BAC Information

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BAC

Clone NameB6Ng01-300C15
Chromosome2 (Build37)
Map Location 150,718,955 - 150,720,076
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000015750, LOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12
Downstream geneGins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300C15.bB6Ng01-300C15.g
ACCGA094810GA094811
length1,1701,110
definitionB6Ng01-300C15.b B6Ng01-300C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaagcctgagat
ttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaagtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacatatgaaactccag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccagtagagactgccatatccagggatccaccccataatta
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagaacccaaggagctaaagggatctgcaacctat
agtggacacattatgaactaacagtaccccggagctcttgactctagctg
catatgtatcaaaagatgcctagtcgcatcactggaagagagggcattgg
acacacaactttatatgccccagtacaggaacacaggcaaaagggggatt
gtggtgtgtatagggcatat
gaattctctacctgcatcaccagttgcttgcactgaatctggcaaagcac
agtaattgatgaatacactaatttataggtacccgacagtgatgttactt
tcaggcagagctatatggatattccaggactgaaatgggacaggtcaagg
ataaaagggcataatgtatctgctgcacacattttttttttcacgttgac
aaaaaccagccagcaaacatttatttctaataaatgaaatctcacgctcc
cataatacctgaacatgggtcttcatagttctacaggaacaattttaaaa
cactatactggaaacaacccaaatgtccttcagtaggaaaattgtgaaat
aaaatgtggcacatctatgctacagattcaggtcattacagttttttttt
tttaatttattgatcaacacacaacaatttggacagatctcaagggaatt
atgctgactacacaaaagtacagcctctagagacaaaattctaagtaatt
tccctgatatcttatcctttaaatcacttcatcatgaaataaaggagaca
gaccagtggttgccaatggttagggatgcaggagtcatagataggggaga
cgggaaggtaaggctacaaaaggacaactttatagagtgcactctgtgcc
tttattgctaaagtggagacctcagcttgtacatatgactaggctgtata
agagcatacacaggttcatacaagcacacaaatgggtgctgcacacatta
ttaacagtaatggaaatcagccgggcatggtagcgcacacctttaatccc
agcactcgggaggcagaggcaggcagatttctgagttcaaggccagcctg
gtctacagagtgagttccaggatagccagggctacacagagaaaccctgt
ctcaaaaataaaaaacaaacaaacaaacaacaaacaagtactggaaatca
acagcttgatcttttcttagggccccctctttcgtgcatcaaacagctgc
catcactctacattcttacttttcattttatgagtagccatcaactaccc
aaattttgtgtgagattccattccttctcataacactacatcaattacat
tttctcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_150718955_150720076
seq2: B6Ng01-300C15.g_64_1173

seq1  GAATTCTCTACCTGCATCACCAGTTGCTTGCACTGAATCTGGCAAAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACCTGCATCACCAGTTGCTTGCACTGAATCTGGCAAAGCAC  50

seq1  AGTAATTGATGAATACACTAATTTATAGGTACCCGACAGTGATGTTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGATGAATACACTAATTTATAGGTACCCGACAGTGATGTTACTT  100

seq1  TCAGGCAGAGCTATATGGATATTCCAGGACTGAAATGGGACAGGTCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAGAGCTATATGGATATTCCAGGACTGAAATGGGACAGGTCAAGG  150

seq1  ATAAAAGGGCATAATGTATCTGCTGCACACATTTTTTTTTTCACGTTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGGGCATAATGTATCTGCTGCACACATTTTTTTTTTCACGTTGAC  200

seq1  AAAAACCAGCCAGCAAACATTTATTTCTAATAAATGAAATCTCACGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAGCCAGCAAACATTTATTTCTAATAAATGAAATCTCACGCTCC  250

seq1  CATAATACCTGAACATGGGTCTTCATAGTTCTACAGGAACAATTTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATACCTGAACATGGGTCTTCATAGTTCTACAGGAACAATTTTAAAA  300

seq1  CACTATACTGGAAACAACCCAAATGTCCTTCAGTAGGAAAATTGTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATACTGGAAACAACCCAAATGTCCTTCAGTAGGAAAATTGTGAAAT  350

seq1  AAAATGTGGCACATCTATGCTACAGATTCAGGTCATTACAGTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGGCACATCTATGCTACAGATTCAGGTCATTACAGTTTTTTTTT  400

seq1  TTTAATTTATTGATCAACACACAACAATTTGGACAGATCTCAAGGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTATTGATCAACACACAACAATTTGGACAGATCTCAAGGGAATT  450

seq1  ATGCTGACTACACAAAAGTACAGCCTCTAGAGACAAAATTCTAAGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGACTACACAAAAGTACAGCCTCTAGAGACAAAATTCTAAGTAATT  500

seq1  TCCCTGATATCTTATCCTTTAAATCACTTCATCATGAAATAAAGGAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATATCTTATCCTTTAAATCACTTCATCATGAAATAAAGGAGACA  550

seq1  GACCAGTGGTTGCCAATGGTTAGGGATGCAGGAGTCATAGATAGGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTGGTTGCCAATGGTTAGGGATGCAGGAGTCATAGATAGGGGAGA  600

seq1  CGGGAAGGTAAGGCTACAAAAGGACAACTTTATAGAGTGCACTCTGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGGTAAGGCTACAAAAGGACAACTTTATAGAGTGCACTCTGTGCC  650

seq1  TTTATTGCTAAAGTGGAGACCTCAGCTTGTACATATGACTAGGCTGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTAAAGTGGAGACCTCAGCTTGTACATATGACTAGGCTGTATA  700

seq1  AGAGCATACACAGGTTCATACAAGCACACAAATGGGTGCTGCACACATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATACACAGGTTCATACAAGCACACAAATGGGTGCTGCACACATTA  750

seq1  TTAACAGTAATGGAAATCAGCCGGGCATGGTAGCGCACACCTTTAATCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTAATGGAAATCAGCCGGGCATGGTAGCGCACACCTTTAATCCC  800

seq1  AGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTG  850

seq1  GTCTACAGAGTGAGTTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAGAGTGAGTTCCAGGATAGCCAGGGCTACACAGAGAAACCCTGT  900

seq1  CTCAAAAAATAAAAAACAAACAAACAAACAAACAAACAAGTACTGGAAAT  950
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTC-AAAAATAAAAAACAAACAAACAAAC-AACAAACAAGTACTGGAAAT  948

seq1  CAACAGCTTGATCTTTTC-TAGGGCCCCCTCTTTCGTGGCATCAAAACAG  999
      |||||||||||||||||| |||||||||||||||||| ||||| ||||||
seq2  CAACAGCTTGATCTTTTCTTAGGGCCCCCTCTTTCGT-GCATC-AAACAG  996

seq1  CTGCCATCAACTCTACATTCTTACCTTTCCATTTTATGAGTAGCCAATCA  1049
      |||||||| |||||||||||||| |||| |||||||||||||||| ||||
seq2  CTGCCATC-ACTCTACATTCTTA-CTTTTCATTTTATGAGTAGCC-ATCA  1043

seq1  ACATACCCAAATTTTGTGTGGAGATTCCATT-CTTCTCATAACAACTAAC  1098
      || |||||||||||||||| ||||||||||| ||||||||||| ||| ||
seq2  AC-TACCCAAATTTTGTGT-GAGATTCCATTCCTTCTCATAAC-ACT-AC  1089

seq1  ATCAATTAACATTTTTCTTCACTT  1122
      ||||||| |||||||   ||||||
seq2  ATCAATT-ACATTTT--CTCACTT  1110