BAC Information

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BAC

Clone NameB6Ng01-314J22
Chromosome2 (Build37)
Map Location 69,053,281 - 69,262,924
singlet/doubletdoublet
Overlap geneG6pc2, Abcb11, Dhrs9, Lrp2
Upstream geneStk39, LOC100039683, Gm1323, 4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25
Downstream geneBbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J22.bB6Ng01-314J22.g
ACCGA105497GA105498
length1,0191,052
definitionB6Ng01-314J22.b B6Ng01-314J22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,261,921 - 69,262,924)(69,053,281 - 69,054,337)
sequence
gaattctggagctgactgactaaaaccaaacctacttcataaagtagggt
gccaaacagataccagttaatcgaaacctcagctgggtgtttggctctgg
gtgcaaactgttattgtattgactatttatttcctcagttgacgacgaaa
agaaagggaaaacattcttactgagcctttttcacgtctttgcctaaagc
tgtacgtttgtgtcaggatgtactgtatgtcccggctcttctgagcagtt
gctgaattctctatcacaggaaccatggcacgagcgtacattttctatag
caagtagcattcccggtttctctgtgctaatattgcacgtgtgttaacga
atgaatggaagggtgggagagtggatgaatgaaatatactactgattatt
ttattctcaagtcctcgaaatattttgttgctcatattttgagtaccgat
tgtaattactttgattagaaaagaaaaagctactggaaatgatgctgctg
gaaatttctaataaatgtgtattttatcagatggcttttgggtctctgac
tccttcttgagccttggtcacaagttgcttgaaacggtgcttggttggtg
acttagttagggttttactgctgtgaacagacatcatgaccaaggcaact
cttataagaacaacatttaattggggctggcttacaggttcagaggtttt
agtccattatcatcgaggcaggagcatgggcagcatccaggcaggcatgg
tgcaggaggagctgagagttctacattttcatctgaaaggctgctatcag
aattactgacttcaggcagctaaggactagtgtatcaaagcccatgtcca
cagttgacacacctatttccaataaggctatacctcctatagtgcatttc
cctggggccaaacatatataaactaccacattttgcttctctgtcaaacc
aattcttcaatgatgtgtttggattggaaaacttatattggagacaatcc
caggcttacagaattttta
gaattcagtgacctaacaccttagcgccaccaagaaaaaaatgattagca
caagtccatgggcaactctcctagtaagaaacctgtgatccaagcaccgg
cttatggatgtgtaggtcatgatcatttctagggacgatttcataatgag
actaatggaaggggtccctgaaagctgtggcaagataatttataatagtg
tcattacggaatgccagtattcctgggatgtgagccagaatggcggtaaa
gtaattattttctaaaactcactagagcttaaaccctagagtctgaaata
aatccatttatactgcaaggtgacaccggagagttctcaaatgtgattta
ttttagaaaaggcagataagtttgttagaagggtaacggccatgaagaca
ttaaaggcctatttttgtttcctgccaaggtatgagcagcgctagccaaa
gctaaacttgtctaaatggtcttgaactgtagcaggcactataactcaga
aacaaatagttcattttataataagactataccttgtggtttttaaatat
tagctgtggcaaaacatcctggagaattctgcccaatggcttccacgttg
cattctaaaacaagcagagtttacttaaaacccagggaaagtttaaataa
accagaatgagaacattctggagagaacagaaagtaatcaattactagaa
ctaacatctaaacaggacaacaatacagggttttgagactggctacatta
gtgaagaaaacacacccacacagtcattatcagtaaggagatcattgcca
ccagccagtcatgctgggagagcagagtactgaagccgtctccaaggaac
agggaaagtagggatcctgggatagcagtccagggatgcccgtgaacttc
atgttgtacttaattgcttgggatcagaggttccattgataatctttgaa
gctgtgaccttcaaataaatgtgcatagggaacctatagtagaacacata
tgactaaccagtacctcgggagcttcttgactctagctgcatatgttatc
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69261921_69262924
seq2: B6Ng01-314J22.b_45_1063 (reverse)

seq1  TTAAAA--TCTG-AAGCCT-GGATTGTCTCC-ATAATAGTCT--CCATTC  43
       |||||  |||| |||||| ||||||||||| |||  ||| |  | || |
seq2  -TAAAAATTCTGTAAGCCTGGGATTGTCTCCAATATAAGTTTTCCAATCC  49

seq1  AAACACA-CACTGAAGAATTGGTTTGACAGAG-AGC-AAATGTGGTAGTT  90
      ||||||| || ||||||||||||||||||||| ||| |||||||||||||
seq2  AAACACATCATTGAAGAATTGGTTTGACAGAGAAGCAAAATGTGGTAGTT  99

seq1  TATATATGTTTGG-CCCAGGGAATGGCACTATTAGGAGGTATAGCCTTAT  139
      ||||||||||||| |||||||||  |||||| ||||||||||||||||||
seq2  TATATATGTTTGGCCCCAGGGAAATGCACTA-TAGGAGGTATAGCCTTAT  148

seq1  TGG-AATAGGTGTGTC-ACTGTGGACATGGGCTTTGATACACTAGTCC-T  186
      ||| |||||||||||| ||||||||||||||||||||||||||||||| |
seq2  TGGAAATAGGTGTGTCAACTGTGGACATGGGCTTTGATACACTAGTCCTT  198

seq1  AGCTGCCTGGAAGTCAGT-ATTCTGATAGCAGCC-TTCAGATGAAAATGT  234
      |||||||| ||||||||| ||||||||||||||| |||||||||||||||
seq2  AGCTGCCT-GAAGTCAGTAATTCTGATAGCAGCCTTTCAGATGAAAATGT  247

seq1  AGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGGATGCTG-CCATGCT  283
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAACTCTCAGCTCCTCCTGCACCATGCCTGCCTGGATGCTGCCCATGCT  297

seq1  CCTGCCTCGATGATAATGGACT-AAACCTCTGAACCTGTAAGCCAGCCCC  332
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTGCCTCGATGATAATGGACTAAAACCTCTGAACCTGTAAGCCAGCCCC  347

seq1  AATTAAATGTTGTTCTTATAAGAGTTGCCTTGGTCATGATGTCTGTTCAC  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGTTGTTCTTATAAGAGTTGCCTTGGTCATGATGTCTGTTCAC  397

seq1  AGCAGTAAAACCCTAACTAAGTCACCAACCAAGCACCGTTTCAAGCAACT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAAAACCCTAACTAAGTCACCAACCAAGCACCGTTTCAAGCAACT  447

seq1  TGTGACCAAGGCTCAAGAAGGAGTCAGAGACCCAAAAGCCATCTGATAAA  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAAGGCTCAAGAAGGAGTCAGAGACCCAAAAGCCATCTGATAAA  497

seq1  ATACACATTTATTAGAAATTTCCAGCAGCATCATTTCCAGTAGCTTTTTC  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATTTATTAGAAATTTCCAGCAGCATCATTTCCAGTAGCTTTTTC  547

seq1  TTTTCTAATCAAAGTAATTACAATCGGTACTCAAAATATGAGCAACAAAA  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATCAAAGTAATTACAATCGGTACTCAAAATATGAGCAACAAAA  597

seq1  TATTTCGAGGACTTGAGAATAAAATAATCAGTAGTATATTTCATTCATCC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGAGGACTTGAGAATAAAATAATCAGTAGTATATTTCATTCATCC  647

seq1  ACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGCACA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCACCCTTCCATTCATTCGTTAACACACGTGCAATATTAGCACA  697

seq1  GAGAAACCGGGAATGCTACTTGCTATAGAAAATGTACGCTCGTGCCATGG  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCGGGAATGCTACTTGCTATAGAAAATGTACGCTCGTGCCATGG  747

seq1  TTCCTGTGATAGAGAATTCAGCAACTGCTCAGAAGAGCCGGGACATACAG  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGATAGAGAATTCAGCAACTGCTCAGAAGAGCCGGGACATACAG  797

seq1  TACATCCTGACACAAACGTACAGCTTTAGGCAAAGACGTGAAAAAGGCTC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCTGACACAAACGTACAGCTTTAGGCAAAGACGTGAAAAAGGCTC  847

seq1  AGTAAGAATGTTTTCCCTTTCTTTTCGTCGTCAACTGAGGAAATAAATAG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAATGTTTTCCCTTTCTTTTCGTCGTCAACTGAGGAAATAAATAG  897

seq1  TCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGAGGTTTC  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACAATAACAGTTTGCACCCAGAGCCAAACACCCAGCTGAGGTTTC  947

seq1  GATTAACTGGTATCTGTTTGGCACCCTACTTTATGAAGTAGGTTTGGTTT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACTGGTATCTGTTTGGCACCCTACTTTATGAAGTAGGTTTGGTTT  997

seq1  TAGTCAGTCAGCTCCAGAATTC  1004
      ||||||||||||||||||||||
seq2  TAGTCAGTCAGCTCCAGAATTC  1019

seq1: chr2_69053281_69054337
seq2: B6Ng01-314J22.g_68_1119

seq1  GAATTCAGTGACCTAACACCTTAGCGCCACCAAGAAAAAAATGATTAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACCTAACACCTTAGCGCCACCAAGAAAAAAATGATTAGCA  50

seq1  CAAGTCCATGGGCAACTCTCCTAGTAAGAAACCTGTGATCCAAGCACCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCATGGGCAACTCTCCTAGTAAGAAACCTGTGATCCAAGCACCGG  100

seq1  CTTATGGATGTGTAGGTCATGATCATTTCTAGGGACGATTTCATAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGATGTGTAGGTCATGATCATTTCTAGGGACGATTTCATAATGAG  150

seq1  ACTAATGGAAGGGGTCCCTGAAAGCTGTGGCAAGATAATTTATAATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGAAGGGGTCCCTGAAAGCTGTGGCAAGATAATTTATAATAGTG  200

seq1  TCATTACGGAATGCCAGTATTCCTGGGATGTGAGCCAGAATGGCGGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACGGAATGCCAGTATTCCTGGGATGTGAGCCAGAATGGCGGTAAA  250

seq1  GTAATTATTTTCTAAAACTCACTAGAGCTTAAACCCTAGAGTCTGAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATTTTCTAAAACTCACTAGAGCTTAAACCCTAGAGTCTGAAATA  300

seq1  AATCCATTTATACTGCAAGGTGACACCGGAGAGTTCTCAAATGTGATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTTATACTGCAAGGTGACACCGGAGAGTTCTCAAATGTGATTTA  350

seq1  TTTTAGAAAAGGCAGATAAGTTTGTTAGAAGGGTAACGGCCATGAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAAAGGCAGATAAGTTTGTTAGAAGGGTAACGGCCATGAAGACA  400

seq1  TTAAAGGCCTATTTTTGTTTCCTGCCAAGGTATGAGCAGCGCTAGCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCCTATTTTTGTTTCCTGCCAAGGTATGAGCAGCGCTAGCCAAA  450

seq1  GCTAAACTTGTCTAAATGGTCTTGAACTGTAGCAGGCACTATAACTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACTTGTCTAAATGGTCTTGAACTGTAGCAGGCACTATAACTCAGA  500

seq1  AACAAATAGTTCATTTTATAATAAGACTATACCTTGTGGTTTTTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAGTTCATTTTATAATAAGACTATACCTTGTGGTTTTTAAATAT  550

seq1  TAGCTGTGGCAAAACATCCTGGAGAATTCTGCCCAATGGCTTCCACGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGGCAAAACATCCTGGAGAATTCTGCCCAATGGCTTCCACGTTG  600

seq1  CATTCTAAAACAAGCAGAGTTTACTTAAAACCCAGGGAAAGTTTAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAAAACAAGCAGAGTTTACTTAAAACCCAGGGAAAGTTTAAATAA  650

seq1  ACCAGAATGAGAACATTCTGGAGAGAACAGAAAGTAATCAATTACTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATGAGAACATTCTGGAGAGAACAGAAAGTAATCAATTACTAGAA  700

seq1  CTAACATCTAAACAGGACAACAATACAGGGTTTTGAGACTGGCTACATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATCTAAACAGGACAACAATACAGGGTTTTGAGACTGGCTACATTA  750

seq1  GTGAAGAAAACACACCCACACAGTCATTATCAGTAAGGAGATCATTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAAACACACCCACACAGTCATTATCAGTAAGGAGATCATTGCCA  800

seq1  CCAGCCAGTCATGCTGGGAGAGCAGAGTACTGAAGCCGTCTCCAAGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGCCAGTCATGCTGGGAGAGCAGAGTACTGAAGCCGTCTCCAAGG-AA  849

seq1  CAGGGAAAGTAGGGATCCTGGGGATAGCAGTCCAGGGGATGCCCGTGAAC  900
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  CAGGGAAAGTAGGGATCCT-GGGATAGCAGTCCA-GGGATGCCCGTGAAC  897

seq1  TTCATGTTGTACTTAATTTGCTT-GGATCAGAGGTTCCATTGATAATCTT  949
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  TTCATGTTGTACTTAA-TTGCTTGGGATCAGAGGTTCCATTGATAATCTT  946

seq1  TGAAAGCTGTGACCTTCAAATAAATGTGCATAGGAACCCTATAGGTAGAA  999
      || ||||||||||||||||||||||||||||||| | |||||| ||||||
seq2  TG-AAGCTGTGACCTTCAAATAAATGTGCATAGGGAACCTATA-GTAGAA  994

seq1  CAACATTATGAACTAACCAGTACC-CCGGAGC-TCTTGACTCTAGCTGCA  1047
      | ||| |||| ||||||||||||| | ||||| |||||||||||||||||
seq2  C-ACA-TATG-ACTAACCAGTACCTCGGGAGCTTCTTGACTCTAGCTGCA  1041

seq1  TATG-TATCAA  1057
      |||| ||||||
seq2  TATGTTATCAA  1052