BAC Information

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BAC

Clone NameB6Ng01-302M04
Chromosome2 (Build37)
Map Location 16,421,126 - 16,422,306
singlet/doubletsinglet
Overlap genePlxdc2
Upstream geneLOC625457
Downstream gene4930515L03Rik, LOC383665, Nebl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302M04.bB6Ng01-302M04.g
ACCGA096728GA096729
length1,1781,158
definitionB6Ng01-302M04.b B6Ng01-302M04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgttaaatttaagggctagtaacattaattttactcaataag
aatataggaaaaacaaaacaaaacagaacaaaccctcatttgtagcatcc
aaatacctatagcttattggacttcttaggctaagtacatagcaaattac
ccactgtcctcacaagtgcttgtatctagctttagtatctccccaaatta
ttttatgcatatttgtaaccactgtaacaacatacaaaaatcattgttat
ccttttggttttctacattttcctgattcagtagttcttcattgctgagg
tgtaagtcacattgacatagcatatttttacaccaactgtgagcagtctg
actttatgctgaagtgatgtgcatccatatctagatgtcaaataatgtaa
aatttaaatagcaataactgtcaccagattggttctctgagttctgtgtg
gctatttctttctatttatttttatgtttctgttaagagaaagtaggtcg
tgggacaataagtttattttctatcctattccttacccctccttctacct
tgtttaaaatttggactcttatatcagatatttgtgcatgctcttcacat
ggccagtcatcaatgaatttagtgcagttgtctcttgatttcagtcatat
gggtcattttcataactgtaatattggggttgtctgccatgggagctgag
tatttcttagaatttgggggctcagtagccgtatcaataaatggaaaata
gaagccacaaaatacctgttattcatacctttctggaaagatgaaaatag
tccaataatgtacataagaatttgagtcatctcaaggattacctaataat
gccctactatagttgcacaggcattaatacatgtttcttatttcatttgt
aagtaataaaatttactctaaaaatcaaatagtaaccctgcttctgtcta
ctttttgtaactactggttcaagataaatatgtaggattatgtctaaagt
atcagaataaaattaactttcaaagattttagaatgcacatatttcccta
tcccatccaacatgtaaacagacaaatggtcagattacatatcaatcttt
cagatctttatactctgccaggattttttaattttaggatgatcactaac
cttcatgtaatttagtcgagggttttgc

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagaa
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gggtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacactgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaagggatctgcaccctat
agtgaacaacattatgactacagtaccccggagctctgactctagcctgc
atatatatcaaagatggactagttcgtcattcacttgtaaagaagagcta
ttggactgcttacctttatatggcccctgtacagagggaattccacaggg
gtacccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_16421126_16422306
seq2: B6Ng01-302M04.b_45_1222

seq1  GAATTCCATGTTAAATTTAAGGGCTAGTAACATTAATTTTACTCAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTTAAATTTAAGGGCTAGTAACATTAATTTTACTCAATAAG  50

seq1  AATATAGGAAAAACAAAACAAAACAGAACAAACCCTCATTTGTAGCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGGAAAAACAAAACAAAACAGAACAAACCCTCATTTGTAGCATCC  100

seq1  AAATACCTATAGCTTATTGGACTTCTTAGGCTAAGTACATAGCAAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTATAGCTTATTGGACTTCTTAGGCTAAGTACATAGCAAATTAC  150

seq1  CCACTGTCCTCACAAGTGCTTGTATCTAGCTTTAGTATCTCCCCAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCCTCACAAGTGCTTGTATCTAGCTTTAGTATCTCCCCAAATTA  200

seq1  TTTTATGCATATTTGTAACCACTGTAACAACATACAAAAATCATTGTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCATATTTGTAACCACTGTAACAACATACAAAAATCATTGTTAT  250

seq1  CCTTTTGGTTTTCTACATTTTCCTGATTCAGTAGTTCTTCATTGCTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGGTTTTCTACATTTTCCTGATTCAGTAGTTCTTCATTGCTGAGG  300

seq1  TGTAAGTCACATTGACATAGCATATTTTTACACCAACTGTGAGCAGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCACATTGACATAGCATATTTTTACACCAACTGTGAGCAGTCTG  350

seq1  ACTTTATGCTGAAGTGATGTGCATCCATATCTAGATGTCAAATAATGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGCTGAAGTGATGTGCATCCATATCTAGATGTCAAATAATGTAA  400

seq1  AATTTAAATAGCAATAACTGTCACCAGATTGGTTCTCTGAGTTCTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATAGCAATAACTGTCACCAGATTGGTTCTCTGAGTTCTGTGTG  450

seq1  GCTATTTCTTTCTATTTATTTTTATGTTTCTGTTAAGAGAAAGTAGGTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTCTTTCTATTTATTTTTATGTTTCTGTTAAGAGAAAGTAGGTCG  500

seq1  TGGGACAATAAGTTTATTTTCTATCCTATTCCTTACCCCTCCTTCTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAATAAGTTTATTTTCTATCCTATTCCTTACCCCTCCTTCTACCT  550

seq1  TGTTTAAAATTTGGACTCTTATATCAGATATTTGTGCATGCTCTTCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATTTGGACTCTTATATCAGATATTTGTGCATGCTCTTCACAT  600

seq1  GGCCAGTCATCAATGAATTTAGTGCAGTTGTCTCTTGATTTCAGTCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTCATCAATGAATTTAGTGCAGTTGTCTCTTGATTTCAGTCATAT  650

seq1  GGGTCATTTTCATAACTGTAATATTGGGGTTGTCTGCCATGGGAGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATTTTCATAACTGTAATATTGGGGTTGTCTGCCATGGGAGCTGAG  700

seq1  TATTTCTTAGAATTTGGGGGCTCAGTAGCCGTATCAATAAATGGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAGAATTTGGGGGCTCAGTAGCCGTATCAATAAATGGAAAATA  750

seq1  GAAGCCACAAAATACCTGTTATTCATACCTTTCTGGAAAGATGAAAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACAAAATACCTGTTATTCATACCTTTCTGGAAAGATGAAAATAG  800

seq1  TCCAATAATGTACATAAGAATTTGAGTCATCTCAAGGATTACCTAATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAATGTACATAAGAATTTGAGTCATCTCAAGGATTACCTAATAAT  850

seq1  GCCCTACTATAGTTGCACAGGCATTAATACATGTTTCTTATTTCATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACTATAGTTGCACAGGCATTAATACATGTTTCTTATTTCATTTGT  900

seq1  AAGTAATAAAATTTACTCTAAAAATCAAATAGTAA-CCTGCTTCTGTCTA  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGTAATAAAATTTACTCTAAAAATCAAATAGTAACCCTGCTTCTGTCTA  950

seq1  CTTTTTGTAACTACTGGTTCAAGATAAATATGTAGGATTATGTCTAAAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTAACTACTGGTTCAAGATAAATATGTAGGATTATGTCTAAAGT  1000

seq1  ATCAGGAATAAAAATTAACTTCAAAAGATTTTAGAATGCACATA-TTCCC  1048
      |||| |||| |||||||||||  ||||||||||||||||||||| |||||
seq2  ATCA-GAAT-AAAATTAACTTTCAAAGATTTTAGAATGCACATATTTCCC  1048

seq1  TATTCCCAT-CAACATGGTAAACAGACAAAT-GTCAGATACAATATC-AT  1095
      || |||||| |||||| |||||||||||||| |||||||   ||||| ||
seq2  TA-TCCCATCCAACAT-GTAAACAGACAAATGGTCAGATTACATATCAAT  1096

seq1  CTTTCAGATC-TTATACTCTGGCAAGGATTTTTATATTTTAGGAATAGAT  1144
      |||||||||| ||||||||| || |||||||||  |||||||||   |||
seq2  CTTTCAGATCTTTATACTCT-GCCAGGATTTTTTAATTTTAGGA--TGAT  1143

seq1  CACAAAAACTTAAATGTTATTTTAGTCGA-GGTTTTGC  1181
      |||   ||| |  ||| || ||||||||| ||||||||
seq2  CAC--TAACCTTCATG-TAATTTAGTCGAGGGTTTTGC  1178


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