MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-303E02
Chromosome	2 (Build37)
Map Location	74,367,598 - 74,538,487
singlet/doublet	doublet
Overlap gene	Lnp, LOC100040519, Evx2, Hoxd13, Hoxd12, Hoxd11, Hoxd10, Hoxd9
Upstream gene	Chrna1, Chn1, Atf2, Atp5g3, LOC667729, LOC100040172
Downstream gene	Hoxd8, 1700109F18Rik, Hoxd3, Hoxd4, LOC667804, Hoxd1, Mtx2, LOC667817, A330043C09Rik, LOC667739, LOC545423, LOC100040324, LOC667828, Hnrpa3, Nfe2l2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Chrna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11435 MGI:87885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11909 MGI:109349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Atp5g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins pseudo : _no_value

name	LOC100040172 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Lnp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 90 ESTs, 6 Proteins

name	Evx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15430 MGI:96202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15438 MGI:96210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700109F18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Hoxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hoxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15436 MGI:96208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Hoxd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15429 MGI:96201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53375 MGI:1859652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667817 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	A330043C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329430 MGI:2685671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC667739 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1686 ESTs, 7 Proteins

name	LOC545423 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1081 ESTs, 10 Proteins

name	LOC100040324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC667828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Hnrpa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229279 MGI:1917171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nfe2l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802554 GeneID:11435 MGI:87885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) transcript_id : NM_007389.3

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371256 GeneID:108699 MGI:1915674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_175752.2

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130637 GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_029716.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799838 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_009715.2

name	Atf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68799915 GeneID:11909 MGI:109349
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating transcription factor 2 transcript_id : NM_001025093.1

name	Atp5g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348625 GeneID:228033 MGI:2442035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 transcript_id : NM_175015.2

name	LOC100040172 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249826 GeneID:100040172
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040172 transcript_id : XM_001474208.1

name	Lnp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872192 GeneID:69605 MGI:1918115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb and neural patterns transcript_id : NM_027133.2

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249844 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 88 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 2 transcript_id : XM_001475211.1

name	LOC100040519 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249842 GeneID:100040519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 89 ESTs, 6 Proteins product : similar to L23 mitochondrial-related protein, transcript variant 1 transcript_id : XM_001475192.1

name	Evx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131041 GeneID:14029 MGI:95462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : even skipped homeotic gene 2 homolog transcript_id : NM_007967.2

name	Hoxd13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120586993 GeneID:15433 MGI:96205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D13 transcript_id : NM_008275.2

name	Hoxd12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121583907 GeneID:15432 MGI:96204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D12 transcript_id : NM_008274.2

name	Hoxd11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680256 GeneID:15431 MGI:96203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D11 transcript_id : NM_008273.1

name	Hoxd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802469 GeneID:15430 MGI:96202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D10 transcript_id : NM_013554.3

name	Hoxd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542960 GeneID:15438 MGI:96210
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D9 transcript_id : NM_013555.2

name	Hoxd8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112807183 GeneID:15437 MGI:96209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D8 transcript_id : NM_008276.2

name	1700109F18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367053 GeneID:73429 MGI:1923875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700109F18 gene transcript_id : XM_992510.1

name	Hoxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126517501 GeneID:15434 MGI:96207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D3 transcript_id : NM_010468.2

name	Hoxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754237 GeneID:15436 MGI:96208
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D4 transcript_id : NM_010469.1

name	LOC667804 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367058 GeneID:667804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : similar to hCG17447 transcript_id : XM_992575.1

name	Hoxd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112983631 GeneID:15429 MGI:96201
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homeo box D1 transcript_id : NM_010467.2

name	Mtx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380213 GeneID:53375 MGI:1859652
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metaxin 2 transcript_id : NM_016804.3

name	A330043C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249846 GeneID:329430 MGI:2685671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA A330043C09 gene transcript_id : XM_001475470.1

name	LOC667739 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249848 GeneID:667739
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1686 ESTs, 7 Proteins product : similar to ribosomal protein S6, transcript variant 2 transcript_id : XM_001003926.2

name	LOC545423 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249849 GeneID:545423
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1081 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_619762.4

name	LOC100040324 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249836 GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001474502.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37674276 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_198090.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559915 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_146130.2

name	Nfe2l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573877 GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, erythroid derived 2, like 2 transcript_id : NM_010902.3

name	Chrna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542391 CCDS:CCDS16132.1 GeneID:11435 MGI:87885
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : acetylcholine receptor alpha; cholinergic receptor nicotinic alpha polypeptide 1 (muscle) product : cholinergic receptor, nicotinic, alpha 1 (muscle) protein_id : NP_031415.2

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461137 CCDS:CCDS16133.1 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; chimaerin product : chimerin (chimaerin) 1 isoform 1 protein_id : NP_786928.1

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386436 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; chimaerin product : chimerin (chimaerin) 1 isoform 2 protein_id : NP_083992.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68799916 CCDS:CCDS16134.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : activating transcription factor 2 isoform 1 protein_id : NP_001020264.1

name	Atf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468883 CCDS:CCDS16135.1 GeneID:11909 MGI:109349
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : activating transcription factor 2 isoform 2 protein_id : NP_033845.1

name	Atp5g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923925 CCDS:CCDS16136.1 GeneID:228033 MGI:2442035
definition	GO_component : GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 protein_id : NP_778180.1

name	LOC100040172 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249827 GeneID:100040172
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474258.1

name	Lnp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32441290 CCDS:CCDS16137.1 GeneID:69605 MGI:1918115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 note : lunapark product : limb and neural patterns protein_id : NP_081409.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249843 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 1 protein_id : XP_001475242.1

name	LOC100040519 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249845 GeneID:100040519
definition	codon_start : 1 product : similar to L23 mitochondrial-related protein isoform 2 protein_id : XP_001475261.1

name	Evx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679713 CCDS:CCDS16138.1 GeneID:14029 MGI:95462
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : even skipped homeotic gene 2 homolog protein_id : NP_031993.1

name	Hoxd13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120586994 CCDS:CCDS16139.1 GeneID:15433 MGI:96205
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeobox D13 protein_id : NP_032301.2

name	Hoxd12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121583908 GeneID:15432 MGI:96204
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D12 protein_id : NP_032300.2

name	Hoxd11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680257 CCDS:CCDS16140.1 GeneID:15431 MGI:96203
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0001656 - metanephros development [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D11 protein_id : NP_032299.1

name	Hoxd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560501 CCDS:CCDS16141.1 GeneID:15430 MGI:96202
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D10 protein_id : NP_038582.2

name	Hoxd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305153 CCDS:CCDS16142.1 GeneID:15438 MGI:96210
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D9 protein_id : NP_038583.1

name	Hoxd8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112807184 CCDS:CCDS16143.1 GeneID:15437 MGI:96209
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D8 protein_id : NP_032302.2

name	1700109F18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367054 GeneID:73429 MGI:1923875
definition	codon_start : 1 product : hypothetical protein LOC73429 protein_id : XP_997604.1

name	Hoxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754238 CCDS:CCDS16145.1 GeneID:15436 MGI:96208
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : homeo box D4 protein_id : NP_034599.1

name	Hoxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126517502 GeneID:15434 MGI:96207
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D3 protein_id : NP_034598.2

name	LOC667804 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367059 GeneID:667804
definition	codon_start : 1 product : similar to hCG17447 protein_id : XP_997669.1

name	Hoxd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983632 CCDS:CCDS16147.1 GeneID:15429 MGI:96201
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0007389 - pattern specification [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : homeo box D1 protein_id : NP_034597.2

name	Mtx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543274 CCDS:CCDS16148.1 GeneID:53375 MGI:1859652
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0019867 - outer membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : metaxin 2 protein_id : NP_058084.2

name	A330043C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249847 GeneID:329430 MGI:2685671
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475520.1

name	LOC667739 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367038 GeneID:667739
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001003926.1

name	LOC545423 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63487024 GeneID:545423
definition	codon_start : 1 product : hypothetical protein protein_id : XP_619762.1

name	LOC100040324 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249837 GeneID:100040324
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474552.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674277 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant a product : heterogeneous nuclear ribonucleoprotein A3 isoform a protein_id : NP_932758.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559916 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant b product : heterogeneous nuclear ribonucleoprotein A3 isoform b protein_id : NP_666242.2

name	Nfe2l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754832 CCDS:CCDS16150.1 GeneID:18024 MGI:108420
definition	GO_component : GO:0005737 - cytoplasm [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IGI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045995 - regulation of embryonic development [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA] codon_start : 1 product : nuclear factor, erythroid derived 2, like 2 protein_id : NP_035032.1

name	LOC667817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667817
definition	number : 2 pseudo : _no_value

name	LOC667817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667817
definition	number : 1 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 3 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 2 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 1 pseudo : _no_value

name	LOC667729 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249824 GeneID:667729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_031598.1

clone name	MSMg01-112A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-303E02.b	B6Ng01-303E02.g
ACC	GA097101	GA097102
length	1,162	1,079
definition	B6Ng01-303E02.b	B6Ng01-303E02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(74,367,598 - 74,368,752)	(74,537,407 - 74,538,487)
sequence	gaattcattatcatctttaataaatactgtgcttatattattcggctaca cacattatcaaaacacacactttagctaacatatttataccttcaatgag ctggctttctgctgagggcacactttctagtagcgtgggaccagttgagc ttgagccttccactgcctgcctcttctcaaaactaaactctggaagccgt ggagcttgaggtctcgtttttcttgcaggattcaagaaaaaacagtaggc acatcgaaaagctgcatagaatttttttttaaagaaaaaaaaaaagtcaa ccaaatttcaaaaatttatcagacaactcacaagattacttttataaata gccagattcaagttaaaatttttaacatgaattggttaccttattatata taaaaagtattcaaatcgacattaattttaaagcatattgcataattact atgagaatgtaaatattgattttaaagtagaaagggtataaaaagttaaa tagtagtacaatagcaaaattatataaaattatttaagtaattgacagaa cttgcatttctaatcaataaaataagtgtacattttgaaatccagaatct tgttcaagaagatgtagtatgctaaatttctgaagcaaaatttatcatgt gatcatttataacagctgcatgtgaaaataattgatgacctcaactgtaa atgctaatgcttagatcccacccccaataattaattcagactccctgtag atagaacaacatctgagaatagctggcctggaggctgtgcattataagaa agaacttgagttatcttttctgctttgttttagtattaaataaggagaca atgtacctggccagtatgtacagggcagtacctaaaataaagtgacatta cacaggatggacaagaatgatacattttcagagtaaaatgttaaccttaa ctatccataagtcccttaccaatatattcaaatttcttccttcaaagcca tgcccattgtgagaaaaacactgctgacatattggagggcgtactacaca cagagatatagactcagttacagaattagagctccaccagagaacgccac tcggctggtgctataattaaggatgataccgaatcattacaccagtatgg caagggtagttt	gaattcattgtggccctggctacaggatagtggaagtaccaagacacctt ccaaagttgtgctctcccgccaggtgtgcttacacaatcggaagcttcaa ggtgtctcagagaccctccaggtgctcggaccgccaacctttagcaacgt gtcccttttcagggatgggacagtctgatgattatgttattttgcaaaga cacagagagcagtcacacaacgttcagggccagcggctgggctccatttg ttcagatcagcatttatttgttggaagcggtaacatttacaactggtcct caggcaggaatatggaaggcaacctcccgaggccgcccaatgggagctca gccctcccggggagaaagtagcttccccggtgctctgaggactaagccta tccccaccccacccccaatctcgcgccccagggcccaaggtttctcggta ggcctctgtggaagtcagtccgccggctccccgaggaaaggggttttcct gccttgagcagctgagttggattttagttgggagagcagggtgggggtgt ccacactctgtcttccttcagattctcggaattagatcgttggccctgtt tgggaggctggatagggtgagactaaactacagcacttttcagaaacatg agggacatttacatagaatagggctccatcaagcctgcgtgcactcacaa aatatagcatttcctaaggaatcaggggagcagggaagggagggagtggg acaggacaagactccaaagccacttggtttctccaatacatatgcgagca aatacagtgtcccccagataactcacagagaccaaccacacagtcacttt ctacctaaaaaaagaagaaagtccgagtcgctgcagagtttcttgaatca agcacccccaagaaacaacaacaccaaaaaacaaaaacagacaactaaca atctaacaaaaacccgctgcccttttgagtgctgcagccagacccgcact ggggtcagtcttctttagggcactcttcgtgcttcatctgtttttcaatt tcatcttacggttctggaatcaagatttt
quality values	Open. Hide. 58 31 29 26 58 28 24 42 54 62 47 38 38 54 62 62 62 47 56 62 62 62 62 62 62 62 62 62 62 62 62 42 50 28 34 45 39 44 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 59 54 54 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 49 49 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 58 58 58 58 49 49 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 54 54 58 54 58 54 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 58 54 54 58 58 58 52 58 58 58 58 54 58 58 58 58 52 58 58 58 58 42 49 58 58 58 41 58 58 58 58 58 47 52 58 58 58 58 58 54 54 52 58 58 58 58 58 58 58 58 58 58 58 41 41 53 58 51 51 58 58 58 58 52 58 53 40 58 52 58 58 50 46 29 58 50 54 53 53 54 39 58 51 48 48 58 49 51 58 58 58 51 51 58 46 50 58 58 46 58 33 44 58 58 54 51 53 52 58 58 51 58 35 53 53 32 39 58 36 50 53 50 58 39 39 53 58 58 58 51 37 51 58 45 50 49 51 38 42 49 42 51 49 51 54 37 38 54 51 37 54 52 53 32 44 50 42 54 32 25 54 49 45 54 49 39 30 44 47 54 42 49 50 40 40 37 45 32 54 46 40 45 54 54 54 52 31 47 45 52 53 41 37 39 41 39 51 38 31 40 51 32 53 45 54 54 35 51 37 53 31 39 32 40 42 53 35 31 25 52 38 30 53 52 32 38 46 16 49 41 33 53 36 52 42 49 51 26 53 32 22 23 25 14 40 28 32 33 27 33 31 25 32 31 31 33 27 43 36 51 51 31 35 51 31 29 33 31 45 32 28 46 29 31 31 51 31 51 46 31 40 31 51 43 46 46 46 31 38 46 46 19 23 30 29 31 40 24 29 48 36 22 31 19 9 24 27 25 26 25 31 31 31 46 31 31 32 32 31 24 25 22 30 23 32 25 36 37 32 31 24 31 31 26 48 25 27 28 30 31 32 43 36 43 37 47 46 31 32 28 46 31 31 25 32 31 31 23 37 44 29 32 16 36 25 35 31 37 32 24 14 26 17 20 27 27 17 15 17 38 31 27 26 34 33 32 48 48 32 32 25 20 38 14 34 32 44 48 32 21 27 8 4 5 13 32 37 17 13 33 13 21 31 32 30 28 28 26 32 34 33 20 20 15 48 10 20 12 23 16 11 8 24 9 19 20 11 15 28 22 22 40 22 7 37 15 10 13 8 17 18 10 17 17 18 47 28 13 21 13 19 13 12 6 40 13 7 17 6 18 13 27 28 9 19 40 47 47 20 8 10 18 17 28 27 15 15 20 10 6 12 6 5 9 11 11 14 10 47 27 27 28 16 6 11 3 8 21 4 4 5 8 11 6 4 1 4 1 3 8 11 5 16 20 13 23 10 15 14 17 4 18 7 12 7 17 7 12 16 8 8 6 14 8 8 8 12 4 23 8 8 4 6 6 8 14 7 11 8 7 14 15 8 8 14 4 4 14 10 9 8 19 9 5 13 7 9 2 2 1 4 3 3 3 1 5 1 3 3 13 9 1 5 4 7 8 10 14 18 10 3 5 2 7 7 5 1 5 14 20 9 1 4 5 16 13 6 4 15 6 3 3 11	Open. Hide. 62 35 34 39 62 41 42 62 62 62 39 56 44 38 38 39 27 24 21 22 44 56 62 44 59 62 59 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 59 59 54 43 54 48 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 54 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 47 47 49 44 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 43 62 62 54 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 52 62 62 62 62 62 39 58 58 58 58 58 47 58 58 58 54 54 58 58 58 58 58 58 54 58 54 54 54 44 49 49 52 58 58 58 58 58 42 58 52 58 58 52 52 52 58 58 54 54 58 54 54 58 54 54 54 54 52 52 52 33 58 41 58 54 49 52 54 54 58 47 39 47 42 52 41 58 58 54 49 58 54 58 37 58 50 58 58 58 58 58 58 58 58 49 47 58 40 50 54 58 36 39 52 51 46 40 23 27 25 29 46 46 49 46 58 58 52 42 49 51 52 50 48 52 53 58 58 58 52 49 42 50 58 43 34 43 24 51 58 39 22 58 58 34 26 26 23 58 49 32 49 39 54 53 46 51 58 50 53 39 58 58 37 51 39 54 31 50 41 28 47 42 53 51 50 58 52 32 40 50 40 37 53 53 41 40 53 33 24 41 51 50 35 35 49 50 44 35 50 54 43 32 33 30 18 29 28 41 37 53 39 43 32 40 54 54 49 51 26 53 47 31 54 54 52 25 13 42 44 31 23 50 44 46 31 41 49 54 38 22 25 24 16 44 28 25 49 41 41 33 30 41 30 41 33 54 37 25 37 41 17 31 35 37 54 33 30 52 32 38 39 26 39 19 27 35 32 45 24 40 38 37 45 37 23 42 21 26 27 34 31 34 26 52 32 43 37 52 29 32 40 40 47 31 26 32 32 31 32 26 22 45 32 31 31 30 22 35 33 15 15 33 38 27 28 16 11 21 21 30 33 31 13 23 26 30 23 45 15 8 11 14 15 29 22 7 21 18 33 32 26 16 20 27 27 26 51 40 18 31 26 31 31 11 40 18 31 16 9 25 32 25 31 16 16 31 17 42 46 28 30 12 14 25 24 14 17 22 13 22 30 27 23 28 30 37 6 13 9 10 21 31 20 26 6 6 6 20 6 9 18 16 16 21 6 33 29 5 22 16 12 6 11 22 13 11 28 6 4 11 31 9 17 12 6 22 30 15 5 8 6 31 8 18 9 7 8 5 22 13 14 7 28 25 7 8 11 25 16 38 9 34 34 31 6 10 26 31 27 37 18 22 8 6 6 23 5 17 11 10 31 15 39 15 14 8 8 23 12 22 32 31 11 6 7 29 15 18 19 27 9 16 9 21 27 24 28 19 19 8 8 5 10 5 5 8 20 6 20 18 20 16 9 11 13 8 4 6 5 26 18 10 13 6 10 9 6 29 40 25 8 9 21 26 5 7 6 3 3 16 14 21 5 6 5 13 3 5 6 23 7 6 6 18 6 18 14 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_74367598_74368752
seq2: B6Ng01-303E02.b_45_1206

seq1  GAATTCATTATCATCTTTAATAAATACTGTGCTTATATTATTCGGCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATCATCTTTAATAAATACTGTGCTTATATTATTCGGCTACA  50

seq1  CACATTATCAAAACACACACTTTAGCTAACATATTTATACCTTCAATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTATCAAAACACACACTTTAGCTAACATATTTATACCTTCAATGAG  100

seq1  CTGGCTTTCTGCTGAGGGCACACTTTCTAGTAGCGTGGGACCAGTTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTCTGCTGAGGGCACACTTTCTAGTAGCGTGGGACCAGTTGAGC  150

seq1  TTGAGCCTTCCACTGCCTGCCTCTTCTCAAAACTAAACTCTGGAAGCCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCTTCCACTGCCTGCCTCTTCTCAAAACTAAACTCTGGAAGCCGT  200

seq1  GGAGCTTGAGGTCTCGTTTTTCTTGCAGGATTCAAGAAAAAACAGTAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTGAGGTCTCGTTTTTCTTGCAGGATTCAAGAAAAAACAGTAGGC  250

seq1  ACATCGAAAAGCTGCATAGAATTTTTTTTTAAAGAAAAAAAAAAAGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGAAAAGCTGCATAGAATTTTTTTTTAAAGAAAAAAAAAAAGTCAA  300

seq1  CCAAATTTCAAAAATTTATCAGACAACTCACAAGATTACTTTTATAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTCAAAAATTTATCAGACAACTCACAAGATTACTTTTATAAATA  350

seq1  GCCAGATTCAAGTTAAAATTTTTAACATGAATTGGTTACCTTATTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATTCAAGTTAAAATTTTTAACATGAATTGGTTACCTTATTATATA  400

seq1  TAAAAAGTATTCAAATCGACATTAATTTTAAAGCATATTGCATAATTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTATTCAAATCGACATTAATTTTAAAGCATATTGCATAATTACT  450

seq1  ATGAGAATGTAAATATTGATTTTAAAGTAGAAAGGGTATAAAAAGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATGTAAATATTGATTTTAAAGTAGAAAGGGTATAAAAAGTTAAA  500

seq1  TAGTAGTACAATAGCAAAATTATATAAAATTATTTAAGTAATTGACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTACAATAGCAAAATTATATAAAATTATTTAAGTAATTGACAGAA  550

seq1  CTTGCATTTCTAATCAATAAAATAAGTGTACATTTTGAAATCCAGAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATTTCTAATCAATAAAATAAGTGTACATTTTGAAATCCAGAATCT  600

seq1  TGTTCAAGAAGATGTAGTATGCTAAATTTCTGAAGCAAAATTTATCATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGAAGATGTAGTATGCTAAATTTCTGAAGCAAAATTTATCATGT  650

seq1  GATCATTTATAACAGCTGCATGTGAAAATAATTGATGACCTCAACTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTTATAACAGCTGCATGTGAAAATAATTGATGACCTCAACTGTAA  700

seq1  ATGCTAATGCTTAGATCCCACCCCCAATAATTAATTCAGACTCCCTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAATGCTTAGATCCCACCCCCAATAATTAATTCAGACTCCCTGTAG  750

seq1  ATAGAACAACATCTGAGAATAGCTGGCCTGGAGGCTGTGCATTATAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACAACATCTGAGAATAGCTGGCCTGGAGGCTGTGCATTATAAGAA  800

seq1  AGAACTTGAGTTATCTTTTCTGCTTTGTTTTAGTATTAAATAAGGAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTGAGTTATCTTTTCTGCTTTGTTTTAGTATTAAATAAGGAGACA  850

seq1  ATGTACCTGGCCAGTATGTACA-GGCAGTACCTAAAATAAAGTGACATTA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGTACCTGGCCAGTATGTACAGGGCAGTACCTAAAATAAAGTGACATTA  900

seq1  CACAGGATGGACAAGAATGATACA-TTTCAGAGTAAAATGTTTACC-TAA  947
      |||||||||||||||||||||||| ||||||||||||||||| ||| |||
seq2  CACAGGATGGACAAGAATGATACATTTTCAGAGTAAAATGTTAACCTTAA  950

seq1  CTATCCATAAGT-CCTTACCAATATATTCAAA-TTCTTCCTTCAAAGCCA  995
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  CTATCCATAAGTCCCTTACCAATATATTCAAATTTCTTCCTTCAAAGCCA  1000

seq1  TG-CCATTGTGAGAAAAACACTGCTGACATAT--GAGGGCGTACCTACAC  1042
      || |||||||||||||||||||||||||||||  ||||||||| ||||| 
seq2  TGCCCATTGTGAGAAAAACACTGCTGACATATTGGAGGGCGTA-CTACA-  1048

seq1  CACAGAGAAAATAAGACTCCAGTTACAGA--TAGAGCT-CACCAGAG-AC  1088
      |||||||| |   ||||| ||||||||||  ||||||| |||||||| ||
seq2  CACAGAGATA--TAGACT-CAGTTACAGAATTAGAGCTCCACCAGAGAAC  1095

seq1  GCCACTCGGCT-GTGCTATAATAAAGGAATGTTACCAAATCATTAACAAC  1137
      ||||||||||| |||||||||| |||| ||| |||| ||||||||   ||
seq2  GCCACTCGGCTGGTGCTATAATTAAGG-ATGATACCGAATCATTA--CAC  1142

seq1  CAGTATGG--AAGGTAGTTT  1155
      ||||||||  | ||||||||
seq2  CAGTATGGCAAGGGTAGTTT  1162

seq1: chr2_74537407_74538487
seq2: B6Ng01-303E02.g_66_1144 (reverse)

seq1  AAAATC-TGGTTCCAGAACCGTAGGATGAAAATGAAAA--AGATG-AGCA  46
      |||||| || ||||||||||||| ||||||| ||||||  ||||| ||||
seq2  AAAATCTTGATTCCAGAACCGTAAGATGAAATTGAAAAACAGATGAAGCA  50

seq1  AGGAGAAGTGCCCTAAAGGAGACTGA-CCCAGTGCGGGTCTGGCCTGCAG  95
       | || |||||||||||| ||||||| |||||||||||||||| ||||||
seq2  CGAAG-AGTGCCCTAAAGAAGACTGACCCCAGTGCGGGTCTGG-CTGCAG  98

seq1  CACTCAAAA-GGCAGCGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTTGT-  143
      ||||||||| |||||||||||      |||||| | ||||| ||| | | 
seq2  CACTCAAAAGGGCAGCGGGTT------TTTGTTAGATTGTTAGTTGTCTG  142

seq1  TTTTTGTTTTTTGTTGTTGTTTGTTTTCTTTGTGGGTGCTTGATTC-AGA  192
      ||||||||||||| ||||| ||||||   ||| ||||||||||||| |||
seq2  TTTTTGTTTTTTGGTGTTG-TTGTTT--CTTGGGGGTGCTTGATTCAAGA  189

seq1  AACTCTGCAGCGACTCGGACTTTCTTCTTTTTTTAGGTAG-AAGTGACTG  241
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACTCTGCAGCGACTCGGACTTTCTTCTTTTTTTAGGTAGAAAGTGACTG  239

seq1  TGTGGTTGGTCTCTGTGAGTTATCTGGGGGACACTGTATTTGCTCGCATA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGGTCTCTGTGAGTTATCTGGGGGACACTGTATTTGCTCGCATA  289

seq1  TGTATTGGAGAAACCAAGTGGCTTTGGAGTCTTGTCCTGTCCCACTCCCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGGAGAAACCAAGTGGCTTTGGAGTCTTGTCCTGTCCCACTCCCT  339

seq1  CCCTTCCCTGCTCCCCTGATTCCTTAGGAAATGCTATATTTTGTGAGTGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCTGCTCCCCTGATTCCTTAGGAAATGCTATATTTTGTGAGTGC  389

seq1  ACGCAGGCTTGATGGAGCCCTATTCTATGTAAATGTCCCTCATGTTTCTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGGCTTGATGGAGCCCTATTCTATGTAAATGTCCCTCATGTTTCTG  439

seq1  AAAAGTGCTGTAGTTTAGTCTCACCCTATCCAGCCTCCCAAACAGGGCCA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCTGTAGTTTAGTCTCACCCTATCCAGCCTCCCAAACAGGGCCA  489

seq1  ACGATCTAATTCCGAGAATCTGAAGGAAGACAGAGTGTGGACACCCCCAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCTAATTCCGAGAATCTGAAGGAAGACAGAGTGTGGACACCCCCAC  539

seq1  CCTGCTCTCCCAACTAAAATCCAACTCAGCTGCTCAAGGCAGGAAAACCC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTCCCAACTAAAATCCAACTCAGCTGCTCAAGGCAGGAAAACCC  589

seq1  CTTTCCTCGGGGAGCCGGCGGACTGACTTCCACAGAGGCCTACCGAGAAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCGGGGAGCCGGCGGACTGACTTCCACAGAGGCCTACCGAGAAA  639

seq1  CCTTGGGCCCTGGGGCGCGAGATTGGGGGTGGGGTGGGGATAGGCTTAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGCCCTGGGGCGCGAGATTGGGGGTGGGGTGGGGATAGGCTTAGT  689

seq1  CCTCAGAGCACCGGGGAAGCTACTTTCTCCCCGGGAGGGCTGAGCTCCCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGCACCGGGGAAGCTACTTTCTCCCCGGGAGGGCTGAGCTCCCA  739

seq1  TTGGGCGGCCTCGGGAGGTTGCCTTCCATATTCCTGCCTGAGGACCAGTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCGGCCTCGGGAGGTTGCCTTCCATATTCCTGCCTGAGGACCAGTT  789

seq1  GTAAATGTTACCGCTTCCAACAAATAAATGCTGATCTGAACAAATGGAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTTACCGCTTCCAACAAATAAATGCTGATCTGAACAAATGGAGC  839

seq1  CCAGCCGCTGGCCCTGAACGTTGTGTGACTGCTCTCTGTGTCTTTGCAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCGCTGGCCCTGAACGTTGTGTGACTGCTCTCTGTGTCTTTGCAAA  889

seq1  ATAACATAATCATCAGACTGTCCCATCCCTGAAAAGGGACACGTTGCTAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAATCATCAGACTGTCCCATCCCTGAAAAGGGACACGTTGCTAA  939

seq1  AGGTTGGCGGTCCGAGCACCTGGAGGGTCTCTGAGACACCTTGAAGCTTC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGCGGTCCGAGCACCTGGAGGGTCTCTGAGACACCTTGAAGCTTC  989

seq1  CGATTGTGTAAGCACACCTGGCGGGAGAGCACAACTTTGGAAGGTGTCTT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTGTAAGCACACCTGGCGGGAGAGCACAACTTTGGAAGGTGTCTT  1039

seq1  GGTACTTCCACTATCCTGTAGCCAGGGCCACAATGAATTC  1081
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTCCACTATCCTGTAGCCAGGGCCACAATGAATTC  1079

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BAC

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Alignment Information