BAC Information

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BAC

Clone NameB6Ng01-313B23
Chromosome2 (Build37)
Map Location 3,070,614 - 3,071,803
singlet/doubletsinglet
Overlap gene9630050M13Rik
Upstream genenone
Downstream geneNmt2, Rpp38, Acbd7, Olah, Meig1, Dclre1c, Suv39h2, Hspa14, Armetl1, LOC100040219, LOC666495, 3110001A13Rik, LOC100040257, LOC100040163, LOC666944, 1700080N15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313B23.bB6Ng01-313B23.g
ACCGA104421GA104422
length1,1901,095
definitionB6Ng01-313B23.b B6Ng01-313B23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagcatttgaatggcgtgagctaaaatagcccagtgtatata
tgttctgaatcagaatagtccattcagaggggtcataaccttcatgttta
tgattgattatacttcaattaagtgggaagagatagttggaagaaaagac
cattatgttaggattccagtgtcatgtagaacataatctacttccaacaa
ttaaaatagaaagcaagcaagcaagcccacacagcatagtttaaaagagc
actccccctttctgtgctaccaagaatacatcattggaaaagtccacatg
gaatacaggccacttcaaaatggagcatcagaaatggaaaggatggcagc
cagccaatttctgaagagtgtgatcatgtgacttttgttgttgttgttac
acttcccaactttcacagcaagcctcatgaatggccctgagacagatgtg
agttgtacgttcactccaaatgtggaatagaggtgaacacacaccacact
tgaccatgaacagcaagggatagaatacagagccatctttctgtgtcctg
cccagctacaaactaacttctgccgagccctagtaaggtctctgttcata
cccttagagtcgacttgacttctgcagagcttcatcttcctgtcctaagt
ggtctaatttcttcttaggggagggcgttgatcatttattctgataacac
aaaataatgtgaaaacgcaaaatatgaaccacattcttttggtgactgat
catctttaataaatattagaacatttctgatgatgttaattccagccacc
ctctggtctcctataattgtgggctgtgttgtgtatccagctggctttca
gtggtgactttacttacacacattcacctaaaggcatgtctagaggtttc
ctattgctgccataaaattcatttaaccacaagtgattaagtgataaagc
ccttagatgcgagggtaagggaggcaaaggcaagagtccactgaaaacag
acaacaaaagaacctacctagtcagccatttcatccttgctatcagatag
accacaacagaaaacatcttgtaacaatttcttgcatcttacacatatta
tctctaccatctgccagcactgaacaaggtgcaaaagcatctagctgaca
ggcaatgagggaagcttaaggtactttcctagtgaacttc
gaattctctttagatctgaagagcttcttaaaaacaggattacttggttt
gttgatgccctagtttcttgagttctttatatatcttggacattagccct
ctgttggatgtggagttggtgaaaatgatttcccattctgtaggctgtga
ttttgtcctattgacgatgtcctttgccttacagaagcttttcagtttca
tgaggtgacatttattattgttcttagtgccctttggtgttctgcttagg
aagtcgtctactgtgcaagactattccccacttttcttgtattaggttca
ttgtatctggtttatgttgaagttcatttggaagagatatttttgctgca
aggtgatagatatgatctgtttgttttcttccacatgcatacatccagaa
tcaattgtttaaaatgttttctttttttttcattgtgtgtatatgacttc
tttataagaaagcagggtgtgtcaatttatgtctgggtctttgatttgat
tctgttggccaacgagtctctttttatgccagtaccatgtgggttttgct
actacagctcttcagtacagtttgaagtcagggatgatgatagctttgga
agttatattattgttcaggtctgttttagttatcctggttttgtttccat
atgaagttgaatattgtcttttcaagattttaaaggaattatgtttaaat
tttgatgcagattgtattgaatcttcagattcctttcggtaggatggcca
cttttactatattaacctactgatccatgagcatgggagatctttccatc
ctttgatgtctttttctatttctttcttcaaaaacttgactttttatcat
acaagtctttcactttgtgggttagggttacctcaagatgttttataata
ttttcagtttctgtgaagagtgttgcttccctaattcttctcagtttgtt
tgtcatttgtatataggagggtttttttcaataacctaaatcttggtatc
aggtgtgcatcagctgtagggaggtttctaatgagtttatcctaatatca
taccatgaccctatcattcttaagaaaataggttatggatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_3070614_3071803
seq2: B6Ng01-313B23.b_46_1235 (reverse)

seq1  GAAGTTCA----TGAAGTACCTTTAGCTTCCCTCATGCCTTGTCAGCTAG  46
      ||||||||      ||||||||| ||||||||||||  | ||||||||||
seq2  GAAGTTCACTAGGAAAGTACCTTAAGCTTCCCTCATTGCCTGTCAGCTAG  50

seq1  ATTGCTTTTTTCCACTTTGTTCCAGTGCT-GCAGATG--TGAGAT-ATAT  92
      | |||  |||| ||| ||||| ||||||| |||||||   ||||| ||||
seq2  A-TGC--TTTTGCACCTTGTT-CAGTGCTGGCAGATGGTAGAGATAATAT  96

seq1  GTGTTAGATGCAAGAAATTGTTAACAGATG-TTTCTGTTGTGGTTCCTAT  141
      |||| ||||||||||||||||||  ||||| |||||||||||||  ||||
seq2  GTGTAAGATGCAAGAAATTGTTACAAGATGTTTTCTGTTGTGGT--CTAT  144

seq1  CCTGATAGCAAGGATGAAATGGGCTGACTAGGTAGGTTCTTTTTGTTGTT  191
       ||||||||||||||||||| |||||||||||||||||| ||||||||| 
seq2  -CTGATAGCAAGGATGAAAT-GGCTGACTAGGTAGGTTC-TTTTGTTGT-  190

seq1  CTTGTTTTCAGTGGACTCTTGCCTTTGCCTCCCTTACCCTCGCATCTAA-  240
        ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  -CTGTTTTCAGTGGACTCTTGCCTTTGCCTCCCTTACCCTCGCATCTAAG  239

seq1  GGCTTTATCACTTAATCACTTGTGGTTAAATGAATTTTATGGCAGCAATA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTATCACTTAATCACTTGTGGTTAAATGAATTTTATGGCAGCAATA  289

seq1  GGAAACCTCTAGACATGCC-TTAGGTGAATGTGTGTAAGTAAAGTCACCA  339
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGAAACCTCTAGACATGCCTTTAGGTGAATGTGTGTAAGTAAAGTCACCA  339

seq1  CTGAAAGCCAGCTGGATACACAACACAGCCCACAATTATAGGAGACCAGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCCAGCTGGATACACAACACAGCCCACAATTATAGGAGACCAGA  389

seq1  GGGTGGCTGGAATTAACATCATCAGAAATGTTCTAATATTTATTAAAGAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCTGGAATTAACATCATCAGAAATGTTCTAATATTTATTAAAGAT  439

seq1  GATCAGTCACCAAAAGAATGTGGTTCATATTTTGCGTTTTCACATTATTT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTCACCAAAAGAATGTGGTTCATATTTTGCGTTTTCACATTATTT  489

seq1  TGTGTTATCAGAATAAATGATCAACGCCCTCCCCTAAGAAGAAATTAGAC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATCAGAATAAATGATCAACGCCCTCCCCTAAGAAGAAATTAGAC  539

seq1  CACTTAGGACAGGAAGATGAAGCTCTGCAGAAGTCAAGTCGACTCTAAGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGGACAGGAAGATGAAGCTCTGCAGAAGTCAAGTCGACTCTAAGG  589

seq1  GTATGAACAGAGACCTTACTAGGGCTCGGCAGAAGTTAGTTTGTAGCTGG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACAGAGACCTTACTAGGGCTCGGCAGAAGTTAGTTTGTAGCTGG  639

seq1  GCAGGACACAGAAAGATGGCTCTGTATTCTATCCCTTGCTGTTCATGGTC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACACAGAAAGATGGCTCTGTATTCTATCCCTTGCTGTTCATGGTC  689

seq1  AAGTGTGGTGTGTGTTCACCTCTATTCCACATTTGGAGTGAACGTACAAC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGTGTGTGTTCACCTCTATTCCACATTTGGAGTGAACGTACAAC  739

seq1  TCACATCTGTCTCAGGGCCATTCATGAGGCTTGCTGTGAAAGTTGGGAAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTGTCTCAGGGCCATTCATGAGGCTTGCTGTGAAAGTTGGGAAG  789

seq1  TGTAACAACAACAACAAAAGTCACATGATCACACTCTTCAGAAATTGGCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAACAACAACAAAAGTCACATGATCACACTCTTCAGAAATTGGCT  839

seq1  GGCTGCCATCCTTTCCATTTCTGATGCTCCATTTTGAAGTGGCCTGTATT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCATCCTTTCCATTTCTGATGCTCCATTTTGAAGTGGCCTGTATT  889

seq1  CCATGTGGACTTTTCCAATGATGTATTCTTGGTAGCACAGAAAGGGGGAG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGACTTTTCCAATGATGTATTCTTGGTAGCACAGAAAGGGGGAG  939

seq1  TGCTCTTTTAAACTATGCTGTGTGGGCTTGCTTGCTTGCTTTCTATTTTA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTTAAACTATGCTGTGTGGGCTTGCTTGCTTGCTTTCTATTTTA  989

seq1  ATTGTTGGAAGTAGATTATGTTCTACATGACACTGGAATCCTAACATAAT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGAAGTAGATTATGTTCTACATGACACTGGAATCCTAACATAAT  1039

seq1  GGTCTTTTCTTCCAACTATCTCTTCCCACTTAATTGAAGTATAATCAATC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTTCTTCCAACTATCTCTTCCCACTTAATTGAAGTATAATCAATC  1089

seq1  ATAAACATGAAGGTTATGACCCCTCTGAATGGACTATTCTGATTCAGAAC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATGAAGGTTATGACCCCTCTGAATGGACTATTCTGATTCAGAAC  1139

seq1  ATATATACACTGGGCTATTTTAGCTCACGCCATTCAAATGCTTTTGAATT  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACACTGGGCTATTTTAGCTCACGCCATTCAAATGCTTTTGAATT  1189

seq1  C  1190
      |
seq2  C  1190