BAC Information

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BAC

Clone NameB6Ng01-313G16
Chromosome2 (Build37)
Map Location 154,041,184 - 154,041,529
singlet/doubletsinglet
Overlap geneU46068
Upstream geneTspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik
Downstream geneBC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313G16.bB6Ng01-313G16.g
ACCGA104636GA104637
length1,205346
definitionB6Ng01-313G16.b B6Ng01-313G16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaaatcattaattcatctaaacagcattatctcatgaaagt
tcgtcttcatgttgatctgcaggaaaattgcccaacagagtgggctgtca
tccaggaagtaatcacatcaggctatagtgagggtcaccccatgcccagt
cacaccatgccagatatctgaggaatatagcaatgatagacaggagaagg
cacagcagtagcaggaagcagtcctgggacaaagcctctagggctgtgcc
tcttcaaggtacagccatcacagctgtgcaaaacagtggcctgtctccag
gaagctcacctgcccactactctttttcctgtgtggtgtccgccagcaac
tctaggttgggtcaatttaacagcttcaacaatggggctagagtggggag
atggctcagtggctaagtacatatattgctcttccacaggacctgagttg
gtttcaactccagcctcctgagatatccaacacccttctggactacacct
gtactcgtgtgtgtccctgccccaataattagaaataaaaacgaaaaaaa
aaaacccaaacaaacaaacaaaaacaaccctctaaaaagcaaactatgga
gctggagagatgtatcagcagtaagcagcatatactgttcttacagggga
cccagatttggttcccagcatctatctgtgtggggcagcttacaaatgcc
tgtcattgcaggtccaggagattcaactctgtgttctgaatttcacaggc
aactacactcatgtgcacactcttgcacaggtgcccattcacataaacaa
aaataataaaaataagatccttaaagaaactccaaataactaaccagtac
aaggagttggtaaaaggtttactttaaagtttgttgttgttgttttgttt
tttcaagatggggtttccctggagctcactccctagaccaggctggcatt
gatccatctgccttcttctgcctgagttcaggggttaagatgtgtgctac
caccaccagttcacctttaaagtttatggactaataaataatgttttttg
ggaggttatgattatatcagcatactatttatattaatttctcaataggt
tagcaaatattacgggcctgaagagaaaaaagtgtagtgtgttggactag
aacttgcttcgtgatgtaaggtattttctaatttaatggcataatctcat
ttttt
caaacagaagaatgaagggactctacaggagccacagaacaaggaaaccc
caccactgggatggcctgcacgcatcaccccaggcttcaaactgcccatt
ctgaaaaatttcaagacaaaagctataacagcctagatactaaacccttg
ggacccagcattgaagtggtctctgcacccctgccagtcctgcaaggtct
accaccttctgtcccagactgagttcagtgactccaactggaggctccag
caataaagttaggctcaggagaacattctgatctgcctgtacagggtgag
ataatagctaggtataaatagatggatgggtggatggatggatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_154041184_154041529
seq2: B6Ng01-313G16.g_74_419

seq1  CAAACAGAAGAATGAAGGGACTCTACAGGAGCCACAGAACAAGGAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAAGAATGAAGGGACTCTACAGGAGCCACAGAACAAGGAAACCC  50

seq1  CACCACTGGGATGGCCTGCACGCATCACCCCAGGCTTCAAACTGCCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTGGGATGGCCTGCACGCATCACCCCAGGCTTCAAACTGCCCATT  100

seq1  CTGAAAAATTTCAAGACAAAAGCTATAACAGCCTAGATACTAAACCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAATTTCAAGACAAAAGCTATAACAGCCTAGATACTAAACCCTTG  150

seq1  GGACCCAGCATTGAAGTGGTCTCTGCACCCCTGCCAGTCCTGCAAGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAGCATTGAAGTGGTCTCTGCACCCCTGCCAGTCCTGCAAGGTCT  200

seq1  ACCACCTTCTGTCCCAGACTGAGTTCAGTGACTCCAACTGGAGGCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTCTGTCCCAGACTGAGTTCAGTGACTCCAACTGGAGGCTCCAG  250

seq1  CAATAAAGTTAGGCTCAGGAGAACATTCTGATCTGCCTGTACAGGGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTTAGGCTCAGGAGAACATTCTGATCTGCCTGTACAGGGTGAG  300

seq1  ATAATAGCTAGGTATAAATAGATGGATGGGTGGATGGATGGATGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCTAGGTATAAATAGATGGATGGGTGGATGGATGGATGGA  346