BAC Information

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BAC

Clone NameB6Ng01-307H06
Chromosome2 (Build37)
Map Location 86,136,918 - 86,138,069
singlet/doubletsinglet
Overlap geneOlfr1052
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992
Downstream geneOlfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307H06.bB6Ng01-307H06.g
ACCGA100222GA100223
length1,1991,160
definitionB6Ng01-307H06.b B6Ng01-307H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattagaataaaccttgtacactaagtgcaaagtatatataaggt
ttatactttgaaaattgtccaatttcttttttaaattatttgagtttatt
tatttttattttgcattttttttaacagatcagattatattcccccctgc
cccggtctgctctcgactggttcccatcccacacttcctcaccctgtccc
cacctcgaagagaatgcccctactctcccaacccaaccctaacaggcatc
ctcactccctggggcctcaagtctatggagggttgggtgcattttctctt
gctgaggctagaccatgcagtactcttctccacatgtgtcagggacatta
tatcaactggtgtatcctgcctggtttgtagctcagtgtctgagaggttt
caggggtccaggtcagttgagactgctgcttttcccatggggccaaccta
ctcctcagcttcttccagccttttagctaatttaggggtctctagtctat
tggttgggtgctagtgccacagaccctcttgggtcccttgtctgggtagg
acgagtctctgggtagagataggcaaggagtcagcgaatgacagacagat
gcacaaagaagattgtgtagaatctgaatgtattgtcataaagtatatat
actacagaaaataaagggagtaggatgtcacagcaggcaaagtacatcga
agttacctgacacaaaacaaaggaatgacttcaaaaggacttataggaac
caggtaaatgtttacagtaaagataaagcctagggtcagcttaatgacat
gtaaggattttacaccctagtcacaattagtgctactcctttgagccttg
tgaaagctagcaccagggggttctgctctagcagaccttctcatgaataa
cgcaatatcacaacctccctatttcctaggccctgacaaattcttgtatg
agtataacttttaagtatctgtggagaatctccatttgacagaagaattt
caccaacttgctttctaatatgcaatgtagcctgtactgaatgtttctat
ctcattggaattcctagctctttcatggataacccacctattaagctagg
ccaatttgtgtattcctttatttggatgagacctgactgctgtcccagtt
aaccctcttgcagaactagcccgtggagcgtggctctctgtgctcttct
gaattcatgagcagcttttaccttaagattattgatagcatccaatttct
ggatatcaaacagcctcctactagatcgtggcaggtcaccaaataccagt
ttaatcaaggaaggaagaatgaaaaggaacagaaaatacataaaatgaat
ggtaagtactaagaataattgcagaaatgacatcacgaggtgcttacacc
aaagaagcaggccttggctcctctcagtactcatactggggcccacaaga
ggccattgcctcacactctgaaacacaatactcccagcaggtttttcttc
tttgtcattaggggttccaggcatcttgagcataatgtggggtatcacca
acacagaatgagatccttcctgtttagttgactgcaagtctgctttgcct
tccgatggttattgccaatatgtgtatgtcactattgtacattttttact
ctctttgtcatgctgaacagtgttgtggatcatagatgtcacagctatat
cagactattgattgcttctgttcttaggaacttaaagagaatttctagta
gtattgaaactagaccagaaaagaaaggttttagaataataggtgaagct
tatcctgcatcccaagtgtgtgatgtcctcattagcagtgccttacctcc
aacctcttagaggcagtaaagaggaacagcagtagtctctatttttactt
tttttggaatttttggtggacaaccataatcaaaaggacatttctcatgc
ttagaactaggagttttattagtaaacagttcttatggggaccattgtca
gaaaggaggaaatattatatttttcaaaaatgtaggtaagtataaaataa
tatggtttcttgaggtttaatcagaaaaccttgtagctattatttgacta
tcctccatccttcccattctgtatatcaatgaaccaatatttatttgtta
tttatttgtattaaacatatgatatctctgcttgaatttaataaacacca
agttctttttatactctaaaccttgtctttcctcctcagtttgaaagaag
gtaatgcttactgagactgttacagttggtaactgaagttcattctcttt
taggactgaacctgatccgtgaccttgatgaaaatgtatgccctctttgg
tttatattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86136918_86138069
seq2: B6Ng01-307H06.g_65_1224

seq1  GAATTCATGAGCAGCTTTTACCTTAAGATTATTGATAGCATCCAATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGCAGCTTTTACCTTAAGATTATTGATAGCATCCAATTTCT  50

seq1  GGATATCAAACAGCCTCCTACTAGATCGTGGCAGGTCACCAAATACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAAACAGCCTCCTACTAGATCGTGGCAGGTCACCAAATACCAGT  100

seq1  TTAATCAAGGAAGGAAGAATGAAAAGGAACAGAAAATACATAAAATGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAAGGAAGGAAGAATGAAAAGGAACAGAAAATACATAAAATGAAT  150

seq1  GGTAAGTACTAAGAATAATTGCAGAAATGACATCACGAGGTGCTTACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTACTAAGAATAATTGCAGAAATGACATCACGAGGTGCTTACACC  200

seq1  AAAGAAGCAGGCCTTGGCTCCTCTCAGTACTCATACTGGGGCCCACAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCAGGCCTTGGCTCCTCTCAGTACTCATACTGGGGCCCACAAGA  250

seq1  GGCCATTGCCTCACACTCTGAAACACAATACTCCCAGCAGGTTTTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTGCCTCACACTCTGAAACACAATACTCCCAGCAGGTTTTTCTTC  300

seq1  TTTGTCATTAGGGGTTCCAGGCATCTTGAGCATAATGTGGGGTATCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATTAGGGGTTCCAGGCATCTTGAGCATAATGTGGGGTATCACCA  350

seq1  ACACAGAATGAGATCCTTCCTGTTTAGTTGACTGCAAGTCTGCTTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAATGAGATCCTTCCTGTTTAGTTGACTGCAAGTCTGCTTTGCCT  400

seq1  TCCGATGGTTATTGCCAATATGTGTATGTCACTATTGTACATTTTTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGGTTATTGCCAATATGTGTATGTCACTATTGTACATTTTTTACT  450

seq1  CTCTTTGTCATGCTGAACAGTGTTGTGGATCATAGATGTCACAGCTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTCATGCTGAACAGTGTTGTGGATCATAGATGTCACAGCTATAT  500

seq1  CAGACTATTGATTGCTTCTGTTCTTAGGAACTTAAAGAGAATTTCTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATTGATTGCTTCTGTTCTTAGGAACTTAAAGAGAATTTCTAGTA  550

seq1  GTATTGAAACTAGACCAGAAAAGAAAGGTTTTAGAATAATAGGTGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAAACTAGACCAGAAAAGAAAGGTTTTAGAATAATAGGTGAAGCT  600

seq1  TATCCTGCATCCCAAGTGTGTGATGTCCTCATTAGCAGTGCCTTACCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCATCCCAAGTGTGTGATGTCCTCATTAGCAGTGCCTTACCTCC  650

seq1  AACCTCTTAGAGGCAGTAAAGAGGAACAGCAGTAGTCTCTATTTTTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTTAGAGGCAGTAAAGAGGAACAGCAGTAGTCTCTATTTTTACTT  700

seq1  TTTTTGGAATTTTTGGTGGACAACCATAATCAAAAGGACATTTCTCATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAATTTTTGGTGGACAACCATAATCAAAAGGACATTTCTCATGC  750

seq1  TTAGAACTAGGAGTTTTATTAGTAAACAGTTCTTATGGGGACCATTGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACTAGGAGTTTTATTAGTAAACAGTTCTTATGGGGACCATTGTCA  800

seq1  GAAAGGAGGAAATATTATATTTTTCAAAAATGTAGGTAAGTATAAAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGGAAATATTATATTTTTCAAAAATGTAGGTAAGTATAAAATAA  850

seq1  TATGGTTTCTTGAGGTTTAATCAGAAAACCTTGTAGCTATTATTTGACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTCTTGAGGTTTAATCAGAAAACCTTGTAGCTATTATTTGACTA  900

seq1  TCCTCCATCCTTCCCATTCTGTATATCAATGAACCAATATTTATTTGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATCCTTCCCATTCTGTATATCAATGAACCAATATTTATTTGTTA  950

seq1  TTTATTTGTATTAAAACATATGATATCTCTGCTTGAATTTAATAAACACC  1000
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTATT-AAACATATGATATCTCTGCTTGAATTTAATAAACACC  999

seq1  AAGTTCTTTTTATACTCTAAACCCTTGTCTTTCCCTCCTCAGGTTTGAAA  1050
      ||||||||||||||||||||| |||||||||| |||||||| ||||||||
seq2  AAGTTCTTTTTATACTCTAAA-CCTTGTCTTT-CCTCCTCA-GTTTGAAA  1046

seq1  GAAGGGAATGGCTACTGAGAACTG-TACAGTT-GTTACTG-AGTTCAT--  1095
      ||||| ||||  ||||||| |||| ||||||| || |||| |||||||  
seq2  GAAGGTAATGCTTACTGAG-ACTGTTACAGTTGGTAACTGAAGTTCATTC  1095

seq1  TCTTTTAGGACTGA--CTGAT-CGTG--CTGAATTGAAAATG-ATG--CT  1137
      ||||||||||||||  ||||| ||||  ||  | |||||||| |||  ||
seq2  TCTTTTAGGACTGAACCTGATCCGTGACCTTGA-TGAAAATGTATGCCCT  1144

seq1  CTTTGTTTTAT-TTCT  1152
      ||||| ||||| ||||
seq2  CTTTGGTTTATATTCT  1160