BAC Information

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BAC

Clone NameB6Ng01-304A10
Chromosome2 (Build37)
Map Location 53,424,756 - 53,425,837
singlet/doubletsinglet
Overlap genenone
Upstream geneCacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6, LOC666872, LOC666876
Downstream geneLOC207933, Rprm, LOC666913, LOC626563, LOC100041792, LOC100042878, Galnt13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304A10.bB6Ng01-304A10.g
ACCGA097682GA097683
length1,0931,102
definitionB6Ng01-304A10.b B6Ng01-304A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctcagctgacagtatgtatgaattatcacttcctcttcagg
caagtgagactgaacaacacctattaagaagcggccctacaggaagttga
tcaagaaatccctgtaccttttagacatgaaaaccccaactaaatcaaga
accatgttactaagtagtcatagaaggcagaggcaactggagagtgggaa
tgataaaagagaaagagagggaaatagggaggcaagatcagatgcaggga
gagacaggagagaagccgagtagcccaggaaaatgaatgtagttgcctgg
tttgtggggaggggaaaatctctagaaagttccagagatgtggaatacgg
aggttctcgggattcagtgtagttgaccttagcaggggatgcctaaccgt
agggacatggaacctctagaggccaccttcaggcaggcaggacccccagg
ggaaggatagggacacaaacccacccattaaatgttcaacccaaaattta
tcctgtctaaaagaaatgcagagatggagcagagactgaaggaatggcca
accaataactggcccaacttgaaacccatcccataggcaaacacaagtca
ctggcattattaatgatactctgtacttacagataggagcctagcataaa
tgtcttcggagtggctataaccagaagcagacagaaacagaagcagatac
ccacagccaaatattagctggaggtcaaggacacctatggaagagttggg
ggaaggatgaaaggcacagagtagatgggacctctataagaaggccaaca
gaatcaacaaacctggacccctaggagctctcagaatctgatctaccaaa
gaacatacactggctgaaatgaggatcctggcacatatgttgcagacagg
cagctcagtcttatggaaactttgttggctgctctgtggaacagagtgcc
taatctggcagagacttgatgtgccaggtgagggatacccagggagtccc
accctctcgaggaaagagtgcagtatgggaatgaccttgtttagaaggac
tagagcggaacctggattagatatactcaccaactacagatcg
gaattcattgtttttaattgctgagtagtactccattgtgtaaatgtaca
ttttctgtatccattcctctgttgagggacatctgggttctttccagctt
ctggctattataaataaggcttctatgaacatagtggagcatgtgtcctt
attacaagttggaacatctgggtatattcccaggagaggaattgctggat
cttctggtagtactatttctagttttttgaggaacctccagactgatttc
cagagtggttgtaccagcttgcaatctcaccaacaatggaggagtgttcc
tctttctccacatccttgccagcatctgctgtcacctgaatttttgatct
tagccattctgactggtgtgaggtggaatctcagggttgttttgatttgc
attttcctgatgattaaggatgctgaacatttttctcagttgcttctcaa
ccattcggtattcctcagttgagaattctttgtttagctctgtaccccat
ttcttttattaaggataagagagtagctgggctgtgcactgccctggggg
aaggctgtggtagcagcagaataggagaatcagttatttggtagatttta
gttttacaggatggtttatatgtgcaaggggaaaacaattgttttgagag
atcaaaatgttttagagtttgaagaatctgagcatttttatgggattcaa
acccaaaagtactgaagtcctcaggacatgaagcatgccacaaacctatt
atgaaaactgccaaagacagtttccatcacccaaactcgataaaacttca
caagagcaaagaaactccaggaaaaaaagaaagtggggtcttaaaatctc
tattgattatgtggggcttcctggagagaacagaaattaaaacctccaga
tgtgttcaagtactcatgatcagaggggtcattggcaggtccctcatagg
ttcatgtattcagatatttgattcttagataatgggtatggttttgaaat
tccagatggtaggatctagccggagagtaggattctagggagtattgttg
tttcttctctgtacttcttgtcacagaattatttcttgacagcatgatgt
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53424756_53425837
seq2: B6Ng01-304A10.g_85_1168

seq1  TGCTGAGTAGTACTCCATTGTGTAAATGTACATTTTCTGTATCCATTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGTAGTACTCCATTGTGTAAATGTACATTTTCTGTATCCATTCCT  50

seq1  CTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAG  100

seq1  GCTTCTATGAACATAGTGGAGCATGTGTCCTTATTACAAGTTGGAACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATGAACATAGTGGAGCATGTGTCCTTATTACAAGTTGGAACATC  150

seq1  TGGGTATATTCCCAGGAGAGGAATTGCTGGATCTTCTGGTAGTACTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATATTCCCAGGAGAGGAATTGCTGGATCTTCTGGTAGTACTATTT  200

seq1  CTAGTTTTTTGAGGAACCTCCAGACTGATTTCCAGAGTGGTTGTACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTTGAGGAACCTCCAGACTGATTTCCAGAGTGGTTGTACCAGC  250

seq1  TTGCAATCTCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATCTCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTG  300

seq1  CCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTG  350

seq1  TGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTTCCTGATGATTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTTCCTGATGATTAAG  400

seq1  GATGCTGAACATTTTTCTCAGTTGCTTCTCAACCATTCGGTATTCCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGAACATTTTTCTCAGTTGCTTCTCAACCATTCGGTATTCCTCAG  450

seq1  TTGAGAATTCTTTGTTTAGCTCTGTACCCCATTTCTTTTATTAAGGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATTCTTTGTTTAGCTCTGTACCCCATTTCTTTTATTAAGGATAA  500

seq1  GAGAGTAGCTGGGCTGTGCACTGCCCTGGGGGAAGGCTGTGGTAGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAGCTGGGCTGTGCACTGCCCTGGGGGAAGGCTGTGGTAGCAGCA  550

seq1  GAATAGGAGAATCAGTTATTTGGTAGATTTTAGTTTTACAGGATGGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAGAATCAGTTATTTGGTAGATTTTAGTTTTACAGGATGGTTTA  600

seq1  TATGTGCAAGGGGAAAACAATTGTTTTGAGAGATCAAAATGTTTTAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCAAGGGGAAAACAATTGTTTTGAGAGATCAAAATGTTTTAGAGT  650

seq1  TTGAAGAATCTGAGCATTTTTATGGGATTCAAACCCAAAAGTACTGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAATCTGAGCATTTTTATGGGATTCAAACCCAAAAGTACTGAAGT  700

seq1  CCTCAGGACATGAAGCATGCCACAAACCTATTATGAAAACTGCCAAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGACATGAAGCATGCCACAAACCTATTATGAAAACTGCCAAAGAC  750

seq1  AGTTTCCATCACCCAAACTCGATAAAACTTCACAAGAGCAAAGAAACTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATCACCCAAACTCGATAAAACTTCACAAGAGCAAAGAAACTCC  800

seq1  AGGAAAAAAAGAAAGTGGGGTCTTAAAATCTCTATTGATTATGTGGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAGAAAGTGGGGTCTTAAAATCTCTATTGATTATGTGGGGCT  850

seq1  TCCTGGAGAGAACAGAAATTAAAACCTCCAGATGTGTTCAAGTACTCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGAGAACAGAAATTAAAACCTCCAGATGTGTTCAAGTACTCATG  900

seq1  ATCAGAGGGGTCATTGGCAGGTCCCTCATAGGTTCATGTA-TCAGATATT  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCAGAGGGGTCATTGGCAGGTCCCTCATAGGTTCATGTATTCAGATATT  950

seq1  TGATTCTTAGATAAT-GGTATGGTTTTGAAATTCCAGATGGTAGGATCTA  998
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGATTCTTAGATAATGGGTATGGTTTTGAAATTCCAGATGGTAGGATCTA  1000

seq1  GCCGGAGGAAGTAGGATTCTAGGGAGTA-TGTTGTTTCTCTCCTGTACTT  1047
      |||||||  ||||||||||||||||||| ||||||||||   ||||||||
seq2  GCCGGAG--AGTAGGATTCTAGGGAGTATTGTTGTTTCTTCTCTGTACTT  1048

seq1  CCTGTCCACAGGAATATT--CTGACAGCATGATGTTC  1082
      | ||| ||||| | ||||   ||||||||||||||||
seq2  CTTGT-CACAGAATTATTTCTTGACAGCATGATGTTC  1084