BAC Information

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BAC

Clone NameB6Ng01-314K02
Chromosome2 (Build37)
Map Location 92,813,636 - 92,980,731
singlet/doubletdoublet
Overlap geneLOC100042784
Upstream geneCreb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1, Syt13
Downstream geneTrp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4, Ext2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K02.bB6Ng01-314K02.g
ACCGA105505GA105506
length6401,141
definitionB6Ng01-314K02.b B6Ng01-314K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,980,092 - 92,980,731)(92,813,636 - 92,814,779)
sequence
gaattcattctgtaaaccaggctggtcttgaactctcatagatctgcctg
cctctgcctcacctctgctaaggttaaaggtgtgagtcaccaccccactg
cctcattggctgatgtgtggtcgttccctttttgggttcattgtaaagga
agcagaacattagcatctgtttctccttgtgctgatgtttggtttctctt
ggcctcataggaaaaggaactttgctcacatatgagataaacacatgttt
aactttgtaggagatgactacaatcctttgaacttgagggaaaattgctc
tttttcaacacacaatctcgagtcaagactctgatgactgctccacacac
ttaaaaaagattattctgctgcaattacatgcagctctgttggttgtgtt
tttgaaacccatgattcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttctccttctccttctccttctcctt
ctccttctccttctccttctccttctccttcttcttcttcttcttcttct
ttcttcctcttcctcctcctcctcctcctcctcctcttcttcttcttctt
tcttcctcttcctcctcctcctcctcctccacctcctcct
gaattctgtggctgggggtccatcactgctggtatactgcacatagacgg
ccactgtgtcagccagaaggtcgtcactctgcccatccaggatgatgctg
aggcagggcgactgacggatgcgctccaccaggtcttctctcagtgcccg
ggcgatgtgatggataaggatctggcagtccccctcattcatatactggt
ccaccaccttgagctcgcacttccgcagcagctctgccaggggccggaag
tcgaggtagggcctcccctccagcgccaggtggtaggcggtgttgaagag
cagggtcatgttgcggcacatctcctcagtcttctccgggtgcatgcgca
gtttgtacagctgcaggcatttcttgtgcaggttgctctggctgtgcagc
ttgatggtgtggatcttaaactgcttggagccgatgatgaaagcggaagt
gcgtgaggactgaaccgtgtactggcggcacacgtgacaccacatctcat
tcagggtcggggagtaccgtaggaaccagaactttttcagccactcctgc
ttgaagcgccggatgcggcgtcctgtggcagaggacatcttggagggttc
atcggttgccgtcatcacgtcgttggagacagattcatctgcagaatcca
cttcctggtcatcgtcctccatgatggcggggccggagaccatactctct
gaggctggaaaataagaggggaaggagaagttcgcgtgggctgttgacag
cacagactcagcaagggcctctgagggagagcgggccccacagagatgga
agcccagcctggagttgagtcaagggtaactctactctccacagtgaggt
tacctccccatgagttgcccatggtgttcttggacgctactcactatgct
ccatgctgcctgcacctgagctcagttttgatttgtgggtgcttctgcgg
gtggaatgtttagagagcagaatgtttgatgtcacacattcagttacact
ggaggacctggctctggaaatgcccacctgctatgttcaagggtgagcat
gtggctcttaactgcgggcagcctcgaatattgagcaatgttggctttta
cgtccaccctagcaatctgaggatgcctgaaaggggaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_92980092_92980731
seq2: B6Ng01-314K02.b_48_687 (reverse)

seq1  AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAAGAAGAAGA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGTGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAAGAAGAAGA  50

seq1  AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAAGAAGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAAGAAGAAGAA  100

seq1  GAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGG  150

seq1  AGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  200

seq1  AAGAAGAAGAAGAAGAAGAAGAAGAATCATGGGTTTCAAAAACACAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGAAGAATCATGGGTTTCAAAAACACAACCA  250

seq1  ACAGAGCTGCATGTAATTGCAGCAGAATAATCTTTTTTAAGTGTGTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCTGCATGTAATTGCAGCAGAATAATCTTTTTTAAGTGTGTGGAG  300

seq1  CAGTCATCAGAGTCTTGACTCGAGATTGTGTGTTGAAAAAGAGCAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCAGAGTCTTGACTCGAGATTGTGTGTTGAAAAAGAGCAATTTT  350

seq1  CCCTCAAGTTCAAAGGATTGTAGTCATCTCCTACAAAGTTAAACATGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAAGTTCAAAGGATTGTAGTCATCTCCTACAAAGTTAAACATGTGT  400

seq1  TTATCTCATATGTGAGCAAAGTTCCTTTTCCTATGAGGCCAAGAGAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCATATGTGAGCAAAGTTCCTTTTCCTATGAGGCCAAGAGAAACC  450

seq1  AAACATCAGCACAAGGAGAAACAGATGCTAATGTTCTGCTTCCTTTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCAGCACAAGGAGAAACAGATGCTAATGTTCTGCTTCCTTTACAA  500

seq1  TGAACCCAAAAAGGGAACGACCACACATCAGCCAATGAGGCAGTGGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAAAAAGGGAACGACCACACATCAGCCAATGAGGCAGTGGGGTG  550

seq1  GTGACTCACACCTTTAACCTTAGCAGAGGTGAGGCAGAGGCAGGCAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCACACCTTTAACCTTAGCAGAGGTGAGGCAGAGGCAGGCAGATC  600

seq1  TATGAGAGTTCAAGACCAGCCTGGTTTACAGAATGAATTC  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAGTTCAAGACCAGCCTGGTTTACAGAATGAATTC  640

seq1: chr2_92813636_92814779
seq2: B6Ng01-314K02.g_66_1206

seq1  GAATTCTGTGGCTGGGGGTCCATCACTGCTGGTATACTGCACATAGACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCTGGGGGTCCATCACTGCTGGTATACTGCACATAGACGG  50

seq1  CCACTGTGTCAGCCAGAAGGTCGTCACTCTGCCCATCCAGGATGATGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGTCAGCCAGAAGGTCGTCACTCTGCCCATCCAGGATGATGCTG  100

seq1  AGGCAGGGCGACTGACGGATGCGCTCCACCAGGTCTTCTCTCAGTGCCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGCGACTGACGGATGCGCTCCACCAGGTCTTCTCTCAGTGCCCG  150

seq1  GGCGATGTGATGGATAAGGATCTGGCAGTCCCCCTCATTCATATACTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGATGTGATGGATAAGGATCTGGCAGTCCCCCTCATTCATATACTGGT  200

seq1  CCACCACCTTGAGCTCGCACTTCCGCAGCAGCTCTGCCAGGGGCCGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCTTGAGCTCGCACTTCCGCAGCAGCTCTGCCAGGGGCCGGAAG  250

seq1  TCGAGGTAGGGCCTCCCCTCCAGCGCCAGGTGGTAGGCGGTGTTGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGTAGGGCCTCCCCTCCAGCGCCAGGTGGTAGGCGGTGTTGAAGAG  300

seq1  CAGGGTCATGTTGCGGCACATCTCCTCAGTCTTCTCCGGGTGCATGCGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCATGTTGCGGCACATCTCCTCAGTCTTCTCCGGGTGCATGCGCA  350

seq1  GTTTGTACAGCTGCAGGCATTTCTTGTGCAGGTTGCTCTGGCTGTGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTACAGCTGCAGGCATTTCTTGTGCAGGTTGCTCTGGCTGTGCAGC  400

seq1  TTGATGGTGTGGATCTTAAACTGCTTGGAGCCGATGATGAAAGCGGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTGTGGATCTTAAACTGCTTGGAGCCGATGATGAAAGCGGAAGT  450

seq1  GCGTGAGGACTGAACCGTGTACTGGCGGCACACGTGACACCACATCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGGACTGAACCGTGTACTGGCGGCACACGTGACACCACATCTCAT  500

seq1  TCAGGGTCGGGGAGTACCGTAGGAACCAGAACTTTTTCAGCCACTCCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTCGGGGAGTACCGTAGGAACCAGAACTTTTTCAGCCACTCCTGC  550

seq1  TTGAAGCGCCGGATGCGGCGTCCTGTGGCAGAGGACATCTTGGAGGGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCGCCGGATGCGGCGTCCTGTGGCAGAGGACATCTTGGAGGGTTC  600

seq1  ATCGGTTGCCGTCATCACGTCGTTGGAGACAGATTCATCTGCAGAATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTTGCCGTCATCACGTCGTTGGAGACAGATTCATCTGCAGAATCCA  650

seq1  CTTCCTGGTCATCGTCCTCCATGATGGCGGGGCCGGAGACCATACTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTCATCGTCCTCCATGATGGCGGGGCCGGAGACCATACTCTCT  700

seq1  GAGGCTGGAAAATAAGAGGGGAAGGAGAAGTTCGCGTGGGCTGTTGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGGAAAATAAGAGGGGAAGGAGAAGTTCGCGTGGGCTGTTGACAG  750

seq1  CACAGACTCAGCAAGGGCCTCTGAGGGAGAGCGGGCCCCACAGAGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTCAGCAAGGGCCTCTGAGGGAGAGCGGGCCCCACAGAGATGGA  800

seq1  AGCCCAGCCTGGAGTTGAGTCAAGGGTAACTCTACTCTCCACAGTGAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCTGGAGTTGAGTCAAGGGTAACTCTACTCTCCACAGTGAGGT  850

seq1  TACCTCCCCATGAGTTGCCCATGGTGTTCTTGGACGCTACTCACTATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCCATGAGTTGCCCATGGTGTTCTTGGACGCTACTCACTATGCT  900

seq1  CCATGCTGCCTGCACCTGAGCTCAGTTTTGATTTGTGGGTGCTTCTG-GG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCATGCTGCCTGCACCTGAGCTCAGTTTTGATTTGTGGGTGCTTCTGCGG  950

seq1  GTGGAATGTTTTAGAAGAG-GCAGAATGTTTGATGTCACACATTCAGGTT  998
      |||||||||||    |||| |||||||||||||||||||||||||| |||
seq2  GTGGAATGTTT----AGAGAGCAGAATGTTTGATGTCACACATTCA-GTT  995

seq1  ACACTGGAGGACCTGGCTCTGG-AATGCCCACC-GCTATGGTC-AGGGTG  1045
      |||||||||||||||||||||| |||||||||| |||||| || ||||||
seq2  ACACTGGAGGACCTGGCTCTGGAAATGCCCACCTGCTATGTTCAAGGGTG  1045

seq1  AGCATGTGGCTCTTAACTGCGGGCAGCCTCG-ATATTGAGGCAAAATG-T  1093
      ||||||||||||||||||||||||||||||| ||||||||    |||| |
seq2  AGCATGTGGCTCTTAACTGCGGGCAGCCTCGAATATTGAG---CAATGTT  1092

seq1  GGTTTTTACGTCCACCCCAACCCATTCTGAGGGTGGCTGAGAAGGGAAAC  1143
      || |||||||||||||| |   || ||||||| || |||| | |||||||
seq2  GGCTTTTACGTCCACCCTA--GCAATCTGAGGATGCCTGAAAGGGGAAAC  1140

seq1  C  1144
      |
seq2  C  1141