BAC Information

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BAC

Clone NameB6Ng01-305G17
Chromosome2 (Build37)
Map Location 156,440,652 - 156,639,113
singlet/doubletdoublet
Overlap geneDlgap4, Myl9, LOC433546
Upstream geneMyh7b, Trpc4ap, Edem2, Procr, Mmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik, Gdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik
Downstream geneTgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal, Src, Blcap, Nnat, Ctnnbl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G17.bB6Ng01-305G17.g
ACCGA098715GA098716
length307812
definitionB6Ng01-305G17.b B6Ng01-305G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(156,440,652 - 156,440,958)(156,638,304 - 156,639,113)
sequence
ttccctcaggtggctacctctctccccttcctctggtatagaaaactgtg
ggctgcctgggccaagggtggtccgaggggcctgagccagactgttaagg
acagcgggactgggtggggccgcagagctggcttccgggctgatagccga
ggctcgggttggggggccatcctccccctcagctgggcttcagcgactgc
tcaacaagctccgagtatgttcccagtagcttctgacgatgctgtctgtg
cacgtggggcaggcgtgtgtgcctgtgtctgtattggggttggggtggga
tagagtg
gaattctaggcacataggagccttgtgatgcagacactggcaataaaacc
cagttcctctgcgagagcagagagcagccggcactcctaacttctgagcc
agctctccatccctgaaggccagttttgaccttgaattttgtttttcccc
ccaaagatagatagggaggggaggcagagagagagagagagagagaaaga
gagagagagagagagagcgagagagagagaatgtgtgagtgcctacatgg
catgtatgtgggcatgtgtgtgagggtacttaagtaaactgctatgtagg
agctgggaattgaacccatgtcctctggaagagtagccagtgctgttgat
cactgagccgtctgtctattgtctaatctcagcgtgtttcctccttaaag
gtaaagaacacttactatgtttccatagtctgtgcttagagcaagagcct
gctggaaggtcttggtcagggtggtgtcatggctggaggaacttgacaac
cagttacctgacgtttcttgtggtaggtgtgaggcttggctggggaatac
caggaatcctgctcagggggctttgttcatcctcttgtgtgcttcagata
ccctagtttttctatctgcagatttttttttttttaaagatttatttatt
atatgtaagtacactgtcttcagacacaccagaagagggcatcagatctc
gttacggatggttgtgagccacatgtggttgctgggatttgaactctgga
cctttgggaagagcagtcaggtgctcttaccccactgagccatcttaccc
tccccctatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_156440652_156440958
seq2: B6Ng01-305G17.b_54_360

seq1  TTCCCTCAGGTGGCTACCTCTCTCCCCTTCCTCTGGTATAGAAAACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGGTGGCTACCTCTCTCCCCTTCCTCTGGTATAGAAAACTGTG  50

seq1  GGCTGCCTGGGCCAAGGGTGGTCCGAGGGGCCTGAGCCAGACTGTTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTGGGCCAAGGGTGGTCCGAGGGGCCTGAGCCAGACTGTTAAGG  100

seq1  ACAGCGGGACTGGGTGGGGCCGCAGAGCTGGCTTCCGGGCTGATAGCCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGGGACTGGGTGGGGCCGCAGAGCTGGCTTCCGGGCTGATAGCCGA  150

seq1  GGCTCGGGTTGGGGGGCCATCCTCCCCCTCAGCTGGGCTTCAGCGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGGTTGGGGGGCCATCCTCCCCCTCAGCTGGGCTTCAGCGACTGC  200

seq1  TCAACAAGCTCCGAGTATGTTCCCAGTAGCTTCTGACGATGCTGTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAGCTCCGAGTATGTTCCCAGTAGCTTCTGACGATGCTGTCTGTG  250

seq1  CACGTGGGGCAGGCGTGTGTGCCTGTGTCTGTATTGGGGTTGGGGTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGGGCAGGCGTGTGTGCCTGTGTCTGTATTGGGGTTGGGGTGGGA  300

seq1  TAGAGTG  307
      |||||||
seq2  TAGAGTG  307

seq1: chr2_156638304_156639113
seq2: B6Ng01-305G17.g_69_880 (reverse)

seq1  CAGATA-GGGGCTGGTAAGATGGCTCAGT-GGGTAAGAGCACCTGACTGC  48
      || ||| ||||  |||||||||||||||| ||||||||||||||||||||
seq2  CAAATAGGGGGAGGGTAAGATGGCTCAGTGGGGTAAGAGCACCTGACTGC  50

seq1  TCTT-CCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCAC  97
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTTCCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACAT-GTGGCTCAC  99

seq1  AACCATCCGTAACGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCGTAACGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAG  149

seq1  TGTACTTACATATAATAAATAAATCTTTAAAAAAAAAAAAATCTGCAGAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTACATATAATAAATAAATCTTTAAAAAAAAAAAAATCTGCAGAT  199

seq1  AGAAAAACTAGGGTATCTGAAGCACACAAGAGGATGAACAAAGCCCCCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACTAGGGTATCTGAAGCACACAAGAGGATGAACAAAGCCCCCTG  249

seq1  AGCAGGATTCCTGGTATTCCCCAGCCAAGCCTCACACCTACCACAAGAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATTCCTGGTATTCCCCAGCCAAGCCTCACACCTACCACAAGAAA  299

seq1  CGTCAGGTAACTGGTTGTCAAGTTCCTCCAGCCATGACACCACCCTGACC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGGTAACTGGTTGTCAAGTTCCTCCAGCCATGACACCACCCTGACC  349

seq1  AAGACCTTCCAGCAGGCTCTTGCTCTAAGCACAGACTATGGAAACATAGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTTCCAGCAGGCTCTTGCTCTAAGCACAGACTATGGAAACATAGT  399

seq1  AAGTGTTCTTTACCTTTAAGGAGGAAACACGCTGAGATTAGACAATAGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTCTTTACCTTTAAGGAGGAAACACGCTGAGATTAGACAATAGAC  449

seq1  AGACGGCTCAGTGATCAACAGCACTGGCTACTCTTCCAGAGGACATGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGCTCAGTGATCAACAGCACTGGCTACTCTTCCAGAGGACATGGGT  499

seq1  TCAATTCCCAGCTCCTACATAGCAGTTTACTTAAGTACCCTCACACACAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCCAGCTCCTACATAGCAGTTTACTTAAGTACCCTCACACACAT  549

seq1  GCCCACATACATGCCATGTAGGCACTCACACATTCTCTCTCTCTCGCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATACATGCCATGTAGGCACTCACACATTCTCTCTCTCTCGCTCT  599

seq1  CTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTGCCTCCCCTCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTGCCTCCCCTCCC  649

seq1  TATCTATCTTTGGGGGGAAAAACAAAATTCAAGGTCAAAACTGGCCTTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTTTGGGGGGAAAAACAAAATTCAAGGTCAAAACTGGCCTTCA  699

seq1  GGGATGGAGAGCTGGCTCAGAAGTTAGGAGTGCCGGCTGCTCTCTGCTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGAGAGCTGGCTCAGAAGTTAGGAGTGCCGGCTGCTCTCTGCTCT  749

seq1  CGCAGAGGAACTGGGTTTTATTGCCAGTGTCTGCATCACAAGGCTCCTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAGGAACTGGGTTTTATTGCCAGTGTCTGCATCACAAGGCTCCTAT  799

seq1  GTGCCTAGAATTC  810
      |||||||||||||
seq2  GTGCCTAGAATTC  812