BAC Information

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BAC

Clone NameB6Ng01-303O06
Chromosome2 (Build37)
Map Location 62,876,363 - 63,008,121
singlet/doubletdoublet
Overlap geneKcnh7
Upstream geneSlc4a10, Dpp4, Gcg, Fap, Ifih1, Gca
Downstream geneEG667257, Fign
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303O06.bB6Ng01-303O06.g
ACCGA097580GA097581
length1,0931,121
definitionB6Ng01-303O06.b B6Ng01-303O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,876,363 - 62,877,455)(63,006,999 - 63,008,121)
sequence
gaattcactgcttttacaaatggtgtaaatgttaatatataaatcacaga
aatgtcattcctaattgtgtacactggtatacatggtgtatacaatttta
tgtttttattgagtataatagtttgaatgttaaatatacattgattgctt
ttgaagttagagaggaactagctaattggaagatcttgaaatcataccaa
tagctttgtttagatctgtaatgttaaaaaaattacaatatttctatgtg
ccttatttcctgaatatctgtctgaagagctatcattttctgaatattca
tcattaaaagctaaggcaagacatggtttctcaacaaatagtgtctaaga
cttctttaccaagtgttttgtatcgatggaccttacttattatctgatgg
catgtttgcctattccttcttcttaagagaatgcaaacaggcatagaaga
tagcactaagtagccattaacatagtttacagtttatttatttagcattg
ttttttagccaaagaaaaaattgtttttatgccaaatgatccatgactct
ctactgcagggcatggccaaatcatgatgttaatctatctgtacagtgat
acattaaattttagtgtatctagatttatttctctctgttcaacacatta
gactttcaagctatttaaacatctcacttgacatcaaataagcaaattat
tccttactgagacagcacagatgttttaaaaataatttagtatctaaaaa
tcattatttcattacttgcaaatagtagtgtctagagtcaaaaatagccc
ttgaatccattaccctagattcctcgttattttttgagatgtaggcatta
caataggggcagttggtggtttattccaagctatctaaatggtaaatggc
aggatccactctgctgagtccttctctgcttagtttccagcttgtgtctt
aactgacatctcaaatgatccttaagcatttgacaccacttctaataaag
ttcaacccaaattactctcacattttttattgtcagttacatttcacatc
taaaagtcataccctaacctattctttaactgcctcactgaga
gaattcagttcagaggcagtttttatcaagacaattttacagaaacaagt
tacagactgaatgagctagactcagttgaaaatagaaggagccagagcat
gagaaggagccagaagattagaacaaatttccagagttagtttgaggaca
agcagagcaaatcaatgaaaagaaaagagaaacgaaccccagtttgaatc
agtcatcttggagaagagttttgagccctaccagccgagttgaaccagac
agccagagttcagaaagaactggaaagggtaggtttactgaccagttaga
tgacaatgaaatctggtgaataaatgcagctagaacaatagagaaaagct
gttttctgtgagaaaacagaagcaaagaatagagaaaaacagaatagcag
tcttgtaaggaaaatgagtacctggggaaaaggggaagcccccaagctag
agctagagggggtttaaggtagagcaggaggagtaagaagctgagagtct
agcatgaactttgaaataggtaacaggtacttgtaacacagagggagccc
tgaggtgagcatgtgctttgatatgctgatgcataacccaggcagacaaa
tgtcccttcttccagaagtaaaagaactactactccctttggcagatagg
agccaggttcataagtttctagggggatgctggctgttatctgtcagaaa
tcctcctacagcccaggttgacatcatttctggatattttggagttcagg
gaattgggatttcctttagacctaacactactcttttaaaatatttcctt
taaaaaaattctaccacacctgaagaagtaggtactttatagtttccatt
ttaaagattgaaatcatgaagattagcttgctttctcaaggctatggaga
ctgtctggaacaaccaccatctgagcatcctttgtcttctttcagaaccc
tataactgaagtccctactacacctcagtccacctctgagccctttcttg
cagatgcagggccatgcacacctcatactcatggggacaaatcgtctcta
acagaaaatgtaattaatttctgattcacagacctgtgatggccattcca
tagtgtcaactgacactctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62876363_62877455
seq2: B6Ng01-303O06.b_49_1141

seq1  GAATTCACTGCTTTTACAAATGGTGTAAATGTTAATATATAAATCACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTTTTACAAATGGTGTAAATGTTAATATATAAATCACAGA  50

seq1  AATGTCATTCCTAATTGTGTACACTGGTATACATGGTGTATACAATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTCCTAATTGTGTACACTGGTATACATGGTGTATACAATTTTA  100

seq1  TGTTTTTATTGAGTATAATAGTTTGAATGTTAAATATACATTGATTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATTGAGTATAATAGTTTGAATGTTAAATATACATTGATTGCTT  150

seq1  TTGAAGTTAGAGAGGAACTAGCTAATTGGAAGATCTTGAAATCATACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTAGAGAGGAACTAGCTAATTGGAAGATCTTGAAATCATACCAA  200

seq1  TAGCTTTGTTTAGATCTGTAATGTTAAAAAAATTACAATATTTCTATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTGTTTAGATCTGTAATGTTAAAAAAATTACAATATTTCTATGTG  250

seq1  CCTTATTTCCTGAATATCTGTCTGAAGAGCTATCATTTTCTGAATATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTCCTGAATATCTGTCTGAAGAGCTATCATTTTCTGAATATTCA  300

seq1  TCATTAAAAGCTAAGGCAAGACATGGTTTCTCAACAAATAGTGTCTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAGCTAAGGCAAGACATGGTTTCTCAACAAATAGTGTCTAAGA  350

seq1  CTTCTTTACCAAGTGTTTTGTATCGATGGACCTTACTTATTATCTGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTACCAAGTGTTTTGTATCGATGGACCTTACTTATTATCTGATGG  400

seq1  CATGTTTGCCTATTCCTTCTTCTTAAGAGAATGCAAACAGGCATAGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGCCTATTCCTTCTTCTTAAGAGAATGCAAACAGGCATAGAAGA  450

seq1  TAGCACTAAGTAGCCATTAACATAGTTTACAGTTTATTTATTTAGCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTAAGTAGCCATTAACATAGTTTACAGTTTATTTATTTAGCATTG  500

seq1  TTTTTTAGCCAAAGAAAAAATTGTTTTTATGCCAAATGATCCATGACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGCCAAAGAAAAAATTGTTTTTATGCCAAATGATCCATGACTCT  550

seq1  CTACTGCAGGGCATGGCCAAATCATGATGTTAATCTATCTGTACAGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCAGGGCATGGCCAAATCATGATGTTAATCTATCTGTACAGTGAT  600

seq1  ACATTAAATTTTAGTGTATCTAGATTTATTTCTCTCTGTTCAACACATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAATTTTAGTGTATCTAGATTTATTTCTCTCTGTTCAACACATTA  650

seq1  GACTTTCAAGCTATTTAAACATCTCACTTGACATCAAATAAGCAAATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCAAGCTATTTAAACATCTCACTTGACATCAAATAAGCAAATTAT  700

seq1  TCCTTACTGAGACAGCACAGATGTTTTAAAAATAATTTAGTATCTAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTGAGACAGCACAGATGTTTTAAAAATAATTTAGTATCTAAAAA  750

seq1  TCATTATTTCATTACTTGCAAATAGTAGTGTCTAGAGTCAAAAATAGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTTCATTACTTGCAAATAGTAGTGTCTAGAGTCAAAAATAGCCC  800

seq1  TTGAATCCATTACCCTAGATTCCTCGTTATTTTTTGAGATGTAGGCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCATTACCCTAGATTCCTCGTTATTTTTTGAGATGTAGGCATTA  850

seq1  CAATAGGGGCAGTTGGTGGTTTATTCCAAGCTATCTAAATGGTAAATGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGGGCAGTTGGTGGTTTATTCCAAGCTATCTAAATGGTAAATGGC  900

seq1  AGGATCCACTCTGCTGAGTCCTTCTCTGCTTAGTTTCCAGCTTGTGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCACTCTGCTGAGTCCTTCTCTGCTTAGTTTCCAGCTTGTGTCTT  950

seq1  AACTGACATCTCAAATGATCCTTAAGCATTTGACAACCACTTCTAATAAG  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  AACTGACATCTCAAATGATCCTTAAGCATTTGAC-ACCACTTCTAATAAA  999

seq1  GTTTCAACCAAATTACTCTTCACATTTTT--ATGTCAGTTTACATTTCAA  1048
      |||  | ||||||||||| ||||||||||   |||||| ||||||||| |
seq2  GTTCAACCCAAATTACTC-TCACATTTTTTATTGTCAG-TTACATTTC-A  1046

seq1  CATCTAAAAGTCATA-CCTAACCTATTC-TTAACTGCCTCACTGAGA  1093
      ||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  CATCTAAAAGTCATACCCTAACCTATTCTTTAACTGCCTCACTGAGA  1093

seq1: chr2_63006999_63008121
seq2: B6Ng01-303O06.g_66_1186 (reverse)

seq1  ATAGA-TGTCAAGTTGACAACTAT-GAATAGCCACCACA-GTCTGTGAAT  47
      ||||| |||| ||||||| ||||| |||| |||| |||| ||||||||| 
seq2  ATAGAGTGTC-AGTTGAC-ACTATGGAATGGCCATCACAGGTCTGTGAA-  47

seq1  TCAGAAATTATTTACAATTTTCTGTTAAGAGACGATTTGTCCCCATGAGT  97
      |||||||||| |||| |||||||||| |||||||||||||||||||||||
seq2  TCAGAAATTAATTAC-ATTTTCTGTT-AGAGACGATTTGTCCCCATGAGT  95

seq1  ATGGAGTGTGGCATGGCCCTGCATCTGCAAGAAAGGGCTCAGA-GTGGAC  146
      |||  |||| ||||||||||||||||||||||||||||||||| ||||||
seq2  ATGAGGTGT-GCATGGCCCTGCATCTGCAAGAAAGGGCTCAGAGGTGGAC  144

seq1  TGAGGTGTAGTAGGGACCTTCAGTTATA-GGTTCTGAAAGAAGACAAAGG  195
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TGAGGTGTAGTAGGGA-CTTCAGTTATAGGGTTCTGAAAGAAGACAAAGG  193

seq1  ATGCTCAGATGGTGGTTGTTCCAGACAGTCTCCATAGCCTTGAGAAAGCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGATGGTGGTTGTTCCAGACAGTCTCCATAGCCTTGAGAAAGCA  243

seq1  AGCTAATCTTCATGATTTCAATCCTTAAAATGGAAACTATAAAGTACCTA  295
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCTAATCTTCATGATTTCAATCTTTAAAATGGAAACTATAAAGTACCTA  293

seq1  CTTCTTCAGGTGTGGTAGAATTTTTTTAAAGGAAATATTTTAAAAGAGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAGGTGTGGTAGAATTTTTTTAAAGGAAATATTTTAAAAGAGTA  343

seq1  GTGTTAGGTCTAAAGGAAATCCCAATTCCCTGAACTCCAAAATATCCAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGGTCTAAAGGAAATCCCAATTCCCTGAACTCCAAAATATCCAGA  393

seq1  AATGATGTCAACCTGGGCTGTAGGAGGATTTCTGACAGATAACAGCCAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTCAACCTGGGCTGTAGGAGGATTTCTGACAGATAACAGCCAGC  443

seq1  ATCCCCCTAGAAACTTATGAACCTGGCTCCTATCTGCCAAAGGGAGTAGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTAGAAACTTATGAACCTGGCTCCTATCTGCCAAAGGGAGTAGT  493

seq1  AGTTCTTTTACTTCTGGAAGAAGGGACATTTGTCTGCCTGGGTTATGCAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTACTTCTGGAAGAAGGGACATTTGTCTGCCTGGGTTATGCAT  543

seq1  CAGCATATCAAAGCACATGCTCACCTCAGGGCTCCCTCTGTGTTACAAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATCAAAGCACATGCTCACCTCAGGGCTCCCTCTGTGTTACAAGT  593

seq1  ACCTGTTACCTATTTCAAAGTTCATGCTAGACTCTCAGCTTCTTACTCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTACCTATTTCAAAGTTCATGCTAGACTCTCAGCTTCTTACTCCT  643

seq1  CCTGCTCTACCTTAAACCCCCTCTAGCTCTAGCTTGGGGGCTTCCCCTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTACCTTAAACCCCCTCTAGCTCTAGCTTGGGGGCTTCCCCTTT  693

seq1  TCCCCAGGTACTCATTTTCCTTACAAGACTGCTATTCTGTTTTTCTCTAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGGTACTCATTTTCCTTACAAGACTGCTATTCTGTTTTTCTCTAT  743

seq1  TCTTTGCTTCTGTTTTCTCACAGAAAACAGCTTTTCTCTATTGTTCTAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTCTGTTTTCTCACAGAAAACAGCTTTTCTCTATTGTTCTAGC  793

seq1  TGCATTTATTCACCAGATTTCATTGTCATCTAACTGGTCAGTAAACCTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATTCACCAGATTTCATTGTCATCTAACTGGTCAGTAAACCTAC  843

seq1  CCTTTCCAGTTCTTTCTGAACTCTGGCTGTCTGGTTCAACTCGGCTGGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGTTCTTTCTGAACTCTGGCTGTCTGGTTCAACTCGGCTGGTA  893

seq1  GGGCTCAAAACTCTTCTCCAAGATGACTGATTCAAACTGGGGTTCGTTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCAAAACTCTTCTCCAAGATGACTGATTCAAACTGGGGTTCGTTTC  943

seq1  TCTTTTCTTTTCATTGATTTGCTCTGCTTGTCCTCAAACTAACTCTGGAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTTCATTGATTTGCTCTGCTTGTCCTCAAACTAACTCTGGAA  993

seq1  ATTTGTTCTAATCTTCTGGCTCCTTCTCATGCTCTGGCTCCTTCTATTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCTAATCTTCTGGCTCCTTCTCATGCTCTGGCTCCTTCTATTTT  1043

seq1  CAACTGAGTCTAGCTCATTCAGTCTGTAACTTGTTTCTGTAAAATTGTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAGTCTAGCTCATTCAGTCTGTAACTTGTTTCTGTAAAATTGTCT  1093

seq1  TGATAAAAACTGCCTCTGAACTGAATTC  1123
      ||||||||||||||||||||||||||||
seq2  TGATAAAAACTGCCTCTGAACTGAATTC  1121