BAC Information

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BAC

Clone NameB6Ng01-302C01
Chromosome2 (Build37)
Map Location 83,044,725 - 83,045,840
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
Downstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302C01.bB6Ng01-302C01.g
ACCGA096260GA096261
length3511,114
definitionB6Ng01-302C01.b B6Ng01-302C01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctcatctttctaagacttttatcctgaagagatgttggattttgtcaaat
gatttctcagtgtctaatgaaatgatcatgtgggttttttctttgagttt
gtttatataatagattacgttgatggatttccatatattaaaccatccct
gcatccctgggatgaagcctacttgatcatgatggatgatcattttgatg
tgttattgcatttggtttgtgagattttttttgagtataattgcatgtat
tcgtaagagaaaatgatctgaaattctctttctttgttgggtcattgtgt
ggttttttaatcagaataatggtatcgagaatatttagcagaaacacggt
t
gaattccagtatcagaagaaaactctatgccatcatggtgtggagcatgg
tggtaggaaggcagccaaggcactgaagaaatatctgagagcttacgttc
ctgtatgaaagtaggaggcagagtacaactaacgtaaatggtgagagatt
ttgaaatctcatgcctgtcctgagtaacacacctctctaacaaggctttc
caaccctttccaaacagttccaccaatcagagagcaagaattcaaatgta
tgagaccatgggggtcatttttactcaaaagaccatagagatggagggta
cagctgcttatcaagactaggaggttgagaaacccattcaaaacaggccc
attctaaaaagtacgctcatctttgcttaagatataacagcagtcctaat
aaaagactcaagcagagtaaagaacaatccagcttctccttcccaagaga
atttatgccaatgtaagccctaactggagaccagagaacagatatcagga
cagtatcagcttcttaaggcaaaagcaaactttggaactgctagggaaag
atgcttagctcaactgttgtcatctatttcctttgtttttcaatacattc
tatgacctgtgcatttctgtggtggtttgaatatacttggcccatagaga
atgatattgttaggaggtgtgtcttcttggaggaagtgagtcactgtggg
ggtaggcattggaggtctcctcctatgctccactcattgtggaagagaac
ttccttctagctgcctgaagataccaagctctcctgattgcctttaaata
aagccacagaattctcatctccttctccagcattatgtatgcctgcatat
taccatactttcctactatgaagataatggactaatttctgagctctttg
aattgaccttgaactcacatatctgcaagcctttgtctactgaatgctgg
gattcaaagcatgtaataccaggcctggatttaagcttctctctactgga
tttacactgtaccaggctgctctgatgaagagttttgctttgccttctgt
tctctgagatatgcatgttgccaccaggccttggaacttaacttagcttg
atggaatcctaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83044725_83045840
seq2: B6Ng01-302C01.g_68_1181

seq1  GAATTCCAGTATCAGAAGAAAACTCTATGCCATCATGGTGTGGAGCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTATCAGAAGAAAACTCTATGCCATCATGGTGTGGAGCATGG  50

seq1  TGGTAGGAAGGCAGCCAAGGCACTGAAGAAATATCTGAGAGCTTACGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGAAGGCAGCCAAGGCACTGAAGAAATATCTGAGAGCTTACGTTC  100

seq1  CTGTATGAAAGTAGGAGGCAGAGTACAACTAACGTAAATGGTGAGAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAAAGTAGGAGGCAGAGTACAACTAACGTAAATGGTGAGAGATT  150

seq1  TTGAAATCTCATGCCTGTCCTGAGTAACACACCTCTCTAACAAGGCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCTCATGCCTGTCCTGAGTAACACACCTCTCTAACAAGGCTTTC  200

seq1  CAACCCTTTCCAAACAGTTCCACCAATCAGAGAGCAAGAATTCAAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTTTCCAAACAGTTCCACCAATCAGAGAGCAAGAATTCAAATGTA  250

seq1  TGAGACCATGGGGGTCATTTTTACTCAAAAGACCATAGAGATGGAGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCATGGGGGTCATTTTTACTCAAAAGACCATAGAGATGGAGGGTA  300

seq1  CAGCTGCTTATCAAGACTAGGAGGTTGAGAAACCCATTCAAAACAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTTATCAAGACTAGGAGGTTGAGAAACCCATTCAAAACAGGCCC  350

seq1  ATTCTAAAAAGTACGCTCATCTTTGCTTAAGATATAACAGCAGTCCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAAAAGTACGCTCATCTTTGCTTAAGATATAACAGCAGTCCTAAT  400

seq1  AAAAGACTCAAGCAGAGTAAAGAACAATCCAGCTTCTCCTTCCCAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTCAAGCAGAGTAAAGAACAATCCAGCTTCTCCTTCCCAAGAGA  450

seq1  ATTTATGCCAATGTAAGCCCTAACTGGAGACCAGAGAACAGATATCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCCAATGTAAGCCCTAACTGGAGACCAGAGAACAGATATCAGGA  500

seq1  CAGTATCAGCTTCTTAAGGCAAAAGCAAACTTTGGAACTGCTAGGGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCAGCTTCTTAAGGCAAAAGCAAACTTTGGAACTGCTAGGGAAAG  550

seq1  ATGCTTAGCTCAACTGTTGTCATCTATTTCCTTTGTTTTTCAATACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGCTCAACTGTTGTCATCTATTTCCTTTGTTTTTCAATACATTC  600

seq1  TATGACCTGTGCATTTCTGTGGTGGTTTGAATATACTTGGCCCATAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCTGTGCATTTCTGTGGTGGTTTGAATATACTTGGCCCATAGAGA  650

seq1  ATGATATTGTTAGGAGGTGTGTCTTCTTGGAGGAAGTGAGTCACTGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTGTTAGGAGGTGTGTCTTCTTGGAGGAAGTGAGTCACTGTGGG  700

seq1  GGTAGGCATTGGAGGTCTCCTCCTATGCTCCACTCATTGTGGAAGAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCATTGGAGGTCTCCTCCTATGCTCCACTCATTGTGGAAGAGAAC  750

seq1  TTCCTTCTAGCTGCCTGAAGATACCAAGCTCTCCTGATTGCCTTTAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTAGCTGCCTGAAGATACCAAGCTCTCCTGATTGCCTTTAAATA  800

seq1  AAGCCACAGAATTCTCATCTCCTTCTCCAGCATTATGTATGCCTGCATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGAATTCTCATCTCCTTCTCCAGCATTATGTATGCCTGCATAT  850

seq1  TACCATAC-TTCCTACTATGAAGATAATGGACTAAATTTCTGAGCTCTTT  899
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  TACCATACTTTCCTACTATGAAGATAATGGACT-AATTTCTGAGCTCTTT  899

seq1  GAATTGACCTTGAACTCACATATCTGCAAGCCTTTGTCTACTGAATGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGACCTTGAACTCACATATCTGCAAGCCTTTGTCTACTGAATGCTG  949

seq1  GGATTCAAAGCATGTAATACCAGGCCTGGATTTAAGCTTCTCTCTACTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGATTCAAAGCATGTAATACCAGGCCTGGATTTAAGCTTCTCTCTAC-TG  998

seq1  GATTTACACTGTACCAGGCTGCTCTGAATTGAAGAGTTTTGC-TTGCC-T  1047
      |||||||||||||||||||||||||||  ||||||||||||| ||||| |
seq2  GATTTACACTGTACCAGGCTGCTCTGA--TGAAGAGTTTTGCTTTGCCTT  1046

seq1  CTGTCTCCTGAGATTAATGGCATG-TGCCACCAAG-CTTGGACCTAAACT  1095
      ||||   |||||||  || ||||| |||||||| | |||||| || ||||
seq2  CTGTTCTCTGAGAT--AT-GCATGTTGCCACCAGGCCTTGGAACTTAACT  1093

seq1  TAGCTAGATGGAATCTTACCC  1116
      ||||| ||||||||| |||||
seq2  TAGCTTGATGGAATCCTACCC  1114