BAC Information

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BAC

Clone NameB6Ng01-309G21
Chromosome2 (Build37)
Map Location 43,218,665 - 43,219,808
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC100041228
Downstream geneLOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309G21.bB6Ng01-309G21.g
ACCGA101673GA101674
length1,1441,137
definitionB6Ng01-309G21.b B6Ng01-309G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcaccattgttcaac
atccttaatcatcagggaaatgcaaatcaaaacaaccttgagattccacc
tcacaccagtcagaatggctaagatcaaaaatgcaggtgacagcagatgc
tggcgaggatgtggagaaagaggaacactcctccattgttggtgggagtg
caggcttgtacaaccactctggaaatcagtctggcggttcctcagaaaat
tggacatagtactaccggaggatacagcaatacctctcctgggcatatat
ccagaagatgccccaactggtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatctacacaatggagtac
tactcagctattaaaaagaatgaatttatgaaattcctaggcaaatggat
ggacctggagggcatcatcctgagtgaggtaacacattcacaaaggaact
cacacaatatgtactcactgataagtggatattagccccaaacctaggat
acccaagatataagatacaatttggtaaacacatgaaactcaagaaaaat
gaagactgaagtgtggacactatgcccctccttagaattcgggaacaaaa
cacccatggaaggagttacaaagataaagtttggagctgagatgaaagga
tggaccatgtagagactgccatatccagggatccaccccataatcagaat
ccaaatgctgacaccattgcatacactagcaagattttattgaaaggacc
cagatgtagtttgtctcttgtgagactatgccggggccctagcaaacaca
gaagtggatgctcacagtcagctaatggatggatcacagggctcctatgg
aggagctagagaagtacccatgagctaaagggatctgcaccctatagtgg
acacaatatgactacaagtaccccgagctcttgactctagctgcaattgt
atcaaagattgctagttcgcatcactggaagaagtcaattgaacatgcaa
acttttattgtcagtacaggacctcaggacctaaaaggggagat
gaattcccttagaattcttgagtaactcctgttttgtgttcaaacacatt
ctgggacatatttaggaactacaagcaggcgactgatctagtctgttgat
ttggattgcacaaatagtcagataaactgagttctctcagtgaaggttta
ggggaaaattcctatttaccaatgatttccaattgtaattggggacaggt
gaatagaaaaggacatgcatcttaaaagatttatattgccctaacctctc
agtcaaaacagaaagtcttccaaattttctccttaacaaccaagaaccca
ttaaacaaaaagtcctaaacagggtgtaatgctcttgagcaactagctca
agaagccagctacccattgtggtgtgttctagattcctctctgagtactt
ctttctgctttgctattgatgaatgtcttgtcaactcctaggataaagcc
aagaacctgaacacagcctgaccagactcacaacagcgccttctttcttt
acctttgtgtgtgtgtgtgtttgtttttgcatgaggcttctgttggtata
ttggtataacataggtccaatttctaatcatctttgatagaagtgatttt
tttttttaatttttggtttttggtttttggagacagggtttatctgcata
gccctggctgtcctagaactcactctgtagaccagcctggcctcgaactc
agaaatccacctgtttctgcctcacaagggctgggattaaaggtgtgagc
caccactgcccagattttaatcccctggtttaccatttttaaatatctta
agggtttttttttttaattcctgcttttattggctttatcatacattgtt
gggttttggtctaccctctcccttacccctgtttctatatctccctgacc
ctgcaacttaaacttttcctcctgtcgagattcctctcatgggctcccta
aacacaacaagacacacaattacacattctttaaattacagctaaactca
catattagaagagacttatgttggagtttgcttctgcggtttaatggcag
cttctatcctgactgttatatagccagatttcagcctagaaatgggtcat
gttaagggtatggatcttttccaggaagccaatcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43218665_43219808
seq2: B6Ng01-309G21.g_66_1202

seq1  GAATTCCCTTAGAATTCTTGAGTAACTCCTGTTTTGTGTTCAAACACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAGAATTCTTGAGTAACTCCTGTTTTGTGTTCAAACACATT  50

seq1  CTGGGACATATTTAGGAACTACAAGCAGGCGACTGATCTAGTCTGTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACATATTTAGGAACTACAAGCAGGCGACTGATCTAGTCTGTTGAT  100

seq1  TTGGATTGCACAAATAGTCAGATAAACTGAGTTCTCTCAGTGAAGGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGCACAAATAGTCAGATAAACTGAGTTCTCTCAGTGAAGGTTTA  150

seq1  GGGGAAAATTCCTATTTACCAATGATTTCCAATTGTAATTGGGGACAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATTCCTATTTACCAATGATTTCCAATTGTAATTGGGGACAGGT  200

seq1  GAATAGAAAAGGACATGCATCTTAAAAGATTTATATTGCCCTAACCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAAAAGGACATGCATCTTAAAAGATTTATATTGCCCTAACCTCTC  250

seq1  AGTCAAAACAGAAAGTCTTCCAAATTTTCTCCTTAACAACCAAGAACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAACAGAAAGTCTTCCAAATTTTCTCCTTAACAACCAAGAACCCA  300

seq1  TTAAACAAAAAGTCCTAAACAGGGTGTAATGCTCTTGAGCAACTAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAAAAGTCCTAAACAGGGTGTAATGCTCTTGAGCAACTAGCTCA  350

seq1  AGAAGCCAGCTACCCATTGTGGTGTGTTCTAGATTCCTCTCTGAGTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGCTACCCATTGTGGTGTGTTCTAGATTCCTCTCTGAGTACTT  400

seq1  CTTTCTGCTTTGCTATTGATGAATGTCTTGTCAACTCCTAGGATAAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTTTGCTATTGATGAATGTCTTGTCAACTCCTAGGATAAAGCC  450

seq1  AAGAACCTGAACACAGCCTGACCAGACTCACAACAGCGCCTTCTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCTGAACACAGCCTGACCAGACTCACAACAGCGCCTTCTTTCTTT  500

seq1  ACCTTTGTGTGTGTGTGTGTTTGTTTTTGCATGAGGCTTCTGTTGGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGTGTGTGTGTGTGTTTGTTTTTGCATGAGGCTTCTGTTGGTATA  550

seq1  TTGGTATAACATAGGTCCAATTTCTAATCATCTTTGATAGAAGTGATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATAACATAGGTCCAATTTCTAATCATCTTTGATAGAAGTGATTTT  600

seq1  TTTTTTTAATTTTTGGTTTTTGGTTTTTGGAGACAGGGTTTATCTGCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTTTGGTTTTTGGTTTTTGGAGACAGGGTTTATCTGCATA  650

seq1  GCCCTGGCTGTCCTAGAACTCACTCTGTAGACCAGCCTGGCCTCGAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCTGTCCTAGAACTCACTCTGTAGACCAGCCTGGCCTCGAACTC  700

seq1  AGAAATCCACCTGTTTCTGCCTCACAAGGGCTGGGATTAAAGGTGTGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCACCTGTTTCTGCCTCACAAGGGCTGGGATTAAAGGTGTGAGC  750

seq1  CACCACTGCCCAGATTTTAATCCCCTGGTTTACCATTTTTAAATATCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGCCCAGATTTTAATCCCCTGGTTTACCATTTTTAAATATCTTA  800

seq1  AGGG-TTTTTTTTTTAATTCCTGCTTTTATTGGCTTTATCATACATTGTT  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTTTTTTTTAATTCCTGCTTTTATTGGCTTTATCATACATTGTT  850

seq1  -GGTTTTGGTCTACCCTCTCCCTTACCCCTGTTTCTATATCTCCCTGACC  898
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGGTCTACCCTCTCCCTTACCCCTGTTTCTATATCTCCCTGACC  900

seq1  CTGCAACTTAAACTTTTCCTCCTGTCGAAGATTCCTCTCATGGGCTCCCT  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGCAACTTAAACTTTTCCTCCTGTCG-AGATTCCTCTCATGGGCTCCCT  949

seq1  AAACACAAACAAGACCACACAATTACACATTCTTTAAAATTACAAGCTAA  998
      |||||| ||||||| |||||||||||||||||||| ||||||| ||||||
seq2  AAACAC-AACAAGA-CACACAATTACACATTCTTT-AAATTAC-AGCTAA  995

seq1  ACCTCACATATAAG-AGAGAC-TATG-TGGAGTTTGCCTTTCTGC-GTTT  1044
      | ||||||||| || |||||| |||| ||||||||||  |||||| ||||
seq2  A-CTCACATATTAGAAGAGACTTATGTTGGAGTTTGC--TTCTGCGGTTT  1042

seq1  ATGGGCAGCTTCCTATCTTGACTG-TATATAGCCCAGAATTCCAGCCTAG  1093
      |  |||||||| ||||| |||||| ||||||| |||| ||| ||||||||
seq2  AATGGCAGCTT-CTATCCTGACTGTTATATAG-CCAG-ATTTCAGCCTAG  1089

seq1  AAAATGGTCATGTTATGGTGATGTGAGTCTTTTCACAGGAAGCCAATCAA  1143
      |||  |||||||||| ||  ||| || ||||||| |||||||||||||||
seq2  AAATGGGTCATGTTAAGGGTATG-GA-TCTTTTC-CAGGAAGCCAATCAA  1136

seq1  A  1144
      |
seq2  A  1137