BAC Information

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BAC

Clone NameB6Ng01-309N16
Chromosome2 (Build37)
Map Location 77,216,423 - 77,351,146
singlet/doubletdoublet
Overlap geneZfp533
Upstream geneDrbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906
Downstream geneBC003993, LOC667920, OTTMUSG00000016703
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309N16.bB6Ng01-309N16.g
ACCGA101992GA101993
length7711,092
definitionB6Ng01-309N16.b B6Ng01-309N16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,216,423 - 77,217,193)(77,350,048 - 77,351,146)
sequence
gaattcacccagggcaggaacctggaggcaggaacgcatgcaaagaccat
ggaagagtgctacttactggtttgctcttcatggcttgcttggccttctt
tcttacagaatccctaaccaccagcccagggacggcaacccgtacaatgg
gctgggtcatcaccatcaatcactaattaagaaaatgctttacaagcaaa
tcttatggagacattgcctcaactgagtctccctcttctctgatgtctta
ctttctgccaagttgacataaacccagccagcacaccgaatttagaagtt
ctcaagttggatcaggttgaccaggctggttacacctcttcttacttgat
ttttaaggttgcatgatgaagtcttgtccataggtctgcttttttttcta
tagtctctcaatgggtgatttcatactatgcctactaatcagagctccat
ctctctctacccctgtcttcttagctctaggtatatctatccagtgtctc
gtctgtcacattcagtaggcatctgacaacttctgaaggtttcctatctc
caaaccctataggctacatgcacactttgattgctcagtctccccagctc
cctgcagctcattctttttcaagtgctagtagacctggcttccaaatcta
gccaaacatagccacttttcctgggtcccattggtgtctagtgcaaatat
ataccctgtctcactgagatgcaccctaatccagacagcagacactgttg
tattgtcctttttttttttgg
gaattcagtacatgggccagagagtcagagagaaatcaatcgctacctgg
ctgtgtgtacactgctgccacagcgtgagaaacaccatcttcctgatgaa
ttcatcattttgtataaaagctctgcattactggtaaactgaaggacatc
atgacttgccatccatcacggctccaccactgctttctcacgcagaacct
cagtgcttgcacgccagacagagcggggagcttccgtggggtcctttgtg
tacacagcattgccccaggcttcttcagtggcagatgctggggaagctct
ctgcaggcttcggggcacagggaacctcacaagtatctgtaactcctctt
ccaaggaatctaatgtcttctgtcccacacccccatatatacaaggtaca
tatagggtacatatatttacatacacacaagcaaaacagttccacatagt
aaatagaataatctttttaaaaaatcgtatagccttacacttccagatac
acactagtcccttaggcatctctgacatcagtcccttctttggtaaggcc
agtgaagaagcgccaacatcacggaatgaccattaactgacaggtcactc
agagcacgatcaagccaaccatggaaaagggaactcagatctcaccaaac
acactgtaataataaagacaccacttggaaacgtcctttttaacggagcg
atttttctttttctttcttcttttttttaaaaataatttaatcttatttt
atgtgcattgattttatgtgcattggcatgaaagtttcagagcttccaga
actgtacttacagactgctgtgagctaccatgtggttgctgggaattgaa
cccaagtcctctggaaggcaaccagtactcacaaccacagaactatctct
caagcccctaggttttttttttcttatttttgcaatgttttcttaagagc
actgatcctgtttctagaaaacagctgtaatgtatacagaaaggcaccct
gggacccctgttgcaatgggcagcacacagacttcacaaagagcatcttc
tctggtagatgtgaaaacagcataacaggtatacttgccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_77216423_77217193
seq2: B6Ng01-309N16.b_45_815

seq1  GAATTCACCCAGGGCAGGAACCTGGAGGCAGGAACGCATGCAAAGACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCAGGGCAGGAACCTGGAGGCAGGAACGCATGCAAAGACCAT  50

seq1  GGAAGAGTGCTACTTACTGGTTTGCTCTTCATGGCTTGCTTGGCCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTGCTACTTACTGGTTTGCTCTTCATGGCTTGCTTGGCCTTCTT  100

seq1  TCTTACAGAATCCCTAACCACCAGCCCAGGGACGGCAACCCGTACAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAGAATCCCTAACCACCAGCCCAGGGACGGCAACCCGTACAATGG  150

seq1  GCTGGGTCATCACCATCAATCACTAATTAAGAAAATGCTTTACAAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTCATCACCATCAATCACTAATTAAGAAAATGCTTTACAAGCAAA  200

seq1  TCTTATGGAGACATTGCCTCAACTGAGTCTCCCTCTTCTCTGATGTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGGAGACATTGCCTCAACTGAGTCTCCCTCTTCTCTGATGTCTTA  250

seq1  CTTTCTGCCAAGTTGACATAAACCCAGCCAGCACACCGAATTTAGAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCCAAGTTGACATAAACCCAGCCAGCACACCGAATTTAGAAGTT  300

seq1  CTCAAGTTGGATCAGGTTGACCAGGCTGGTTACACCTCTTCTTACTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTGGATCAGGTTGACCAGGCTGGTTACACCTCTTCTTACTTGAT  350

seq1  TTTTAAGGTTGCATGATGAAGTCTTGTCCATAGGTCTGCTTTTTTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGTTGCATGATGAAGTCTTGTCCATAGGTCTGCTTTTTTTTCTA  400

seq1  TAGTCTCTCAATGGGTGATTTCATACTATGCCTACTAATCAGAGCTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTCAATGGGTGATTTCATACTATGCCTACTAATCAGAGCTCCAT  450

seq1  CTCTCTCTACCCCTGTCTTCTTAGCTCTAGGTATATCTATCCAGTGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTACCCCTGTCTTCTTAGCTCTAGGTATATCTATCCAGTGTCTC  500

seq1  GTCTGTCACATTCAGTAGGCATCTGACAACTTCTGAAGGTTTCCTATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCACATTCAGTAGGCATCTGACAACTTCTGAAGGTTTCCTATCTC  550

seq1  CAAACCCTATAGGCTACATGCACACTTTGATTGCTCAGTCTCCCCAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTATAGGCTACATGCACACTTTGATTGCTCAGTCTCCCCAGCTC  600

seq1  CCTGCAGCTCATTCTTTTTCAAGTGCTAGTAGACCTGGCTTCCAAATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCTCATTCTTTTTCAAGTGCTAGTAGACCTGGCTTCCAAATCTA  650

seq1  GCCAAACATAGCCACTTTTCCTGGGTCCCATTGGTGTCTAGTGCAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACATAGCCACTTTTCCTGGGTCCCATTGGTGTCTAGTGCAAATAT  700

seq1  ATACCCTGTCTCACTGAGATGCACCCTAATCCAGACAGCAGACACTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTGTCTCACTGAGATGCACCCTAATCCAGACAGCAGACACTGTTG  750

seq1  TATTGTCCTTTTTTTTTTGGG  771
      |||||||||||||||||| ||
seq2  TATTGTCCTTTTTTTTTTTGG  771

seq1: chr2_77350048_77351146
seq2: B6Ng01-309N16.g_68_1159 (reverse)

seq1  GAGGGCCAGGTATA-CTGTTATGCTGTTTTTCACATTCCTA-CAGAGAAG  48
      ||||| || ||||| ||||||||||| |||||||||  ||| ||||||||
seq2  GAGGG-CAAGTATACCTGTTATGCTG-TTTTCACAT--CTACCAGAGAAG  46

seq1  ATGCCTCTTTGTGAAGTCCTGTGTGCTGGCCCATTGCACCAGGGGGTCCC  98
      ||| ||||||||||||| ||||||||| |||||||||| || ||||||||
seq2  ATG-CTCTTTGTGAAGT-CTGTGTGCT-GCCCATTGCAACA-GGGGTCCC  92

seq1  AGGGTGCCTTTCTGTATACATTAACAGCTG-TTTCTAGAAACAGGATCAG  147
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  AGGGTGCCTTTCTGTATACATT-ACAGCTGTTTTCTAGAAACAGGATCAG  141

seq1  TGCTCTTAAGAAAACATTTGCAAAAATAAG-AAAAAAAAACCTAGGGGCT  196
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  TGCTCTTAAGAAAACA-TTGCAAAAATAAGAAAAAAAAAACCTAGGGGCT  190

seq1  TGAGAGATAGTTCTGTGGTTGTGAGTACTGGTTGCCCTTCCAGAGGACTT  246
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGAGAGATAGTTCTGTGGTTGTGAGTACTGGTTG-CCTTCCAGAGGACTT  239

seq1  GGGTTCAATTCCCAGCAACCACATGGTAGCTCACAGCAGTCTGTAAGTAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCAATTCCCAGCAACCACATGGTAGCTCACAGCAGTCTGTAAGTAC  289

seq1  AGTTCTGGAAGCTCTGAAACTTTCATGCCAATGCACATAAAATCAATGCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGAAGCTCTGAAACTTTCATGCCAATGCACATAAAATCAATGCA  339

seq1  CATAAAATAAGATTAAATTATTTTTAAAAAAAAGAAGAAAGAAAAAGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATAAGATTAAATTATTTTTAAAAAAAAGAAGAAAGAAAAAGAAA  389

seq1  AATCGCTCCGTTAAAAAGGACGTTTCCAAGTGGTGTCTTTATTATTACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCTCCGTTAAAAAGGACGTTTCCAAGTGGTGTCTTTATTATTACAG  439

seq1  TGTGTTTGGTGAGATCTGAGTTCCCTTTTCCATGGTTGGCTTGATCGTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGGTGAGATCTGAGTTCCCTTTTCCATGGTTGGCTTGATCGTGC  489

seq1  TCTGAGTGACCTGTCAGTTAATGGTCATTCCGTGATGTTGGCGCTTCTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGACCTGTCAGTTAATGGTCATTCCGTGATGTTGGCGCTTCTTC  539

seq1  ACTGGCCTTACCAAAGAAGGGACTGATGTCAGAGATGCCTAAGGGACTAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTACCAAAGAAGGGACTGATGTCAGAGATGCCTAAGGGACTAG  589

seq1  TGTGTATCTGGAAGTGTAAGGCTATACGATTTTTTAAAAAGATTATTCTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCTGGAAGTGTAAGGCTATACGATTTTTTAAAAAGATTATTCTA  639

seq1  TTTACTATGTGGAACTGTTTTGCTTGTGTGTATGTAAATATATGTACCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATGTGGAACTGTTTTGCTTGTGTGTATGTAAATATATGTACCCT  689

seq1  ATATGTACCTTGTATATATGGGGGTGTGGGACAGAAGACATTAGATTCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACCTTGTATATATGGGGGTGTGGGACAGAAGACATTAGATTCCT  739

seq1  TGGAAGAGGAGTTACAGATACTTGTGAGGTTCCCTGTGCCCCGAAGCCTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGGAGTTACAGATACTTGTGAGGTTCCCTGTGCCCCGAAGCCTG  789

seq1  CAGAGAGCTTCCCCAGCATCTGCCACTGAAGAAGCCTGGGGCAATGCTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCTTCCCCAGCATCTGCCACTGAAGAAGCCTGGGGCAATGCTGT  839

seq1  GTACACAAAGGACCCCACGGAAGCTCCCCGCTCTGTCTGGCGTGCAAGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAAAGGACCCCACGGAAGCTCCCCGCTCTGTCTGGCGTGCAAGCA  889

seq1  CTGAGGTTCTGCGTGAGAAAGCAGTGGTGGAGCCGTGATGGATGGCAAGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTCTGCGTGAGAAAGCAGTGGTGGAGCCGTGATGGATGGCAAGT  939

seq1  CATGATGTCCTTCAGTTTACCAGTAATGCAGAGCTTTTATACAAAATGAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTCCTTCAGTTTACCAGTAATGCAGAGCTTTTATACAAAATGAT  989

seq1  GAATTCATCAGGAAGATGGTGTTTCTCACGCTGTGGCAGCAGTGTACACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGGAAGATGGTGTTTCTCACGCTGTGGCAGCAGTGTACACA  1039

seq1  CAGCCAGGTAGCGATTGATTTCTCTCTGACTCTCTGGCCCATGTACTGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGTAGCGATTGATTTCTCTCTGACTCTCTGGCCCATGTACTGAA  1089

seq1  TTC  1099
      |||
seq2  TTC  1092