccaatgttgaatctcccttgagac

gaattccttaacaagtactcagctttttggctcactttcccactgtctca
actccttctctcaccgcctttttcttttcttactttcttatcaaagaact
aaaatttctctttcgtgtaatttccctttgaccctttcgtaacagtccct
ttttcaggaagaaaataattctgctccgagtctgtttagcgttgttgacc
acgtggttgctaaggaaacagttgctaggagacggggcaacctggctttt
atctgattccttttttgtaacctcttctgtctgagaaaaacgtaaggaaa
aagacgttcctgcgtctttggaaaagacgacatgaaaacattgtcccccc
cccccgcacccaaacattttgtggttttcctcggtacatctggaaagaaa
aattctacaatagggagcaggacagacacgcacgcgtcacataatagttt
ccaacattcaggccgcgcccctgcggaggtggagcgatcgacggggaagg
ggaggagcctcggggtaatgggcggggcgtctgggttacgtggttggcct
agtggcgcagcgcgcagtcagcgcaggcgcagaagcagcagcttggggcg
ggcttgccggctgaggttgccaggcggtgccgaaggcgcttccctttctc
cctttctctctttcctcttctttgggtggttttcttggtgagttaatgga
ggaggaatggaaagccagcgagagttgttaccctagcatccccccttccg
tcgtgccccatcaggcctctctttgccatccacctgtcgcaccggaccct
gcggcgggccctgcggtgctctgtctccacggtgcgtgcgcgagcgctac
ccggcgccaggaggaccagcctttggaagagggcctcgaattttgcccag
gtttcagcccttgactccctttttgacatgttttttgttttttcctctcc
gagaagtgcttatatttcgtttgagctgtttgatctcccggttcatgcat
atgcacttgtgatgcacttctcattgaaagcttcaccagtcacatccttg
gccttgggattgggaggaaatttcgtggggtctaattccaacttgccagt
ggcctgcaggaagtcaggtcatcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21126786_21127917
seq2: B6Ng01-300B24.g_64_1189

seq1  GAATTCCTTAACAAGTACTCAGCTTTTTGGCTCACTTTCCCACTGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAACAAGTACTCAGCTTTTTGGCTCACTTTCCCACTGTCTCA  50

seq1  ACTCCTTCTCTCACCGCCTTTTTCTTTTCTTACTTTCTTATCAAAGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTCTCTCACCGCCTTTTTCTTTTCTTACTTTCTTATCAAAGAACT  100

seq1  AAAATTTCTCTTTCGTGTAATTTCCCTTTGACCCTTTCGTAACAGTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCTCTTTCGTGTAATTTCCCTTTGACCCTTTCGTAACAGTCCCT  150

seq1  TTTTCAGGAAGAAAATAATTCTGCTCCGAGTCTGTTTAGCGTTGTTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGAAGAAAATAATTCTGCTCCGAGTCTGTTTAGCGTTGTTGACC  200

seq1  ACGTGGTTGCTAAGGAAACAGTTGCTAGGAGACGGGGCAACCTGGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGTTGCTAAGGAAACAGTTGCTAGGAGACGGGGCAACCTGGCTTTT  250

seq1  ATCTGATTCCTTTTTTGTAACCTCTTCTGTCTGAGAAAAACGTAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTCCTTTTTTGTAACCTCTTCTGTCTGAGAAAAACGTAAGGAAA  300

seq1  AAGACGTTCCTGCGTCTTTGGAAAAGACGACATGAAAACATTGTCCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTTCCTGCGTCTTTGGAAAAGACGACATGAAAACATTGTCCCCCC  350

seq1  CCCCCGCACCCAAACATTTTGTGGTTTTCCTCGGTACATCTGGAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCACCCAAACATTTTGTGGTTTTCCTCGGTACATCTGGAAAGAAA  400

seq1  AATTCTACAATAGGGAGCAGGACAGACACGCACGCGTCACATAATAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTACAATAGGGAGCAGGACAGACACGCACGCGTCACATAATAGTTT  450

seq1  CCAACATTCAGGCCGCGCCCCTGCGGAGGTGGAGCGATCGACGGGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTCAGGCCGCGCCCCTGCGGAGGTGGAGCGATCGACGGGGAAGG  500

seq1  GGAGGAGCCTCGGGGTAATGGGCGGGGCGTCTGGGTTACGTGGTTGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCCTCGGGGTAATGGGCGGGGCGTCTGGGTTACGTGGTTGGCCT  550

seq1  AGTGGCGCAGCGCGCAGTCAGCGCAGGCGCAGAAGCAGCAGCTTGGGGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCGCAGCGCGCAGTCAGCGCAGGCGCAGAAGCAGCAGCTTGGGGCG  600

seq1  GGCTTGCCGGCTGAGGTTGCCAGGCGGTGCCGAAGGCGCTTCCCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCCGGCTGAGGTTGCCAGGCGGTGCCGAAGGCGCTTCCCTTTCTC  650

seq1  CCTTTCTCTCTTTCCTCTTCTTTGGGTGGTTTTCTTGGTGAGTTAATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCTCTTTCCTCTTCTTTGGGTGGTTTTCTTGGTGAGTTAATGGA  700

seq1  GGAGGAATGGAAAGCCAGCGAGAGTTGTTACCCTAGCATCCCCCCTTCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATGGAAAGCCAGCGAGAGTTGTTACCCTAGCATCCCCCCTTCCG  750

seq1  TCGTGCCCCATCAGGCCTCTCTTTGCCATCCACCTGTCGCACCGGACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCCCCATCAGGCCTCTCTTTGCCATCCACCTGTCGCACCGGACCCT  800

seq1  GCGGCGGGCCCTGCGGTGCTCTGTCTCCACGGTGCGTGCGCGAGCGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCGGGCCCTGCGGTGCTCTGTCTCCACGGTGCGTGCGCGAGCGCTAC  850

seq1  CCGGCGCCAGGAGGACCAGCCTTTGGAAGAGGGCCTCGAATTTTGCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCGCCAGGAGGACCAGCCTTTGGAAGAGGGCCTCGAATTTTGCCCAG  900

seq1  GTTTCAGCCCTTGACTCCCTTTTTGACATGTTTTTGTTTTTTTCCTCTCC  950
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  GTTTCAGCCCTTGACTCCCTTTTTGACATGTTTTTTGTTTTTTCCTCTCC  950

seq1  GAGAAGTGCTTATATTTCGTTTGAGCTGTTTGATCTCCC-GTTCATGCAT  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGAAGTGCTTATATTTCGTTTGAGCTGTTTGATCTCCCGGTTCATGCAT  1000

seq1  ATGCACTTGTGATTGCAC-TCTCATTTGAAAGCCTTCACCCAGTCACATC  1048
      |||||||||||| ||||| ||||| ||||||| ||||| |||||||||||
seq2  ATGCACTTGTGA-TGCACTTCTCA-TTGAAAG-CTTCA-CCAGTCACATC  1046

seq1  CTTTGGCCCTGGGATTTGGGAGGAAATTTCGT-GGGTCTAAATCC-ACTT  1096
      | |||||| ||||| ||||||||||||||||| |||||||| ||| ||||
seq2  C-TTGGCCTTGGGA-TTGGGAGGAAATTTCGTGGGGTCTAATTCCAACTT  1094

seq1  GGCAGTTGCCCTGCCAGGGAAGTCAGGTGCATCAGT  1132
      | ||| || |||||   ||||||||||| |||||||
seq2  GCCAG-TGGCCTGC--AGGAAGTCAGGT-CATCAGT  1126


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