BAC Information

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BAC

Clone NameB6Ng01-302I12
Chromosome2 (Build37)
Map Location 22,594,135 - 22,594,889
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr158, LOC637235, Myo3a, LOC100041703, Myo3a, Gad2
Downstream geneApbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1, 4931423N10Rik, LOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302I12.bB6Ng01-302I12.g
ACCGA096555GA096556
length245915
definitionB6Ng01-302I12.b B6Ng01-302I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctgaactcactgtcctttcaggtccacatttgctctggctctggcaact
gactgaaccaaacaattaggctcatacctagaactttggaaatggtaatg
gagttgataacacaccctaacagaaagaggaaggctccactcactagtac
actttcactagaagcctcaccctgtcagcagtttaggaatttgtaaagcc
aatctggacaatatttaaatggtttggaatttctacttcatgttt
gaattcctcgttcatggggaataattgcaatccccgatccccatcacgaa
tggggttcaacgggttacccgcgcctgccggcgtagggtaggcacacgct
gagccagtcagtgtagcgcgcgtgcagccccggacatctaagggcatcac
agacctgttattgctcaatctcgggtggctgaacgccacttgtccctcta
agaagttgggggacgccgaccgctcgggggtcgcgtaactagttagcatg
ccagagtctcgttcgttatcggaattaaccagacaaatcgctccaccaac
taagaacggccatgcaccaccacccacggaatcgagaaagagctatcaat
ctgtcaatcctgtccgtgtccgggccgggtgaggtttcccgtgttgagtc
aaattaagccgcaggctccactcctggtggtgcccttccgtcaattcctt
taagtttcagctttgcaaccatactccccccggaacccaaagactttggt
ttcccggaagctgcccggcgggtcatgggaataacgccgccgcatcgcca
gtcggcatcgtttatggtcggaactacgacggtatctgatcgtcttcgaa
cctccgactttcgttcttgattaatgaaaacattcttggcaaatgctttc
gctctggtccgtcttgcgccggtccaagaatttcacctctagcggcgcaa
tacgaatgcccccggccgtccctcttaatcatggcctcagttccgaaaac
caacaaaatagaaccgcggtcctattccattattcctagctgcggtatcc
aggcggctcgggcctgctttgaacactctaattttttcaaagtaaacgct
tcgggccccgcgggacactcagctaagagcatcgagggggcgccgagagg
caagggggcggggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_22594135_22594889
seq2: B6Ng01-302I12.b_53_297 (reverse)

seq1  AAACATGAAGTAGAAATTCCAAATCATGTAAATATTGTCCAGATTTGGCC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTACAAATTCCTAAACTGGCAGGGTGAGGCTGAGTGAGAGTCATCCAGTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGGAGGTGAAAGGAAATAAAACTTGAGACATGTTATTCATGTAATTTA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCAAATAGCCCAAAGAGTTGTTTGTGAGCTTTAAAACCTGGGGCTGAG  200
                                                        
seq2  --------------------------------------------------  0

seq1  AACATAGCAGAACAGGCCAGGACATGCCCAGGCAGGCCCGTCGTTACATG  250
                                                        
seq2  --------------------------------------------------  0

seq1  TCCGGACTGGCCTAGTGCCTCCCTATCTCCCGCCCTTCTGACAGTTTGTT  300
                                                        
seq2  --------------------------------------------------  0

seq1  GATGTTTAAATGGACCAATCATGTGAAACCGCGCCAATTCCTCCCCCAGC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CCCACCCCTTTTCTATAAAAGTCCCTAGCTTCCAAGCCTCGGGGTCGAAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  CCACTGTCTCCTGCGTGAAATACGTTTCGAACTGGAGCTCCGCCATTATG  450
                         | || |   ||| | ||        |||   
seq2  -------------------AAACAT---GAAGTAGA-------AATT---  18

seq1  GCTCCACCATGTGGTCTACACCTCTGTCTCCTGCGGGAGATATGTGTCGG  500
       |   ||||| |                         | |||| ||||  
seq2  -CCAAACCATTT-------------------------AAATAT-TGTC--  39

seq1  CCTGGAGCTCCGTCATTA-AACTACCTCA--TGCTTTTACATCAAGATGG  547
           || |  | | ||| || | ||| |  |||  | |||       ||
seq2  ----CAGAT-TGGCTTTACAAATTCCTAAACTGC--TGACA-------GG  75

seq1  TCGTCTGTTCGTGATTCTT-GGGTGCACGCCGAACGAGAATTGAGTGGGG  596
                ||||  |||   ||| | |  | || ||   ||||||   
seq2  ----------GTGAGGCTTCTAGTGAAAG-TGTACTAG---TGAGTG---  108

seq1  GGTTTCCCCACTAGGTTCTTTCAGAGGCTTCCCCTTTCTGTTGGGGTGTA  646
                             ||| ||||| ||||||||| |||||| 
seq2  -----------------------GAGCCTTCCTCTTTCTGTTAGGGTGTG  135

seq1  TTATCAGCAACATTACCATTTCCAAAGAGCTAGGTATGGGCCT-ATTGTT  695
      |||||| |  |||||||||||||||||  ||||||||| |||| ||||||
seq2  TTATCAACTCCATTACCATTTCCAAAGTTCTAGGTATGAGCCTAATTGTT  185

seq1  TGGTTCAGTCAGTTGCCCAAGCCAGAGGAAATGTGGACTTGAAAGGACAG  745
      |||||||||||||||||  |||||||| |||||||||| |||||||||||
seq2  TGGTTCAGTCAGTTGCCAGAGCCAGAGCAAATGTGGACCTGAAAGGACAG  235

seq1  TGGGTTCAGA  755
      || |||||||
seq2  TGAGTTCAGA  245