BAC Information

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BAC

Clone NameB6Ng01-309A24
Chromosome2 (Build37)
Map Location 40,546,931 - 40,547,604
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309A24.bB6Ng01-309A24.g
ACCGA101396GA101397
length9841,183
definitionB6Ng01-309A24.b B6Ng01-309A24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcattaaaactgcctgattatcggcttttgttgatttggtgac
ttattttctctaatgtgtgtttttgtcaagtatcacttcattgtagtcaa
gtacactaaaggattgttttggctatcctgggtcaattgtttattatgaa
tttcgagatttgttttattttttatgtattagaattttcaacttcttttg
ttccatctctgcatctccttttaaaatccaacttgagcatgacagatgat
ctttttggtatattcctatattttgcttacaagtattttactgaggattt
tttaattgaggtttgtggtttgaatatgcttgaatgagggagtggcacta
ctaggagatgttggagtatgtgtggcctagttagagaaagtctatcactg
tgggtgtgggctttaagtccctcctcctagccatatgtgaaaaagtcttc
tcctggctgccttctgatcaagatggataactctcagctcctccaaggct
agcatgcctggatgctgccataattcccactttgatgattgtggacagaa
cttttgaatctgtaagccagccccaatttaaaattctcctttataagagt
tggcttagtcatgatgtctctgcacagcaaaggaaatcccagctaagata
atgctcatcaggaaaattgtgctatagttctgtctgtctctctgtgtctc
tctacgactatgtctgtgtctatctgtctgtctgtctgtctgtctgtctg
tctgtctctttctctctctctttttctctccctgtgtgtgtggtgtattt
cttaatctggtttttggtattagagtattattgacttcataggaatctcg
gtgtgtttcttcttttttctattaatagaaaaaattttaaagtatgtttt
ttctgaaggtcttttataatttcatttaaaaagcatttttgctttgaagt
ctttctaaatttttctgtgattccatatggagct

gaattctgttacaatcaggatcacaggaggggcaggttccagtcagaaac
agcaagggaaggtagtactagatataaccagatggcaagaagcaagtgta
agaatataagaaacagaaaccaaggttatttggcatcatcacccagtcct
cctactaaaggaagtcctggatagaccaacacacctgaaaagcaaaatta
gcatttaaaatcatatctcatgatgataatagaggactgtaagaagaaca
taaataactcccttcaagaaatacaggagcatacaggtaaagaggtagaa
gcccttaaagaggacacacaaaaaaccttttagaaagttacaggaaaaca
cagccaaacaggtgtaggaattgaacaaaaccacttagggtctaaaagtg
aaaatagatatcataaagaaagcaaaatgggggcaatcctggagatagaa
aacctaggagagagagcaggagtcatacatacaagcatcaccaacagata
gattgagagaaaaatctcagatgcagaagataccatagaaaacattgaca
cagcagtccaagaacatgcagaatgcaaaaagctcctaacccaaaacatc
taggaaatccaggaaacagtgagaaaaccaaacataaggataataggtaa
agaagagagtgaagatttccaacttaaagggccagaaaatatcttctaca
aaagtattgaagaaaatttacttaacttaaagaaagagattcccatgaac
atacaagaagcataaggaactcaaaatatgctgaaccagaaaataaagtc
ctcctgacacataacaaacaaaataccaaatgcccaaaacaaaacaaaac
aaaagaatattaaaagcaataaagggaaaaaggtcaaataacgtataaag
acagacctatcagaattacatcagactgctcagcagagattataaaaagc
cagaaaaatcctggacagatgtcacacagatcctaaaagaacaacaaaat
gccatcccaggctctatcccagcaaaacttcccaattaacacagaataga
agaaaccaagaatatttcataacaaaaaaaaaatgattataaatatttcc
acaatatcaagccttacggaatatagattgcaactcaaccaaggagggta
acctgcctctcttagaaaaaaaggttgcaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40546931_40547604
seq2: B6Ng01-309A24.b_44_717 (reverse)

seq1  TAGCACAATTTTCCTGATGAGCATTATCTTAGCTGGGATTTCCTTTGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAATTTTCCTGATGAGCATTATCTTAGCTGGGATTTCCTTTGCTG  50

seq1  TGCAGAGACATCATGACTAAGCCAACTCTTATAAAGGAGAATTTTAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGACATCATGACTAAGCCAACTCTTATAAAGGAGAATTTTAAATT  100

seq1  GGGGCTGGCTTACAGATTCAAAAGTTCTGTCCACAATCATCAAAGTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGCTTACAGATTCAAAAGTTCTGTCCACAATCATCAAAGTGGGA  150

seq1  ATTATGGCAGCATCCAGGCATGCTAGCCTTGGAGGAGCTGAGAGTTATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGCAGCATCCAGGCATGCTAGCCTTGGAGGAGCTGAGAGTTATCC  200

seq1  ATCTTGATCAGAAGGCAGCCAGGAGAAGACTTTTTCACATATGGCTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATCAGAAGGCAGCCAGGAGAAGACTTTTTCACATATGGCTAGGA  250

seq1  GGAGGGACTTAAAGCCCACACCCACAGTGATAGACTTTCTCTAACTAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGACTTAAAGCCCACACCCACAGTGATAGACTTTCTCTAACTAGGC  300

seq1  CACACATACTCCAACATCTCCTAGTAGTGCCACTCCCTCATTCAAGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATACTCCAACATCTCCTAGTAGTGCCACTCCCTCATTCAAGCATA  350

seq1  TTCAAACCACAAACCTCAATTAAAAAATCCTCAGTAAAATACTTGTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCACAAACCTCAATTAAAAAATCCTCAGTAAAATACTTGTAAGC  400

seq1  AAAATATAGGAATATACCAAAAAGATCATCTGTCATGCTCAAGTTGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAGGAATATACCAAAAAGATCATCTGTCATGCTCAAGTTGGATT  450

seq1  TTAAAAGGAGATGCAGAGATGGAACAAAAGAAGTTGAAAATTCTAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGAGATGCAGAGATGGAACAAAAGAAGTTGAAAATTCTAATACA  500

seq1  TAAAAAATAAAACAAATCTCGAAATTCATAATAAACAATTGACCCAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAAACAAATCTCGAAATTCATAATAAACAATTGACCCAGGAT  550

seq1  AGCCAAAACAATCCTTTAGTGTACTTGACTACAATGAAGTGATACTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAACAATCCTTTAGTGTACTTGACTACAATGAAGTGATACTTGAC  600

seq1  AAAAACACACATTAGAGAAAATAAGTCACCAAATCAACAAAAGCCGATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACACATTAGAGAAAATAAGTCACCAAATCAACAAAAGCCGATAA  650

seq1  TCAGGCAGTTTTAATGAAGAATTC  674
      ||||||||||||||||||||||||
seq2  TCAGGCAGTTTTAATGAAGAATTC  674


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