BAC Information

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BAC

Clone NameB6Ng01-300G12
Chromosome2 (Build37)
Map Location 86,621,703 - 86,622,382
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302
Downstream geneOlfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300G12.bB6Ng01-300G12.g
ACCGA094992GA094993
length1,212680
definitionB6Ng01-300G12.b B6Ng01-300G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatagctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagacctcgaaaagtctgtttatttcctt
ttccccagtgtacagttacccttgtaaaaggccataggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctggccaccccttcattcaaggggttctggatctgcaaactgtctc
aagtctggaaattgattcactggccgagattgctgtttaccacgatctaa
tgtagcctttctttcatttggctgtttaccacgatctaatgtagcctttc
tttcatttgtttgagaatttttctgcttatacagatcaaacaaatatgca
gtaggcttcgtatgtatttctttttctttttctttttttttttttttaaa
tataattatacttttcgtatgtatttcattcctggaaacaccatgattgg
ttagccagtaccaaaggtccaaccgagtcatgccattataaatttcacct
ctcctgtgctgaccattactgggtatgttattataaacattcttttgtct
acgctgtccattataataactagaatcaccttgtctccggcgattcaatg
ctgccacctggcccttgttacctcggaatccaactaaacccagtgaattt
aattcatctaattgagcagaagcatctccaatgctaagatctggcacaag
gaaaagggaaagaacaaaacccttcaaatgtgctggtgcccctctcacca
atttgtgtcttatagagctagtgaaaggcatatcttctggactttcccat
tgtgacaattatgctttacacatattatccactctagcatgcatttccta
gttcttaaatccctcatcaacactagccatgatatcaagcatctcagtca
ttcagtagccatcttgataaacacctcagcaccattcaacaaccttgaac
cgtttttactatggcgagctccggtatttaccctgagaatcctcatcttc
gaaggagaccgt
gaattcagcatctttaaatataatttacttatttggatttaaagtatcct
tcatcaagatggtatgagatttaaatgcatgcacatgagaatgacaatag
aagagagaggatatgggaattaggataagaaatgataacaagagagatga
aagagacgatatactgttaatgttgcccagtgaaatataacaatattagt
tctgctgcagagttaaatttcaattacttgagttcatagagtaggcaatt
ttagtctgtctctgtctctgtctctctctctctctctttctctttctccc
cttatttctttctttgtttttgtttgtttgtttgtttgtttgttcttact
gtttggttgtttctgaatttatattctattcccaaccatatctatctaaa
gtcaaatatctgttgaaagcataaaaatctattccttttccaattgttcc
atgttgtctcctaaaatgtcactatgtactagtcaataaagtagtatgtt
taatattaaattaaattaaaatctggttttggtttgatcaatcccaaaac
aaagcatgtcaaatttaataatttgaagaaaattagttttttacttatac
ataataattattcctagttgatccatgttttgactgcataggaaatatga
tatgtatgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86621703_86622382
seq2: B6Ng01-300G12.g_68_747 (reverse)

seq1  CACACACACACACACACACACACATACATATCATATTTCCTATGCAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACATACATATCATATTTCCTATGCAGTCA  50

seq1  AAACATGGATCAACTAGGAATAATTATTATGTATAAGTAAAAAACTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGATCAACTAGGAATAATTATTATGTATAAGTAAAAAACTAATT  100

seq1  TTCTTCAAATTATTAAATTTGACATGCTTTGTTTTGGGATTGATCAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAATTATTAAATTTGACATGCTTTGTTTTGGGATTGATCAAACC  150

seq1  AAAACCAGATTTTAATTTAATTTAATATTAAACATACTACTTTATTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGATTTTAATTTAATTTAATATTAAACATACTACTTTATTGACT  200

seq1  AGTACATAGTGACATTTTAGGAGACAACATGGAACAATTGGAAAAGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATAGTGACATTTTAGGAGACAACATGGAACAATTGGAAAAGGAAT  250

seq1  AGATTTTTATGCTTTCAACAGATATTTGACTTTAGATAGATATGGTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTATGCTTTCAACAGATATTTGACTTTAGATAGATATGGTTGGG  300

seq1  AATAGAATATAAATTCAGAAACAACCAAACAGTAAGAACAAACAAACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATATAAATTCAGAAACAACCAAACAGTAAGAACAAACAAACAAA  350

seq1  CAAACAAACAAAAACAAAGAAAGAAATAAGGGGAGAAAGAGAAAGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAAAACAAAGAAAGAAATAAGGGGAGAAAGAGAAAGAGAGA  400

seq1  GAGAGAGAGACAGAGACAGAGACAGACTAAAATTGCCTACTCTATGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGACAGAGACAGACTAAAATTGCCTACTCTATGAACT  450

seq1  CAAGTAATTGAAATTTAACTCTGCAGCAGAACTAATATTGTTATATTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAATTGAAATTTAACTCTGCAGCAGAACTAATATTGTTATATTTCA  500

seq1  CTGGGCAACATTAACAGTATATCGTCTCTTTCATCTCTCTTGTTATCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAACATTAACAGTATATCGTCTCTTTCATCTCTCTTGTTATCATT  550

seq1  TCTTATCCTAATTCCCATATCCTCTCTCTTCTATTGTCATTCTCATGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCCTAATTCCCATATCCTCTCTCTTCTATTGTCATTCTCATGTGC  600

seq1  ATGCATTTAAATCTCATACCATCTTGATGAAGGATACTTTAAATCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTAAATCTCATACCATCTTGATGAAGGATACTTTAAATCCAAAT  650

seq1  AAGTAAATTATATTTAAAGATGCTGAATTC  680
      ||||||||||||||||||||||||||||||
seq2  AAGTAAATTATATTTAAAGATGCTGAATTC  680