BAC Information

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BAC

Clone NameB6Ng01-307B01
Chromosome2 (Build37)
Map Location 56,809,427 - 56,810,438
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307B01.bB6Ng01-307B01.g
ACCGA099936GA099937
length8721,024
definitionB6Ng01-307B01.b B6Ng01-307B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaactgaggactctcaaatgactgagaaacaccacaaaaaatg
tccaaagtccttggtgatcacaaaattgcaaatcaaaaccaccctgagat
tccactttacaccaagaggatcactcctccattgctggtgagattgcaaa
ctcataaaaccactctggaaatcaatctgacggttcctcagaaaattgga
aatagctctacctcaagacccaggtataccactcttgggactatacccaa
aagatatcccaccatgccacagggacatgtgttccactattttcatagca
gccgtatttgtgatagccagaagctggaaacaacctagatgttccatgac
agaagaatggaaatggaaaatgtgattcatttacacaatggaatgctact
cagctattaaaaatgaggacatcctgagttctgcaggcaaatggatggaa
ctatgaaatatcctgagtgaggtaactcatatacaaaaggacatgcatgg
tatatactcactaatatgtggatattacccaaatatatatatcccaagat
acagtctgcagaactcaaaaaggtcaacaagctgaagtcaccaaatgagg
aactccccagtctcgcttgggagggagaagaaagcaatcacaagtggaaa
aggagggagggacctaggagggaaagtggactgtacgggggccgaggggg
ggagagggacttgagccgttattgggtaagggaaaaggtctgaagccctg
aggtccagcagaaagatagaaaacaggcaaccttcaggatgtaggaggat
tgggggaacctccacaatggtgccacaaacctgggaaagtcaattaactc
tcaatgactcaaagggaggggt

gaattcttgtacatatgtgattggttgggcgaggtataacattcagagtt
actcctttggcaggaatctacaaaaacaaaaacaaaaacaaaaaacaaaa
caaaaccctttagggacagaagagattattcattatatgcaaactgaaat
ttgaattgtgatcaccaatgtaggtgtcagtagaaaagctacctagctct
gagtgcttggcactcaaggctttgtaaataatctccctgctgcatggtga
agccaagtggggaaacctcttcccccattgacagagacttccagacagac
aggggtagtcatgggcagaagagtaatatcttagtttttaggcatgtaat
aagtaaaaggacatctctagggagtaacatactaaagacccagatgcctg
gttttcttaaaaaagaaaaagaaactctagaactttgcctctaaggtatt
acaagaactttgtcagttgcacacgagaaaatagagcccatggccatata
gtaagcaaaaaaattctgtttgagtattgacatgacagtttttgaaagtt
caagcagaaaaccaattataatgagccctggaaagcctggagccctgctg
ttcaataaataaaaagtacaacaaactattttccaaaaaggttctagaga
gtttcgtcttgtcccactacttacaatctgattacataaatagtctctat
ttgccgttgaattgccaggcagctgtattaaagtacaaatcaaatcaagt
caggattagaaagtaaaagagcatggtttaaagtaatctatcccccagga
actgtgctcagattcatcaaacagagcttaaagtacagtatatctttata
ccctcgtgtttccaggctgcatggctgcgaaaaccacttatgatttttga
tatccagagaatgttgcttcttgctgaaggaggctcacttgctttatttt
aaaggtaccattcatacgtgcccgcttaatttatttacttcctttttggg
tttaggatttgttgtgcccagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56809427_56810438
seq2: B6Ng01-307B01.g_65_1088 (reverse)

seq1  CTTCT-GGCAC-ACAAATCTTAA--CCAAAA--GAAGT-AATAAA-TAAG  42
      ||||| ||||| ||||||| |||  ||||||  ||||| |||||| ||||
seq2  CTTCTGGGCACAACAAATCCTAAACCCAAAAAGGAAGTAAATAAATTAAG  50

seq1  C-GGCACGTATGAATGGTACCTTTAAA--TAAGCAAGTGAGCCTCCTTCA  89
      | |||||||||||||||||||||||||   ||||||||||||||||||||
seq2  CGGGCACGTATGAATGGTACCTTTAAAATAAAGCAAGTGAGCCTCCTTCA  100

seq1  GCAAGAAGCAACATTCTCTGGATATCAAAAATCATAAGTGGTTTTCGCAG  139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGCAACATTCTCTGGATATCAAAAATCATAAGTGGTTTTCGCAG  150

seq1  CCATGCAGCCTGGAAACACGAGGGTAT-AAGATATACTGTACTTTAAGCT  188
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCATGCAGCCTGGAAACACGAGGGTATAAAGATATACTGTACTTTAAGCT  200

seq1  CTGTTTGATGAATCTGAGCACAGTTCCTGGGGGATAGATTACTTTAAACC  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGATGAATCTGAGCACAGTTCCTGGGGGATAGATTACTTTAAACC  250

seq1  ATGCTCTTTTACTTTCTAATCCTGACTTGATTTGATTTGTACTTTAATAC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTTTACTTTCTAATCCTGACTTGATTTGATTTGTACTTTAATAC  300

seq1  AGCTGCCTGGCAATTCAACGGCAAATAGAGACTATTTATGTAATCAGATT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTGGCAATTCAACGGCAAATAGAGACTATTTATGTAATCAGATT  350

seq1  GTAAGTAGTGGGACAAGACGAAACTCTCTAGAACCTTTTTGGAAAATAGT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAGTGGGACAAGACGAAACTCTCTAGAACCTTTTTGGAAAATAGT  400

seq1  TTGTTGTACTTTTTATTTATTGAACAGCAGGGCTCCAGGCTTTCCAGGGC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTACTTTTTATTTATTGAACAGCAGGGCTCCAGGCTTTCCAGGGC  450

seq1  TCATTATAATTGGTTTTCTGCTTGAACTTTCAAAAACTGTCATGTCAATA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAATTGGTTTTCTGCTTGAACTTTCAAAAACTGTCATGTCAATA  500

seq1  CTCAAACAGAATTTTTTTGCTTACTATATGGCCATGGGCTCTATTTTCTC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACAGAATTTTTTTGCTTACTATATGGCCATGGGCTCTATTTTCTC  550

seq1  GTGTGCAACTGACAAAGTTCTTGTAATACCTTAGAGGCAAAGTTCTAGAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCAACTGACAAAGTTCTTGTAATACCTTAGAGGCAAAGTTCTAGAG  600

seq1  TTTCTTTTTCTTTTTTAAGAAAACCAGGCATCTGGGTCTTTAGTATGTTA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCTTTTTTAAGAAAACCAGGCATCTGGGTCTTTAGTATGTTA  650

seq1  CTCCCTAGAGATGTCCTTTTACTTATTACATGCCTAAAAACTAAGATATT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGAGATGTCCTTTTACTTATTACATGCCTAAAAACTAAGATATT  700

seq1  ACTCTTCTGCCCATGACTACCCCTGTCTGTCTGGAAGTCTCTGTCAATGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGCCCATGACTACCCCTGTCTGTCTGGAAGTCTCTGTCAATGG  750

seq1  GGGAAGAGGTTTCCCCACTTGGCTTCACCATGCAGCAGGGAGATTATTTA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGGTTTCCCCACTTGGCTTCACCATGCAGCAGGGAGATTATTTA  800

seq1  CAAAGCCTTGAGTGCCAAGCACTCAGAGCTAGGTAGCTTTTCTACTGACA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTTGAGTGCCAAGCACTCAGAGCTAGGTAGCTTTTCTACTGACA  850

seq1  CCTACATTGGTGATCACAATTCAAATTTCAGTTTGCATATAATGAATAAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTGGTGATCACAATTCAAATTTCAGTTTGCATATAATGAATAAT  900

seq1  CTCTTCTGTCCCTAAAGGGTTTTGTTTTGTTTTTTGTTTTTGTTTTTGTT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGTCCCTAAAGGGTTTTGTTTTGTTTTTTGTTTTTGTTTTTGTT  950

seq1  TTTGTAGATTCCTGCCAAAGGAGTAACTCTGAATGTTATACCTCGCCCAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGATTCCTGCCAAAGGAGTAACTCTGAATGTTATACCTCGCCCAA  1000

seq1  CCAATCACATATGTACAAGAATTC  1012
      ||||||||||||||||||||||||
seq2  CCAATCACATATGTACAAGAATTC  1024


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