BAC Information

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BAC

Clone NameB6Ng01-302F16
Chromosome2 (Build37)
Map Location 123,890,440 - 123,891,496
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream gene4930517E11Rik, LOC100043360, Sema6d, LOC100043367, LOC100043369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302F16.bB6Ng01-302F16.g
ACCGA096423GA096424
length7241,053
definitionB6Ng01-302F16.b B6Ng01-302F16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagaggacactcaaatggctgagaaacattaaagaactgttc
ggcatccttagtcatcagggaaatgctaatcacaactacagtgagatttc
gtcttacacctgtcagaatgactaagatcaataaaacaaatgacagctca
tgctggcgaggatgtgaaataagagtaacattcatccactgcttgtggga
gtgtaaattcatacagctttctggacatcagtgtggtggatcctcaggaa
gatgggaatcttctagttcaagatccagctacagctctctttggcatgta
tccaaaggatgcttcatcctaccacagggacatttgctcttcgatggtct
tttcataatatccagaaattggaaataactttgatgtccgtcaacacatg
aatggataaaggaaatgcgacacatttaaacagtggagcatcacccagtg
attgaaaaaaaaatgaaatcatgaaattcctaggtaaatggatgtaagaa
aaagaatcatccaaagtgaagtacttcacacacagaaagacaaacatggt
atgtattcacttaaaggtggattttaagctgttaagtcaacgataaccaa
tctataaaaccataatggttaagtataaagtaagagactgcaaggtggaa
aaaaggggaagaaatagatatccctagaaagggaaatagaatagatagtt
ataggtagatgagagggttgggga

gaattcacccagggctccgctggggaaagagtggacctcacatcaagccc
aacaggctaggatgagactttcacactcacctatctgaaaggactgtcaa
aatgcaattaccttattagattaggaaattaaaatacatgcctaaataga
ttgttttattttatttgaacattaaatttaatcaggacataatcatttaa
ttgctgttttattatacaggtaagtgatatctattaaatcatccctctta
aatgccatccatgcctgcatacttctaagaaagaagacctcaggctcagc
atgtaagagcactgactattcttgcagagtggttgggttctcagcatcca
tgtgatggctcacagttgtctgtaactccagtttcaggggagcccatgcc
ctcttctgacctccttttgtactgactgcaagcatatgccacatatactt
gcactaggcacatgcacatacaataaaataataaaaacgaaaaaaaattg
ttaatgctctcaatgagaaaaaaatactggaaataaacatatatcgagct
acacaaaatgtcagtcccaaatttataaaccatattaaaatggagttaac
aattcttattgatacttaaagtctgaattttctcttctgactttgaaaga
aacctgtgctaagtacaatacacaaaggtaggaaattggggggagtttta
ctgctcatcaagggagaagaaatcattgctaaaattccaaatgtcacatt
ctggcatgttaagatacggttatttattactgtagtttgaatatgaaatg
tctccaacagaatcctgaggtctgtgacccccagctgctgacaccagttt
tgggagtgctggaaactgtaggaggctttgcatcgctgaacccaagtagg
cagcagagacctgcttagggacagtattttgccttggaaaattgttttcc
agcctttcactttgaggtagtgtctgtcttttttcctgagatgggttcct
gtagcatctcagaaagtgggtctgttggtgtagcgagtctgttagtctat
gtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_123890440_123891496
seq2: B6Ng01-302F16.g_66_1118

seq1  GAATTCACCCAGGGCTCCGCTGGGGAAAGAGTGGACCTCACATCAAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCAGGGCTCCGCTGGGGAAAGAGTGGACCTCACATCAAGCCC  50

seq1  AACAGGCTAGGATGAGACTTTCACACTCACCTATCTGAAAGGACTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTAGGATGAGACTTTCACACTCACCTATCTGAAAGGACTGTCAA  100

seq1  AATGCAATTACCTTATTAGATTAGGAAATTAAAATACATGCCTAAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAATTACCTTATTAGATTAGGAAATTAAAATACATGCCTAAATAGA  150

seq1  TTGTTTTATTTTATTTGAACATTAAATTTAATCAGGACATAATCATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATTTTATTTGAACATTAAATTTAATCAGGACATAATCATTTAA  200

seq1  TTGCTGTTTTATTATACAGGTAAGTGATATCTATTAAATCATCCCTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTTATTATACAGGTAAGTGATATCTATTAAATCATCCCTCTTA  250

seq1  AATGCCATCCATGCCTGCATACTTCTAAGAAAGAAGACCTCAGGCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATCCATGCCTGCATACTTCTAAGAAAGAAGACCTCAGGCTCAGC  300

seq1  ATGTAAGAGCACTGACTATTCTTGCAGAGTGGTTGGGTTCTCAGCATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGAGCACTGACTATTCTTGCAGAGTGGTTGGGTTCTCAGCATCCA  350

seq1  TGTGATGGCTCACAGTTGTCTGTAACTCCAGTTTCAGGGGAGCCCATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGGCTCACAGTTGTCTGTAACTCCAGTTTCAGGGGAGCCCATGCC  400

seq1  CTCTTCTGACCTCCTTTTGTACTGACTGCAAGCATATGCCACATATACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGACCTCCTTTTGTACTGACTGCAAGCATATGCCACATATACTT  450

seq1  GCACTAGGCACATGCACATACAATAAAATAATAAAAACGAAAAAAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGCACATGCACATACAATAAAATAATAAAAACGAAAAAAAATTG  500

seq1  TTAATGCTCTCAATGAGAAAAAAATACTGGAAATAAACATATATCGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTCTCAATGAGAAAAAAATACTGGAAATAAACATATATCGAGCT  550

seq1  ACACAAAATGTCAGTCCCAAATTTATAAACCATATTAAAATGGAGTTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAATGTCAGTCCCAAATTTATAAACCATATTAAAATGGAGTTAAC  600

seq1  AATTCTTATTGATACTTAAAGTCTGAATTTTCTCTTCTGACTTTGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTATTGATACTTAAAGTCTGAATTTTCTCTTCTGACTTTGAAAGA  650

seq1  AACCTGTGCTAAGTACAATACACAAAGGTAGGAAATTGGGGGGAGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGCTAAGTACAATACACAAAGGTAGGAAATTGGGGGGAGTTTTA  700

seq1  CTGCTCATCAAGGGAGAAGAAATCATTGCTAAAATTCCAAATGTCACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATCAAGGGAGAAGAAATCATTGCTAAAATTCCAAATGTCACATT  750

seq1  CTGGCATGTTAAGATACGGTTATTTATTACTGTAGTTTGAATATGAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATGTTAAGATACGGTTATTTATTACTGTAGTTTGAATATGAAATG  800

seq1  TCTCCAACAGAATCCTGAGGTCTGTGACCCCCAGCTGCTGACACCAGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAACAGAATCCTGAGGTCTGTGACCCCCAGCTGCTGACACCAGTTT  850

seq1  TGGGAGTGCTGGAAACTGTAGGAGGCTTTGCATCGCTGAA-CCAAGTAGG  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGGGAGTGCTGGAAACTGTAGGAGGCTTTGCATCGCTGAACCCAAGTAGG  900

seq1  CAGCAGGAGACCTGCTTAGGGACAGTATTTTGCCTTGGAAAATTGTTTTC  949
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCA-GAGACCTGCTTAGGGACAGTATTTTGCCTTGGAAAATTGTTTTC  949

seq1  CAGCCTTTCACTTTGAGGTAGTGTCTGTCTTTTTCCCTGAGATGGGTTTC  999
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CAGCCTTTCACTTTGAGGTAGTGTCTGTCTTTTTTCCTGAGATGGG-TTC  998

seq1  CTGTAAGCATCTCAGAAAGTTGGGTCCTGTTTGTGTAGCGAGTCTGTTAG  1049
      |||| |||||||||||||| ||||| ||||| ||||||||||||||||||
seq2  CTGT-AGCATCTCAGAAAG-TGGGT-CTGTTGGTGTAGCGAGTCTGTTAG  1045

seq1  TCTATGTC  1057
      ||||||||
seq2  TCTATGTC  1053


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