BAC Information

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BAC

Clone NameB6Ng01-308B24
Chromosome2 (Build37)
Map Location 57,739,133 - 57,739,857
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
Downstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1, LOC674940, Upp2, BC062650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308B24.bB6Ng01-308B24.g
ACCGA100707GA100708
length987725
definitionB6Ng01-308B24.b B6Ng01-308B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagccaagccca
tatttttaacaatatcttttcatgactacataagtgtccacagtccacaa
agggtgataggacccttctctgcctcactttttttcctgatcctcacaaa
catccttagcattcacagcttatattgacatcttcaacacaagcaatcca
ggtgtttctatcatgattgcccaaatttccaccagactaggccttctatt
aatagctacaggcttattacacaaaattcactttttt
gaattcaatctcgtccctgcaaaaagaaatgaataagaaaagggtgatta
ttctatgtttaagtggtacccagtacccatggctacttagcatagttaag
cagaagaactttcatttgcctgcttcctagaggaaagtggaaatgagttc
aggacttcctgtttacaggtttcctaaagaagtacaagttcatatgataa
attatctatgcgggcctagggcaaaagctcacactcctaattctagaact
tagttaagcaaatgcaggcagagctctgcgaatttaaggctagccaaagc
tacacagttaagactgtctcaaaaactttctccagagaagataagtggat
ttgctaaagtgatgtggaaacagattgatgttaaaaggtatcataagaca
ctgatcagtatttctcataacatctgtgtttgcctatcaatccacaagcc
cctgatcaagaaagattagaaactgttcactgggcagtaggttgcagata
tgaatggagacaccgcagatgcaaaataaagacagcacatagtgaactat
aggaaaagactggataatttcagtgtgctgcctaccagtcaattttattc
ctttattcattaaattccatctaccactacaaataaaagatgttattctt
tccctttctatttaggtaaacatagtccccccctttctctctctctctct
ctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57739133_57739857
seq2: B6Ng01-308B24.g_66_790

seq1  GAATTCAATCTCGTCCCTGCAAAAAGAAATGAATAAGAAAAGGGTGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTCGTCCCTGCAAAAAGAAATGAATAAGAAAAGGGTGATTA  50

seq1  TTCTATGTTTAAGTGGTACCCAGTACCCATGGCTACTTAGCATAGTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTTAAGTGGTACCCAGTACCCATGGCTACTTAGCATAGTTAAG  100

seq1  CAGAAGAACTTTCATTTGCCTGCTTCCTAGAGGAAAGTGGAAATGAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAACTTTCATTTGCCTGCTTCCTAGAGGAAAGTGGAAATGAGTTC  150

seq1  AGGACTTCCTGTTTACAGGTTTCCTAAAGAAGTACAAGTTCATATGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCCTGTTTACAGGTTTCCTAAAGAAGTACAAGTTCATATGATAA  200

seq1  ATTATCTATGCGGGCCTAGGGCAAAAGCTCACACTCCTAATTCTAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTATGCGGGCCTAGGGCAAAAGCTCACACTCCTAATTCTAGAACT  250

seq1  TAGTTAAGCAAATGCAGGCAGAGCTCTGCGAATTTAAGGCTAGCCAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGCAAATGCAGGCAGAGCTCTGCGAATTTAAGGCTAGCCAAAGC  300

seq1  TACACAGTTAAGACTGTCTCAAAAACTTTCTCCAGAGAAGATAAGTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTTAAGACTGTCTCAAAAACTTTCTCCAGAGAAGATAAGTGGAT  350

seq1  TTGCTAAAGTGATGTGGAAACAGATTGATGTTAAAAGGTATCATAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAAGTGATGTGGAAACAGATTGATGTTAAAAGGTATCATAAGACA  400

seq1  CTGATCAGTATTTCTCATAACATCTGTGTTTGCCTATCAATCCACAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGTATTTCTCATAACATCTGTGTTTGCCTATCAATCCACAAGCC  450

seq1  CCTGATCAAGAAAGATTAGAAACTGTTCACTGGGCAGTAGGTTGCAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCAAGAAAGATTAGAAACTGTTCACTGGGCAGTAGGTTGCAGATA  500

seq1  TGAATGGAGACACCGCAGATGCAAAATAAAGACAGCACATAGTGAACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGAGACACCGCAGATGCAAAATAAAGACAGCACATAGTGAACTAT  550

seq1  AGGAAAAGACTGGATAATTTCAGTGTGCTGCCTACCAGTCAATTTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGACTGGATAATTTCAGTGTGCTGCCTACCAGTCAATTTTATTC  600

seq1  CTTTATTCATTAAATTCCATCTACCACTACAAATAAAAGATGTTATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCATTAAATTCCATCTACCACTACAAATAAAAGATGTTATTCTT  650

seq1  TCCCTTTCTATTTAGGTAAACATAGTCCCCCCCTTTCTCTCTCTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTATTTAGGTAAACATAGTCCCCCCCTTTCTCTCTCTCTCTCT  700

seq1  CTCTCTCTCTCTCTCTCTCTCTCTC  725
      |||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTC  725