BAC Information

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BAC

Clone NameB6Ng01-305P03
Chromosome2 (Build37)
Map Location 21,961,333 - 21,962,497
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream geneLOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305P03.bB6Ng01-305P03.g
ACCGA099108GA099109
length1,1541,175
definitionB6Ng01-305P03.b B6Ng01-305P03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaacaggcatgtggcaagttaacttgtttttttgttgcttttc
ccccaggaattcaacctgtaagaatgaatatgtctcagattattttttct
taaataaaatgacaaaattgttcaaaaattatctataaaataatgcagta
ctctctggcttatttcaaataacagacttgtgtattttaaaccttatggt
ccctcctggccttaccattttctcacacttacttaaatttctattttaaa
atgatataatatttaatacataggtattaattttatattttagaatctca
tatataaatacaatgaaatgtaatcattctctctctctctctcttatttg
ttcacttgctctgaaaacccacaaagttcttagtagttactgatcttcat
atgtgtgtgggtgttggggcatcctctggaatatgagaaacctaccaatg
gttcacatcatcatcaataaagaacgagtgtctttcccactccatggcca
atcattctccaataagcattggctcttggggatcatctaccatggttatg
agaaggttttgaagggcttgttctcatgtgggtgttgtgcaggtaatagt
agctgctgttgcttcatgattgtgatggccaagccatgtccggaagcaat
cacagcgttcctcctgccccttggttcttacacatttactcccttcacat
cggtgatgttccctgagccttggaaatgatgttcatgcagctgtccagct
ggggttgagttcttattctgggtactttgacttttatatctctcctatga
ctgctgcccacttcagatcaagcttctaaccaaggctgagagcagcccat
ctatcagaataagcttaaaatgttttttaaatgttttagaactgtgtata
cctcagttagcattctcattgctgtaaagagacaccatgatgaaaggaaa
ctttagtaaaggcaaatatttaactggggttggcttaccatgtgtgatgg
tttgtatatcttgggccaggagtggcacatttggagtatggccttgtgga
atagtgtgcctgtggagtaggtatgtcactgtggtgtggccataagatcc
tcacctagttggctggcagtctattcttcactagcagcattggatgaaag
acat
gaattcacccctgagtttgattatttcctgccgtctactcctcttgggtg
aatttgcttcctttttttctagggcttttagatgtgttgtcaagctgcta
gtatgtgctgtctcccgtttcttcttggaggcactcagagctatgagttt
ccctcttagaaatgcattcattgtgtcccatcggtttgggtacgttgtgg
cttcattttcattaaactctaaaaagtctttaatttctttctttattcct
tccttgaccaaggtatcattgagaagagtgttattcagtttccacgtgaa
tgttggctttccattatttatgttgttattgaagatcagtcttaggccat
ggtggtctgataggatacatgggacaatttcaatatttttgtatctattg
aggcctgttttgtgaccaattatatggtcaattttggagaaggtcccgtg
aggtgctgagaagaaggtatatccttttgttttaggataaaatgttctgt
agatatctgtcaggtccatttgtttcataacttctgttagtttcactgtg
tccctgtttagtttctgtttccacgatctgtcctttgaagaaagtggtgt
gttgaagtctcccactattattgtgtgaggtgcaatgtatgctttgagct
ttactaaagtgtctctaatgaatgtggctgcccttgcatttggagcgtag
atattcagaattgagagttcctcttggaggattttacctttgatgagtat
gaagtgtccctccttgtcttttttgataactttgggttggaagtcgattt
tatccgatattaaaatggctactccagcttgtttcttcagtccatttgct
tggaaaattgttttccagcctttcactctgaggtagtgtctgtctttttc
cctgagatgggtttcctgtaagcagcagaatgttgggtcctgttgtgtag
ccagtctgttagtctatgtctttttattggggaattgagtccattgatat
aagagatataggaaagtaattgtgcctccctttattttgtgtagaagtgc
attctgtctgtgctgtcttcttttgcttgttgaatgattacttcctgctg
ttctagccgtgatccgtcttgaattgcttcatttccggtatatccttgga
aaggactgaactatcgtggcgatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_21961333_21962497
seq2: B6Ng01-305P03.b_46_1199

seq1  GAATTCAGAACAGGCATGTGGCAAGTTAACTTGTTTTTTTGTTGCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACAGGCATGTGGCAAGTTAACTTGTTTTTTTGTTGCTTTTC  50

seq1  CCCCAGGAATTCAACCTGTAAGAATGAATATGTCTCAGATTATTTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGAATTCAACCTGTAAGAATGAATATGTCTCAGATTATTTTTTCT  100

seq1  TAAATAAAATGACAAAATTGTTCAAAAATTATCTATAAAATAATGCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATGACAAAATTGTTCAAAAATTATCTATAAAATAATGCAGTA  150

seq1  CTCTCTGGCTTATTTCAAATAACAGACTTGTGTATTTTAAACCTTATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGCTTATTTCAAATAACAGACTTGTGTATTTTAAACCTTATGGT  200

seq1  CCCTCCTGGCCTTACCATTTTCTCACACTTACTTAAATTTCTATTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGGCCTTACCATTTTCTCACACTTACTTAAATTTCTATTTTAAA  250

seq1  ATGATATAATATTTAATACATAGGTATTAATTTTATATTTTAGAATCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAATATTTAATACATAGGTATTAATTTTATATTTTAGAATCTCA  300

seq1  TATATAAATACAATGAAATGTAATCATTCTCTCTCTCTCTCTCTTATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATACAATGAAATGTAATCATTCTCTCTCTCTCTCTCTTATTTG  350

seq1  TTCACTTGCTCTGAAAACCCACAAAGTTCTTAGTAGTTACTGATCTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGCTCTGAAAACCCACAAAGTTCTTAGTAGTTACTGATCTTCAT  400

seq1  ATGTGTGTGGGTGTTGGGGCATCCTCTGGAATATGAGAAACCTACCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGGGTGTTGGGGCATCCTCTGGAATATGAGAAACCTACCAATG  450

seq1  GTTCACATCATCATCAATAAAGAACGAGTGTCTTTCCCACTCCATGGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACATCATCATCAATAAAGAACGAGTGTCTTTCCCACTCCATGGCCA  500

seq1  ATCATTCTCCAATAAGCATTGGCTCTTGGGGATCATCTACCATGGTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTCCAATAAGCATTGGCTCTTGGGGATCATCTACCATGGTTATG  550

seq1  AGAAGGTTTTGAAGGGCTTGTTCTCATGTGGGTGTTGTGCAGGTAATAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTTTGAAGGGCTTGTTCTCATGTGGGTGTTGTGCAGGTAATAGT  600

seq1  AGCTGCTGTTGCTTCATGATTGTGATGGCCAAGCCATGTCCGGAAGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGTTGCTTCATGATTGTGATGGCCAAGCCATGTCCGGAAGCAAT  650

seq1  CACAGCGTTCCTCCTGCCCCTTGGTTCTTACACATTTACTCCCTTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCGTTCCTCCTGCCCCTTGGTTCTTACACATTTACTCCCTTCACAT  700

seq1  CGGTGATGTTCCCTGAGCCTTGGAAATGATGTTCATGCAGCTGTCCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGATGTTCCCTGAGCCTTGGAAATGATGTTCATGCAGCTGTCCAGCT  750

seq1  GGGGTTGAGTTCTTATTCTGGGTACTTTGACTTTTATATCTCTCCTATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGAGTTCTTATTCTGGGTACTTTGACTTTTATATCTCTCCTATGA  800

seq1  CTGCTGCCCACTTCAGGATCAAGCTTCTAACCAAGGCTGAGAGCAGCCCA  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCCACTTCA-GATCAAGCTTCTAACCAAGGCTGAGAGCAGCCCA  849

seq1  TCTATCAGAATAAGCTTAAAATGTTTTTTAAATGTTTTAGAACTGTGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAGAATAAGCTTAAAATGTTTTTTAAATGTTTTAGAACTGTGTAT  899

seq1  ACCTCAGTTAGCATTCTCATTGCTGTAAAGAGACACCATGATG-AAGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACCTCAGTTAGCATTCTCATTGCTGTAAAGAGACACCATGATGAAAGGAA  949

seq1  ACTTTAGTAAAGGCAAATATTTAACTGGGGTTGGCTTACCATGTGTGATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGTAAAGGCAAATATTTAACTGGGGTTGGCTTACCATGTGTGATG  999

seq1  GTTTGTATATTCTTGGGCCAGGGAGTGGCACCATTTGGAGGTATGGCCTT  1049
      ||||||||| |||||||||| ||||||||| |||||||| ||||||||||
seq2  GTTTGTATA-TCTTGGGCCA-GGAGTGGCA-CATTTGGA-GTATGGCCTT  1045

seq1  GTTGGAATAGGTGTGCCCTGGTTGGAGTAGGTATGTCACTGTGGGTGTGG  1099
      | ||||||| ||||| ||||  |||||||||||||||||||| |||||||
seq2  G-TGGAATA-GTGTG-CCTG--TGGAGTAGGTATGTCACTGT-GGTGTGG  1089

seq1  GCATAAGATCCTCACCCTAGTTGCCTGGAAGTC-ATTCTTCCACTAGCAG  1148
       ||||||||||||| |||||||| |||| |||| |||||| |||||||||
seq2  CCATAAGATCCTCA-CCTAGTTGGCTGGCAGTCTATTCTT-CACTAGCAG  1137

seq1  CATTTGGATG-AAGACAT  1165
      || ||||||| |||||||
seq2  CA-TTGGATGAAAGACAT  1154