BAC Information

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BAC

Clone NameB6Ng01-310L23
Chromosome2 (Build37)
Map Location 26,831,242 - 26,832,328
singlet/doubletsinglet
Overlap geneAdamts13
Upstream geneCamsap1, LOC100040100, LOC665199, Ubadc1, Btbd14a, C330006A16Rik, Lhx3, Qscn6l1, C030048H21Rik, 4932418E24Rik, Gpsm1, D2Bwg1335e, Card9, Snapc4, Sdccag3, Pmpca, Inpp5e, AU024582, Notch1, Egfl7, Agpat2, B230317C12Rik, 5730588L14Rik, LOC100039446, Lcn4, LOC669582, Abo, Surf6, Surf5-ps, Surf5, Rpl7a, Surf1, Surf2, Surf4, Gm711, Rexo4
Downstream gene5930434B04Rik, Slc2a6, LOC665315, 1110002H13Rik, Adamtsl2, C630035N08Rik, Dbh, Sardh, Vav2, D2Bwg1423e, Brd3, Wdr5, Rxra, Col5a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310L23.bB6Ng01-310L23.g
ACCGA102641GA102642
length1,2251,074
definitionB6Ng01-310L23.b B6Ng01-310L23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgacacatccaggatcaaaggctcacagaatcacaggatcacag
gaaggacaagctccagccagagacagggaggtcagataacaccggagata
accagatggcaagaggcaagcacaagaacataagaaaaaaaagccaattt
gacttgtcaacatcagaacccagttcttctaccacagcaagtactggata
ccccaacacacctataaggcaagattcagatttaaactctcatttcatga
cgataatagaggattttaagaaggacataagtaactcccttaaacaaaat
acacgagaacacaggtaaacaactagaagaaacacataaataccttaaag
aaatacaggagaacacaaacaggtgaaggaattgaacaaaactgtccagg
atctaaaaatggaaatagaatcattcaagaaaactcaaagggagacagtt
ctggagatggaaaatctaggaaacagagcaggagtcacagatgcaagcat
caccaacagaatatgtgagatagacaagagaatctcagtggcagaagata
caatagaagacatcaacacaatagtcaagaaaatacaaaaagcaaaaatc
tctgatctcaaaacattcaagaaacccaagacacaatgaaaagactgaac
ctaagaataataggtacagaagagagtagagattcccaactcaaagggcc
agcaaacatcttctacaaaattatagaagaaaaatttcctaacctaaaga
aagaaattcccataaacacacatgaagcctacagaacaccaaacagatgg
ggccagaaaagaaagtcctctcatcacataatacttaagacaccaaatgc
acagaaccaagaaagaatattaaaagcagtaagggaaaaagatcaagtaa
catataaagatagacctatcggacttaaaccagacttctcaacagagact
ctaaaagccagaagatcctgggcagatgtcataccaattcaaagagaaca
aaaatgccagcccaggctactaatacccagcaaactgcattaccatagat
ggagaaaccaaggtatcaaagaacaaaacaaaatttaaacaatattcttt
cacatcagcctgcagagaaataatagaaagaaaaggctaaccaagaggca
aactatacccaagtaagcagaagtaatctttcctacaaccaaaggaaagg
aaaacacccaaaaatataattttac
gaattcaggttgtcatacctctgctgagccatctctttccttccttcctt
tttttttttccaagcagaaatgaccaagctggcctcaaagtcgtgatttt
cctgtctcagtcttctgtatgctgggctttagatgtgtgccaccataccc
aacttaagtcattattattttgaagacacggctcgaacaaatggacccaa
tcactttcttcatgttggttctgtttttatttttgtttgtttgatagagg
gtttctctgtgtagccctggctgtcctggaactctgtaggccaggctggg
cttgaactcacagaaattcatctgcctctgccttccacgtgttcatattg
gttctagtgctatcatatgaacgcccatgaacaccatttgtatagtgtga
attcctgctgtcctcgaaccatcatatctcacatgtgctctgtgtgtgct
gtatggatggtagtcctctctaacagaacactggctgccatgttgccatt
ctgacatacatgttaatggtgtgaggcacctctgctcttccacctgttag
atcacagggaggaggagtctgtaaaaaaaaaaaatgaagcctcacatttc
agccagaatagtacctgttcacacctggaatgctcatttgccctgtgcct
ccctaagacagaggcaagaggcctgcagagagaacagttgtatactgagc
ctgctgtcggccaaatgaacattagggcagagctgagaggctccgggaag
gactctggtgttgagagggattccctgacgttgctccacggtcgcagaca
gtggagagggggaagaggaagacagtagtgaccgccctttcttttcaggc
ccatgagctccagctgaccctcagcttctatgggagagttcaactcaccg
tgctcaaatgtactgacttgtgaccacaagcctgtgagtgggagcctgtg
tcagaggcttgaggagagcccacagacccccagggccctgagccatctct
gcacgggtcatagcccacaccactcacgaattggaatagtgagcacggta
gcgtcttgtgtcctctgatgagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_26831242_26832328
seq2: B6Ng01-310L23.g_65_1138 (reverse)

seq1  GGCTCATCAGGAGGACACAGAACGCTA-CGTGCTCACTAATCTCAATATC  49
      ||||||||| |||||||||  |||||| ||||||||||| || |||| ||
seq2  GGCTCATCA-GAGGACACAAGACGCTACCGTGCTCACTATTC-CAAT-TC  47

seq1  GTGAGTGGTGTTGGGCTATGACCCGTGCAGGAAGATGGGCTCAGGGCCCT  99
      |||||||||| |||||||||||||||||||  |||| |||||||||||||
seq2  GTGAGTGGTG-TGGGCTATGACCCGTGCAG--AGAT-GGCTCAGGGCCCT  93

seq1  GGGGGGTCTGTGGGCTCTCCCTCCAAGCCTCTGGACACAGGGCCTCCCAC  149
       |||||||||||||||||||   ||||||||| ||||||||  |||||||
seq2  -GGGGGTCTGTGGGCTCTCC--TCAAGCCTCT-GACACAGG--CTCCCAC  137

seq1  TCACAGGGCTTGTGGTCACAAGTCAGTACATTTGAGCACGGTGAGTTGAA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACA-GGCTTGTGGTCACAAGTCAGTACATTTGAGCACGGTGAGTTGAA  186

seq1  CTCTCCCATAGAAGCTGAGGGTCAGCTGGAGCTCATGGCCCTGAAAAGAA  249
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCTCCCATAGAAGCTGAGGGTCAGCTGGAGCTCATGGGCCTGAAAAGAA  236

seq1  AGGGCGGTCACTACTGTCTTCCTCTTCCCCCTCTCCACTGTCTGCGACCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGGTCACTACTGTCTTCCTCTTCCCCCTCTCCACTGTCTGCGACCG  286

seq1  TGGAGCAACGTCAGGGAATCCCTCTCAACACCAGAGTCCTTCCCGGAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAACGTCAGGGAATCCCTCTCAACACCAGAGTCCTTCCCGGAGCC  336

seq1  TCTCAGCTCTGCCCTAATGTTCATTTGGCCGACAGCAGGCTCAGTATACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTCTGCCCTAATGTTCATTTGGCCGACAGCAGGCTCAGTATACA  386

seq1  ACTGTTCTCTCTGCAGGCCTCTTGCCTCTGTCTTAGGGAGGCACAGGGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTCTCTGCAGGCCTCTTGCCTCTGTCTTAGGGAGGCACAGGGCA  436

seq1  AATGAGCATTCCAGGTGTGAACAGGTACTATTCTGGCTGAAATGTGAGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCATTCCAGGTGTGAACAGGTACTATTCTGGCTGAAATGTGAGGC  486

seq1  TTCATTTTTTTTTTTTACAGACTCCTCCTCCCTGTGATCTAACAGGTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTTTTTTTTACAGACTCCTCCTCCCTGTGATCTAACAGGTGGA  536

seq1  AGAGCAGAGGTGCCTCACACCATTAACATGTATGTCAGAATGGCAACATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGGTGCCTCACACCATTAACATGTATGTCAGAATGGCAACATG  586

seq1  GCAGCCAGTGTTCTGTTAGAGAGGACTACCATCCATACAGCACACACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGTGTTCTGTTAGAGAGGACTACCATCCATACAGCACACACAGA  636

seq1  GCACATGTGAGATATGATGGTTCGAGGACAGCAGGAATTCACACTATACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTGAGATATGATGGTTCGAGGACAGCAGGAATTCACACTATACA  686

seq1  AATGGTGTTCATGGGCGTTCATATGATAGCACTAGAACCAATATGAACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGTTCATGGGCGTTCATATGATAGCACTAGAACCAATATGAACAC  736

seq1  GTGGAAGGCAGAGGCAGATGAATTTCTGTGAGTTCAAGCCCAGCCTGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGCAGAGGCAGATGAATTTCTGTGAGTTCAAGCCCAGCCTGGCC  786

seq1  TACAGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTCTATCAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTCTATCAAAC  836

seq1  AAACAAAAATAAAAACAGAACCAACATGAAGAAAGTGATTGGGTCCATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATAAAAACAGAACCAACATGAAGAAAGTGATTGGGTCCATTT  886

seq1  GTTCGAGCCGTGTCTTCAAAATAATAATGACTTAAGTTGGGTATGGTGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAGCCGTGTCTTCAAAATAATAATGACTTAAGTTGGGTATGGTGGC  936

seq1  ACACATCTAAAGCCCAGCATACAGAAGACTGAGACAGGAAAATCACGACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTAAAGCCCAGCATACAGAAGACTGAGACAGGAAAATCACGACT  986

seq1  TTGAGGCCAGCTTGGTCATTTCTGCTTGGAAAAAAAAAAAGGAAGGAAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCAGCTTGGTCATTTCTGCTTGGAAAAAAAAAAAGGAAGGAAGG  1036

seq1  AAAGAGATGGCTCAGCAGAGGTATGACAACCTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGGCTCAGCAGAGGTATGACAACCTGAATTC  1074