BAC Information

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BAC

Clone NameB6Ng01-310B02
Chromosome2 (Build37)
Map Location 136,025,818 - 136,026,518
singlet/doubletsinglet
Overlap genePak7
Upstream genePlcb1, LOC100043487, LOC100043786, LOC100043788, Plcb4, 6330527O06Rik
Downstream geneLOC668910, LOC100043492, BC034902, Ankrd5, Snap25, LOC668911, Mkks, 2210009G21Rik, Jag1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310B02.bB6Ng01-310B02.g
ACCGA102150GA102151
length1,2031,063
definitionB6Ng01-310B02.b B6Ng01-310B02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattttattttcagaagcaatgacatatggggccaagggaccagt
aggcgctgtgacacatgctgactgtagtgacagtgcttgctgtagtggtc
tgcgtcagcaggcctgtgttctcactggggaggttgtaggagattctaga
caaagtccatctgctgcttcttcacggttttgatcttctgtgaatagtct
ttagaaaacactgggattcccctctttttttcaatactttattttaatct
tcccaaaaaagcaaagtcattaattttgtttacgcattagaacccatatc
taactcacttcaatataatgtgcaaagcattttatgagtgttctaaatag
gtaattatagttctttaaatacacataactttctatgagtatgttgccca
atgtcatctaaatactgagaagtttctttttttctttctttttaaatttt
aatttaattaatttatttttatacctcatattttattacccatcccctcc
aatctaccttctcattgttccatatcacatatctcctccccagccccctg
tatcttgagggttaggtgcatcatctctgaatgacccggcagtactgtac
tgtatgtgtgctggggcctcatatcaggtggtgactgtttggtggtccag
tgtttgagagatctcaggtgtctagattaactgagactgctggtcctcct
acaggattgtccttctcaattattttcagccttccctaattcaacaacag
gggtcagctgcttctgtccattgatttggtacaaatatttatatctgact
ctttcagctgtttgttgggtctttcagagggtagtcatgagaggtccctt
tttgtgagcattccatagcctcagtaatagtgtcaggccttgggacctcc
tgttgagctggatcccactttggggcctggtccttggaccttcttttcct
cagactccttctccatttctatccttgtaattctttcagacaaggacaat
tatgggtcaaggattgatgtcctggttcctcctgagttgggctctaataa
gttccctctccctactgtctggcattcatctacgtcccttgccatttgag
ttcctgaagtctcttaccaccccagatctatggtgcatttagagagttcc
catcttcgattcaagtgcctgttccatcttctagcaggcctctcaaggag
cat
gaattcaagaaggtggactccagaaaatcaaataaccccattaaaaaatg
gggctcagagctaaacaaagaattctcacctgaggaatactgaatgtctg
agaagcacctgaaaaaattttcagcatccttaatcatcagggaaatgaaa
atcaaaacaaccctgagattccacctcacaccagtcagaatggctaagat
caaaaattcaggtgacagcagatgctggcgaggatgtggagaaagaggaa
cactcctccattgttggtgggattgcaagcttgtacaaccactgtgaaaa
tcagtctggcagttcctcagaaaattggacatagtactaccggaggatcc
cacaatacctctcctgggcatatatccagaagatgttccaaccggtaaga
aggacacatgctccactatgttcatagcagccttatttataatagccaga
agctggagagaacccagatgcccctcaacagaggaatggatacagaaaat
gtggtacatttacagaatggagtactactcagttaataaaaataatgaat
ttatgaaattcctaggcaaatggatgggcctggaggacatcatctttgag
tgaggtaacccaatcacaaaagaactcacacaatatgtactccctgataa
gtggatattagcccagaaacttagaatgcccaaggtataagatacaattt
gcaaaacacatgaaactcaaggagaacgaaaaccaaagtgtgaacacttt
gcccccttcttagaattgggaacaaaacacccatgaaggagttacagaga
caaagttttggagctgagacaaaggatggaccatctagatattttacctt
tagttaatcttgctaatgcagtactgtatatttatatgcaagaaacccta
aaaaaaggaaagaaaaataggatttcagaactcgatttaggatgtattgg
aggaaagaaacctaatataattgtaacagtaagtttttgccacccttaat
tgtttcagagggaataattgagccgaatttgaattgaaatctagctatac
tcatttttattga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_136025818_136026518
seq2: B6Ng01-310B02.g_412_1136

seq1  ACCGGAGGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGGATCCCACAATACCTCTCCTGGGCATATATCCAGAAGATGTTC  50

seq1  CAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTT  100

seq1  ATAATAGCCAGAAGCTGGAGAGAACCCAGATGCCCCTCAACAGAGGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCCAGAAGCTGGAGAGAACCCAGATGCCCCTCAACAGAGGAATG  150

seq1  GATACAGAAAATGTGGTACATTTACAGAATGGAGTACTACTCAGTTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAAAATGTGGTACATTTACAGAATGGAGTACTACTCAGTTAATA  200

seq1  AAAATAATGAATTTATGAAATTCCTAGGCAAATGGATGGGCCTGGAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGAATTTATGAAATTCCTAGGCAAATGGATGGGCCTGGAGGAC  250

seq1  ATCATC-TTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATGT  299
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTTGAGTGAGGTAACCCAATCACAAAAGAACTCACACAATATGT  300

seq1  ACTCCCTGATAAGTGGATATTAGCCCAGAAACTTAGAATGCCCAAGGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTGATAAGTGGATATTAGCCCAGAAACTTAGAATGCCCAAGGTAT  350

seq1  AAGATACAATTTGCAAAACACATGAAACTCAAGGAGAACGAAAACCAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACAATTTGCAAAACACATGAAACTCAAGGAGAACGAAAACCAAAG  400

seq1  TGTGAACACTTTG-CCCCTTCTTAGAATTGGGAACAAAACACCCATGAAG  448
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTGAACACTTTGCCCCCTTCTTAGAATTGGGAACAAAACACCCATGAAG  450

seq1  GAGTTACAGAGACAAAG-TTTGGAGCTGAGACAAAAGGATGGACCATCTA  497
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  GAGTTACAGAGACAAAGTTTTGGAGCTGAGAC-AAAGGATGGACCATCTA  499

seq1  GATATTTTACC-TTAGTTAATC-TGCTAATGCAGTACTGTATATTTATAT  545
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  GATATTTTACCTTTAGTTAATCTTGCTAATGCAGTACTGTATATTTATAT  549

seq1  GCAAGAAACC--TAAAAAAGGAAAGAAAAATAGGA-TTCAGAACTCGATT  592
      ||||||||||   |||||||||||||||||||||| ||||||||||||||
seq2  GCAAGAAACCCTAAAAAAAGGAAAGAAAAATAGGATTTCAGAACTCGATT  599

seq1  TAGGATGTATTG--AGAAAGAAA-CTAATATAA-TGTAACAG--AGTTTT  636
      ||||||||||||   |||||||| ||||||||| ||||||||  ||||||
seq2  TAGGATGTATTGGAGGAAAGAAACCTAATATAATTGTAACAGTAAGTTTT  649

seq1  TTGCACC--TTATTGTTT-AGAGGGAATAA-TGAG-CGA--TTGAATTGA  679
      |  ||||  | ||||||| ||||||||||| |||| |||  |||||||||
seq2  TGCCACCCTTAATTGTTTCAGAGGGAATAATTGAGCCGAATTTGAATTGA  699

seq1  AATC-AGC--TAATCA-TTTTATTGA  701
      |||| |||  || ||| |||||||||
seq2  AATCTAGCTATACTCATTTTTATTGA  725