BAC Information

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BAC

Clone NameB6Ng01-313I01
Chromosome2 (Build37)
Map Location 53,161,992 - 53,163,045
singlet/doubletsinglet
Overlap genenone
Upstream geneNeb, LOC100041670, Arl5a, Cacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6
Downstream geneLOC666872, LOC666876, LOC207933, Rprm, LOC666913, LOC626563
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313I01.bB6Ng01-313I01.g
ACCGA104700GA104701
length1,1431,052
definitionB6Ng01-313I01.b B6Ng01-313I01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacgggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaactgaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatatcagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacagagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcataggctcccat
ggaggagctagagaagtagccagagctaagggatctgcaccctatagtga
acaacatatgagctaccagtacccggagctcttgactctagctgcatata
ttatcaaagatgcctagtcgccatcactgaagaagccatgaactgcactt
ttatgccagtacagggaatccagggcaaagggaatggttgcca
gaattcttttcttgcccttaagcatgcacagaagctgtgagaacgcatca
gtaggatgcagattcacattaaagtgctagcctctgggttagcatttatg
ctatttccataatttcttttttttacaatagaaaggtcattctttggatc
atctaagaacagtagctatcctttgttatttcatgattttcatctaagta
ttaaaaaatacgaacagagtgtaatttaaaaattttgagtataatcaagg
ctggcagaagctaattaagtaggacataggcagaaaggttcttaattagc
ctttaagaaattgtcacttatcttgcgacttgccctcttaaggaacaaaa
gagccagaagaaacagcacatcacatgtgtgcagaagaaggccatagctc
agaccatctgggcacaaaggcaattgtaaaacacaggagagtattaagac
agagtgagtctgaccttgtgttgcaagaatagttgtctaactaaatagag
gagaacgttaatataataattttttctgttatgattagttaaactcattt
cagtccatggggatacagtttgaagagagtaaaataagtatgtggtttcc
aaggactggatgatgtcacaaaataaatggctgtatatatacacatacac
acaaacatgtatggatatgtgtgaatagatataggcatgtatttataaat
tcctgcatttggggtgtattgcaatttttaactttttttttttttgtcgt
ttgtgacctggctcctgagtgtcacattcttcacttctattgacttacgt
tgttagaacaagttgtaaaccttgatgaggttcaaaggtataagacagac
attacatcactgataggggagagggaaattatgaaaataatatgtgagat
tgaaaattcttataccaattctgcaatacaatctgccaatatctttaaag
aaatttgtccatttctcctaatagtctactgaataatattttcatgataa
agtctagcatcgttccatattagtaaggattggatgcaatgatgtccatt
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53161992_53163045
seq2: B6Ng01-313I01.g_65_1116

seq1  GAATTCTTTTCTTGCCCTTAAGCATGCACAGAAGCTGTGAGAACGCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTGCCCTTAAGCATGCACAGAAGCTGTGAGAACGCATCA  50

seq1  GTAGGATGCAGATTCACATTAAAGTGCTAGCCTCTGGGTTAGCATTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATGCAGATTCACATTAAAGTGCTAGCCTCTGGGTTAGCATTTATG  100

seq1  CTATTTCCATAATTTCTTTTTTTTACAATAGAAAGGTCATTCTTTGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCATAATTTCTTTTTTTTACAATAGAAAGGTCATTCTTTGGATC  150

seq1  ATCTAAGAACAGTAGCTATCCTTTGTTATTTCATGATTTTCATCTAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAACAGTAGCTATCCTTTGTTATTTCATGATTTTCATCTAAGTA  200

seq1  TTAAAAAATACGAACAGAGTGTAATTTAAAAATTTTGAGTATAATCAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATACGAACAGAGTGTAATTTAAAAATTTTGAGTATAATCAAGG  250

seq1  CTGGCAGAAGCTAATTAAGTAGGACATAGGCAGAAAGGTTCTTAATTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAAGCTAATTAAGTAGGACATAGGCAGAAAGGTTCTTAATTAGC  300

seq1  CTTTAAGAAATTGTCACTTATCTTGCGACTTGCCCTCTTAAGGAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGAAATTGTCACTTATCTTGCGACTTGCCCTCTTAAGGAACAAAA  350

seq1  GAGCCAGAAGAAACAGCACATCACATGTGTGCAGAAGAAGGCCATAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAAGAAACAGCACATCACATGTGTGCAGAAGAAGGCCATAGCTC  400

seq1  AGACCATCTGGGCACAAAGGCAATTGTAAAACACAGGAGAGTATTAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCTGGGCACAAAGGCAATTGTAAAACACAGGAGAGTATTAAGAC  450

seq1  AGAGTGAGTCTGACCTTGTGTTGCAAGAATAGTTGTCTAACTAAATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTCTGACCTTGTGTTGCAAGAATAGTTGTCTAACTAAATAGAG  500

seq1  GAGAACGTTAATATAATAATTTTTTCTGTTATGATTAGTTAAACTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACGTTAATATAATAATTTTTTCTGTTATGATTAGTTAAACTCATTT  550

seq1  CAGTCCATGGGGATACAGTTTGAAGAGAGTAAAATAAGTATGTGGTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATGGGGATACAGTTTGAAGAGAGTAAAATAAGTATGTGGTTTCC  600

seq1  AAGGACTGGATGATGTCACAAAATAAATGGCTGTATATATACACATACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTGGATGATGTCACAAAATAAATGGCTGTATATATACACATACAC  650

seq1  ACAAACATGTATGGATATGTGTGAATAGATATAGGCATGTATTTATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATGTATGGATATGTGTGAATAGATATAGGCATGTATTTATAAAT  700

seq1  TCCTGCATTTGGGGTGTATTGCAATTTTTAACTTTTTTTTTTTTTGTCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATTTGGGGTGTATTGCAATTTTTAACTTTTTTTTTTTTTGTCGT  750

seq1  TTGTGACCTGGCTCCTGAGTGTCACATTCTTCACTTCTATTGACTTACGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACCTGGCTCCTGAGTGTCACATTCTTCACTTCTATTGACTTACGT  800

seq1  TGTTAGAACAAGTTGTAAACCTTGATGAGGTTCAAAGGTATAAGACAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAACAAGTTGTAAACCTTGATGAGGTTCAAAGGTATAAGACAGAC  850

seq1  ATTACATCACTGATAGGGGAGAGGGAAATTATG-AAATAATATGTGAGAA  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  ATTACATCACTGATAGGGGAGAGGGAAATTATGAAAATAATATGTGAGAT  900

seq1  TGAAAATTCTTATACCAATTCTGCAAAATACAATCTGCCAATATCTTTAA  949
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  TGAAAATTCTTATACCAATTCTGC--AATACAATCTGCCAATATCTTTAA  948

seq1  AGAAATTTGTCCATTTCTCCTAATAGTCTTACTG-ATAATATTTTCATGA  998
      |||||||||||||||||||||||||||| ||||| |||||||||||||||
seq2  AGAAATTTGTCCATTTCTCCTAATAGTC-TACTGAATAATATTTTCATGA  997

seq1  TAAAGTCTTAGCATCGTTTCTATATTAGT-AGGATTTGATGCAATGATGT  1047
      ||||||| |||||||| ||| |||||||| |||||| |||||||||||||
seq2  TAAAGTC-TAGCATCG-TTCCATATTAGTAAGGATTGGATGCAATGATGT  1045

seq1  CCATTCT  1054
      |||||||
seq2  CCATTCT  1052